Basic Information | |
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Taxon OID | 3300034695 Open in IMG/M |
Scaffold ID | Ga0372840_007243 Open in IMG/M |
Source Dataset Name | Seawater microbial communities from the Northeast subarctic Pacific Ocean - P26_June_2012_500m |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 2969 |
Total Scaffold Genes | 6 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 4 (66.67%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
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Not Available | (Source: ) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater → Marine Microbial Communities From The Southern Atlantic Ocean Transect To Study Dissolved Organic Matter And Carbon Cycling |
Source Dataset Sampling Location | ||||||||
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Location Name | Pacific Ocean: Gulf of Alaska | |||||||
Coordinates | Lat. (o) | 50.0 | Long. (o) | -145.0 | Alt. (m) | Depth (m) | 500 | Location on Map |
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Family | Category | Number of Sequences | 3D Structure? |
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F057688 | Metagenome / Metatranscriptome | 136 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0372840_007243_920_1243 | F057688 | GGAGG | MKTKDKQHFIIIGYELGAGLAEGNLHETVDVVCDCLHPDNTVDPIIDELITKKDIKELIEQQFIKRRDDCYIANPLLLYCVDDDYFLDEQRHAAQIKAAKRYYGILL |
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