Basic Information | |
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Taxon OID | 7000000684 Open in IMG/M |
Scaffold ID | SRS019582_WUGC_scaffold_35352 Open in IMG/M |
Source Dataset Name | Human stool microbial communities from NIH, USA - visit 2, subject 763597684 |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | Baylor College of Medicine, J. Craig Venter Institute (JCVI), Washington University in St. Louis |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 1125 |
Total Scaffold Genes | 3 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 2 (66.67%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii | (Source: IMG/M) |
Source Dataset Ecosystem |
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Host-Associated → Human → Digestive System → Large Intestine → Fecal → Human → Human Microbial Communities From The National Institute Of Health, Usa, Hmp Production Phase |
Source Dataset Sampling Location | ||||||||
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Location Name | National Institutes of Health, USA | |||||||
Coordinates | Lat. (o) | Long. (o) | Alt. (m) | Depth (m) | Location on Map | |||
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F090514 | Metagenome | 108 | N |
Protein ID | Family | RBS | Sequence |
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SRS019582_WUGC_scaffold_35352__gene_42728 | F090514 | N/A | MNLRIHALKKASRQRPGVKIAAARFFSILYYPFCAKRSSFFQQNVQPRGNFFANRPIFVYFADILPRLTGAKWFVILLTIVPAGSRARAGSSLPLSPASIFFLKQTPRRGLPLAWNAGAGSFLFCG |
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