Sample 2019105003

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

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Sample 2019105003

2019105003: Viral communities in wastewater treatment process (IF)

Overview

Basic Information
IMG/M Taxon OID	2019105003 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0045482 \| Gp0051374 \| Ga0011172
Sample Name	Viral communities in wastewater treatment process (IF)
Sequencing Status	Permanent Draft
Sequencing Center	University of Illinois, Urbana-Champaign
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	24210189
Sequencing Scaffolds	13
Novel Protein Genes	13
Associated Families	12

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	9
All Organisms → Viruses → unclassified bacterial viruses → Methanosarcina virus MetMV	1
All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfurellales → unclassified Desulfurellales → Desulfurellales bacterium	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Wastewater Viral Communities From Wastewater Treatment Facility In Singapore
Type	Engineered
Taxonomy	Engineered → Wastewater → Nutrient Removal → Dissolved Organics (Anaerobic) → Unclassified → Wastewater → Wastewater Viral Communities From Wastewater Treatment Facility In Singapore

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	Unclassified
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline)

Location Information
Location	Singapore: Singapore
Coordinates	Lat. (^o)	1.332	Long. (^o)	103.756	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F008183	Metagenome / Metatranscriptome	337	Y
F021262	Metagenome / Metatranscriptome	219	N
F033445	Metagenome / Metatranscriptome	177	N
F037115	Metagenome / Metatranscriptome	168	N
F039036	Metagenome	164	Y
F043390	Metagenome / Metatranscriptome	156	N
F049316	Metagenome / Metatranscriptome	147	N
F060712	Metagenome / Metatranscriptome	132	Y
F062245	Metagenome / Metatranscriptome	131	Y
F071272	Metagenome / Metatranscriptome	122	N
F078253	Metagenome	116	Y
F078624	Metagenome / Metatranscriptome	116	N

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
VirWwIF_contig02331	Not Available	1037	Open in IMG/M
VirWwIF_contig02466	Not Available	538	Open in IMG/M
VirWwIF_contig06628	Not Available	893	Open in IMG/M
VirWwIF_contig07669	All Organisms → Viruses → unclassified bacterial viruses → Methanosarcina virus MetMV	762	Open in IMG/M
VirWwIF_contig08585	Not Available	531	Open in IMG/M
VirWwIF_contig09329	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	825	Open in IMG/M
VirWwIF_contig09818	Not Available	501	Open in IMG/M
VirWwIF_contig11299	Not Available	896	Open in IMG/M
VirWwIF_contig18545	Not Available	506	Open in IMG/M
VirWwIF_contig38220	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfurellales → unclassified Desulfurellales → Desulfurellales bacterium	635	Open in IMG/M
VirWwIF_contig45814	Not Available	592	Open in IMG/M
VirWwIF_contig51960	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	3620	Open in IMG/M
VirWwIF_contig52069	Not Available	606	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
VirWwIF_contig02331	IF_224220	F049316	TIVLDKEADRKSKIIAEFTGKTLSAIYREALDMYFSHFVNNDLLSEVNEFLDKLYWQYKIDNPHIFTAIQFGNLADAAVMIAEAVKKLPQDPEAQKLIDEGMRLISILSK
VirWwIF_contig02466	IF_486400	F078253	RIENPEDKDGMWYTKDGILRKKIHILCPDGIAKDFPMPFNPIHKKDGHIWQSAGKNVENMNQWFTASDAINLFNNGFKLFEFETTMFQELENEILFCRKGVVKQREIPLENIWDIASVIGRP
VirWwIF_contig06628	IF_201880	F062245	MTVCLETIIQRWNGQDGDQVTITDAREGSTFHAVDTGRKYVFHDGGWVEDLRDIYVVQHV
VirWwIF_contig07669	IF_509760	F037115	MRVKHGSDTYPEIIVKSAGKTQVRYDIEETEFEEMDGTKRACYDFSYVAIEGELTRAKIIDAIIADEIGNKDAELALINNELASPGTAEYAAYQALRTHAKEIATEV
VirWwIF_contig08585	IF_630080	F078624	MKLCIHVRPRDDGQGWAIDVYDGRRAWTKTHLGESPLNKAEAHRLAHKLRDPKFYTARTKRAVNSGGVR
VirWwIF_contig09329	IF_209900	F078624	MKLCIHVRPRDDKQGWAVDVFDGRRAWTKTHLGESPLSKAEAHRLAHKLRDPKFYTARTKRAVNSGGAR
VirWwIF_contig09818	IF_127940	F039036	VTTFQIIIRKIGVYYSKPIWSFIRNLVFWIGHLNKIGAVREDMKMLKKLTLEDFMKKFLWQEDVVGDWTPWVMTILCNDFTDDCDGAAELAKWWFKEHGVEADILNLYNSKEGHTVCVAEGIMVSNGNVIKMNTDRDSVLKYFNGEYDTV
VirWwIF_contig11299	IF_735700	F033445	ADAGKIVVELERGRFCEQEVVQYEVSVKELSIQIESLKTQVETMSKKFDETLKQLDTERKIADEKDKARLEEIKAAGKPQWTMLFGGFGAGALLIGALVLLL
VirWwIF_contig18545	IF_331660	F071272	ETAAKARVYKAAVDQLAESMAGGAWQDGPAPKDGSWILGLFHGLPYVVAYDSWEVGGETLPDWSGSPPDGYESGWCLAGDNLHVMDKDEPEKWARIIHPNRHMPASWDGPGNRS
VirWwIF_contig38220	IF_146640	F060712	MTTPTDIANRALQVIGTRTTVTDAELANNSTNEAIQINLAYDTVRKRLIRMAPWNCVLRTANLVYITSLPGTPENTSTSQVGQPWVPGLPLHRGLMNTNTRWIVSTQRGFRR
VirWwIF_contig45814	IF_103100	F021262	MSKKYYIKFTTGKELTGTAKEIATQLRNESRLLAITPRKYAKLVAKSYEMSTGMKLRTWTYNSFVKSLGKSLMVMEFKEVK
VirWwIF_contig51960	IF_448440	F008183	VAFDDADFDPVKYGVLWQKVQDMDKKVDKMEHQLEQLLELANRSKGGLWFGMTIASAVSGIIGFVISHWKG
VirWwIF_contig52069	IF_516010	F043390	QHLFSCGDENGLHGKNEDSQKVIALTLTAEQLEVIDGALEMYCMVLAEQNDPHLKYATNAHEAIYNVLESNFGVEA

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