NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Sample 3300000361

3300000361: Alkaline brine water microbial communities from Soda crystalizer, Kulunda Steppe, Russia - 6KL_011_BRINE



Overview

Basic Information
IMG/M Taxon OID3300000361 Open in IMG/M
GOLD Reference
(Study | Sequencing Project | Analysis Project)		Gs0063439 | Gp0054155 | Ga0026667
Sample NameAlkaline brine water microbial communities from Soda crystalizer, Kulunda Steppe, Russia - 6KL_011_BRINE
Sequencing StatusDraft
Sequencing CenterDOE Joint Genome Institute (JGI)
Published?N
Use PolicyOpen

Dataset Contents
Total Genome Size246640645
Sequencing Scaffolds27
Novel Protein Genes27
Associated Families4

Dataset Phylogeny
Taxonomy GroupsNumber of Scaffolds
All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Halorubraceae → Halorubrum → unclassified Halorubrum → Halorubrum sp. 48-1-W2
All Organisms → Viruses → Predicted Viral3
Not Available18
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kirjokansivirales → Shortaselviridae → unclassified Shortaselviridae → environmental Halophage eHP-281
All Organisms → Viruses → unclassified bacterial viruses → environmental samples → environmental Halophage eHP-111
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kirjokansivirales → Haloferuviridae2

Ecosystem and Geography

Ecosystem Assignment (GOLD)
NameAlkaline Sediment Microbial Communities From Soda Lakes And Soda Solonchak Soils
TypeEnvironmental
TaxonomyEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Alkaline → Sediment → Alkaline Brine Water → Alkaline Sediment Microbial Communities From Soda Lakes And Soda Solonchak Soils

Alternative Ecosystem Assignments
Environment Ontology (ENVO)Unclassified
Earth Microbiome Project Ontology (EMPO)Free-living → Saline → Hypersaline (saline)

Location Information
LocationRussia: Kulunda Steppe
CoordinatesLat. (o)51.64Long. (o)79.73Alt. (m)N/ADepth (m)N/A
Location on Map
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Associated Families

FamilyCategoryNumber of Sequences3D Structure?
F003128Metagenome506Y
F016383Metagenome / Metatranscriptome247Y
F066493Metagenome126Y
F079661Metagenome115Y

Associated Scaffolds

ScaffoldTaxonomyLengthIMG/M Link
SL_6KL_011_BRINEDRAFT_1011220All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Halorubraceae → Halorubrum → unclassified Halorubrum → Halorubrum sp. 48-1-W3715Open in IMG/M
SL_6KL_011_BRINEDRAFT_1029011All Organisms → Viruses → Predicted Viral1767Open in IMG/M
SL_6KL_011_BRINEDRAFT_1030295Not Available1692Open in IMG/M
SL_6KL_011_BRINEDRAFT_1031185All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kirjokansivirales → Shortaselviridae → unclassified Shortaselviridae → environmental Halophage eHP-281641Open in IMG/M
SL_6KL_011_BRINEDRAFT_1031431All Organisms → Viruses → unclassified bacterial viruses → environmental samples → environmental Halophage eHP-111629Open in IMG/M
SL_6KL_011_BRINEDRAFT_1034557All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Halorubraceae → Halorubrum → unclassified Halorubrum → Halorubrum sp. 48-1-W1485Open in IMG/M
SL_6KL_011_BRINEDRAFT_1038153All Organisms → Viruses → Predicted Viral1351Open in IMG/M
SL_6KL_011_BRINEDRAFT_1038491All Organisms → Viruses → Predicted Viral1340Open in IMG/M
SL_6KL_011_BRINEDRAFT_1046445All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kirjokansivirales → Haloferuviridae1109Open in IMG/M
SL_6KL_011_BRINEDRAFT_1054412Not Available947Open in IMG/M
SL_6KL_011_BRINEDRAFT_1058694Not Available878Open in IMG/M
SL_6KL_011_BRINEDRAFT_1059726Not Available863Open in IMG/M
SL_6KL_011_BRINEDRAFT_1066426Not Available774Open in IMG/M
SL_6KL_011_BRINEDRAFT_1067713Not Available760Open in IMG/M
SL_6KL_011_BRINEDRAFT_1074777All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kirjokansivirales → Haloferuviridae689Open in IMG/M
SL_6KL_011_BRINEDRAFT_1075127Not Available686Open in IMG/M
SL_6KL_011_BRINEDRAFT_1077044Not Available669Open in IMG/M
SL_6KL_011_BRINEDRAFT_1078344Not Available659Open in IMG/M
SL_6KL_011_BRINEDRAFT_1080845Not Available639Open in IMG/M
SL_6KL_011_BRINEDRAFT_1082673Not Available626Open in IMG/M
SL_6KL_011_BRINEDRAFT_1084874Not Available610Open in IMG/M
SL_6KL_011_BRINEDRAFT_1085049Not Available609Open in IMG/M
SL_6KL_011_BRINEDRAFT_1085456Not Available606Open in IMG/M
SL_6KL_011_BRINEDRAFT_1086137Not Available602Open in IMG/M
SL_6KL_011_BRINEDRAFT_1089383Not Available580Open in IMG/M
SL_6KL_011_BRINEDRAFT_1090585Not Available573Open in IMG/M
SL_6KL_011_BRINEDRAFT_1094555Not Available550Open in IMG/M

Sequences

Scaffold IDProtein IDFamilySequence
SL_6KL_011_BRINEDRAFT_1011220SL_6KL_011_BRINEDRAFT_10112207F066493MSQREWHDGVVDVADELVKEYSADGAIDRLQSRRQTSNEQLQARCTEAIAYIRREVMDDT
SL_6KL_011_BRINEDRAFT_1029011SL_6KL_011_BRINEDRAFT_10290112F079661MSTTIQIPTDLRKRLRDERLPHESNYGDTIQRLLGDSTGGQLWTEQEIRDMVQRELETVQRH*
SL_6KL_011_BRINEDRAFT_1030295SL_6KL_011_BRINEDRAFT_10302956F066493MSQREWHDGVVDVADELVKEYSADGAIERLQSRRQTSNEQLQARCNEAIAYIRREVLADE
SL_6KL_011_BRINEDRAFT_1031185SL_6KL_011_BRINEDRAFT_10311853F079661MSDTTIQIPTDLRKRLKDERLPHESNYGDTIERLLGDSTGGQLWTEQEIQDVVDRRIESYQRH*
SL_6KL_011_BRINEDRAFT_1031431SL_6KL_011_BRINEDRAFT_10314316F003128MKVEVEVSDVNEKKADHRGRVTLGSEYAGKTVTVAVVEVDD*
SL_6KL_011_BRINEDRAFT_1034557SL_6KL_011_BRINEDRAFT_10345576F066493MTESRREWHDGVVDVADELVKEYSADGAIERLQSRRQTSNEKLQARCNEAIAYI
SL_6KL_011_BRINEDRAFT_1038153SL_6KL_011_BRINEDRAFT_10381533F079661MSDTTIQIPTDLRKRLKEERLPHESNYGDTIQRLLGDSTGGQLWTEQEITDVVDRRIERYQR*
SL_6KL_011_BRINEDRAFT_1038491SL_6KL_011_BRINEDRAFT_10384913F079661MSTTIQIPESVRDDLRDERLPHESNYGDTIQRLLGDSTGGQLWTEQEITDVVDRRIERYQR*
SL_6KL_011_BRINEDRAFT_1046445SL_6KL_011_BRINEDRAFT_10464452F079661MSKTTIELPETVRDDLRDERLPHESNYGDTVRRLLNDATGAQLWTEAEIRDMARDEAESLARGGR*
SL_6KL_011_BRINEDRAFT_1054412SL_6KL_011_BRINEDRAFT_10544121F079661MTEKTTIEVSIDVRDRLKDERLPHESNYSNTIRRLLSDDTGGQIWTEAEIRDMARDEAESLARGGR*
SL_6KL_011_BRINEDRAFT_1058694SL_6KL_011_BRINEDRAFT_10586941F016383MYNKNEQFNYYFNNVPGSGLCRNNLVYTSLIDQKKDTFCQWFYNDKFYHKDQNHILDPSL
SL_6KL_011_BRINEDRAFT_1059726SL_6KL_011_BRINEDRAFT_10597262F079661MSDTTIQIPTDLRKRLKDERLPHESNYGETIGRLLGDSTGGKLWTEQEIKDVVDRRIESYQRH*
SL_6KL_011_BRINEDRAFT_1066426SL_6KL_011_BRINEDRAFT_10664262F079661MSTTIQIPESVRDDLRDERLPHESNYGDTIQRLLGDSTGGQLWTEQEITDVVDXRIERYQR*
SL_6KL_011_BRINEDRAFT_1067713SL_6KL_011_BRINEDRAFT_10677131F066493MSDAREFDTSVVDVADELVQRHGPSGAIDRLQRRRQTSNDELQARCTEAIAWIRREVMDDT*
SL_6KL_011_BRINEDRAFT_1074777SL_6KL_011_BRINEDRAFT_10747773F079661MSKTTIELPETIRDDLRDERLPHESNYGDTIARLLDSDDGGQLWTEAEIRDMARDEAESLARGGR*
SL_6KL_011_BRINEDRAFT_1075127SL_6KL_011_BRINEDRAFT_10751273F079661MSDTTIQLPESTRDKLKDERLPHESNYGDTIERLLGDSTGGQLWTEQEITDVVDRRIELYQR*
SL_6KL_011_BRINEDRAFT_1077044SL_6KL_011_BRINEDRAFT_10770442F079661MNANARHSTSITMSNTTIQIPERLRERLKDERLPHESNYGDTIERLLGDSTGGQLWTEQEIKDLVDQRIERVSQSR*
SL_6KL_011_BRINEDRAFT_1078344SL_6KL_011_BRINEDRAFT_10783441F079661MSTTIQIPTDLRKRLKDERLPHESNYGETIERLLGDSTGGKLWTEQEIKDVVDRRIESYQRH*
SL_6KL_011_BRINEDRAFT_1080845SL_6KL_011_BRINEDRAFT_10808453F079661MSDTTIQIPESVRDDLRDERLPHESNYGDTIQRLLGDSTGGQLWTEQEITDVVDRRIERYQR*
SL_6KL_011_BRINEDRAFT_1082673SL_6KL_011_BRINEDRAFT_10826732F079661MSDTTIQIPTDLRKRLKDERLPHESNYGDTIQRLLGDSTGGQLWTEQEIIDVVDRRIERYQR*
SL_6KL_011_BRINEDRAFT_1084874SL_6KL_011_BRINEDRAFT_10848742F079661MTKTTIELPESTRDKLKDERLPHESNYGDTIERLLGDSTGGQLWTEREITDVVDRRIELYQR*
SL_6KL_011_BRINEDRAFT_1085049SL_6KL_011_BRINEDRAFT_10850491F079661MSDTTIQIPTDLRNRLKDERLPNESNYGETIERLLGDSTRGQLWTEQEIQDVVDRRIESYQRH*
SL_6KL_011_BRINEDRAFT_1085456SL_6KL_011_BRINEDRAFT_10854562F079661MGDTTIQIPESVRDELRDERLPHESNYADTIQRLLGDSTGGQLWTEQELSDLIDQRIERVSQSR*
SL_6KL_011_BRINEDRAFT_1086137SL_6KL_011_BRINEDRAFT_10861371F079661MSTTIQIPESVRDDLKDERLPHESNYGDTIERLLGDPAGGQLWTEQEIRDMIQRELETVQRH*
SL_6KL_011_BRINEDRAFT_1089383SL_6KL_011_BRINEDRAFT_10893832F079661MSQDTTIQIPTDLRKRLKDERLPHESNYGDTIERLLGDPAGGQLWTEQEIRDMIQRELETLQRH*
SL_6KL_011_BRINEDRAFT_1090585SL_6KL_011_BRINEDRAFT_10905851F079661MSDTTIQLPESTRDKLKDERLPHESNYGDTINRLLGSSTGGQLWTEQEIKDLVDQRIERVSQSR*
SL_6KL_011_BRINEDRAFT_1094555SL_6KL_011_BRINEDRAFT_10945552F079661MSTTIQIPESVRDDLRDERLPXESNYGDTIQRLLGDSTGGQLWTEQEIIDVVDRRIELYQR*VIISTGVMKAQIM
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