NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Sample 3300002079

3300002079: CSTRmetagenomics



Overview

Basic Information
IMG/M Taxon OID3300002079 Open in IMG/M
GOLD Reference
(Study | Sequencing Project | Analysis Project)		Gs0095583 | Gp0060320 | Ga0016756
Sample NameCSTRmetagenomics
Sequencing StatusPermanent Draft
Sequencing Center
Published?N
Use PolicyOpen

Dataset Contents
Total Genome Size89693915
Sequencing Scaffolds15
Novel Protein Genes17
Associated Families14

Dataset Phylogeny
Taxonomy GroupsNumber of Scaffolds
Not Available2
All Organisms → cellular organisms → Bacteria8
All Organisms → Viruses → Predicted Viral1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales1
All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division TA06 → candidate division TA06 bacterium 34_1091
All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Spirochaetales → unclassified Spirochaetales → Spirochaetales bacterium1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
NameWastewater Treatment Plant Microbial Communities From Luxembourg
TypeEngineered
TaxonomyEngineered → Wastewater → Unclassified → Unclassified → Unclassified → Wastewater Treatment Plant → Wastewater Treatment Plant Microbial Communities From Luxembourg

Alternative Ecosystem Assignments
Environment Ontology (ENVO)Unclassified
Earth Microbiome Project Ontology (EMPO)Free-living → Non-saline → Water (non-saline)

Location Information
LocationBelvaux, Luxembourg
CoordinatesLat. (o)49.507864Long. (o)5.943557Alt. (m)N/ADepth (m)N/A
Location on Map
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Associated Families

FamilyCategoryNumber of Sequences3D Structure?
F011593Metagenome / Metatranscriptome289Y
F021489Metagenome / Metatranscriptome218N
F023356Metagenome / Metatranscriptome210Y
F029455Metagenome / Metatranscriptome188Y
F030486Metagenome / Metatranscriptome185Y
F045118Metagenome / Metatranscriptome153N
F047964Metagenome / Metatranscriptome149N
F048287Metagenome / Metatranscriptome148N
F049316Metagenome / Metatranscriptome147N
F064732Metagenome / Metatranscriptome128Y
F066555Metagenome / Metatranscriptome126Y
F073245Metagenome / Metatranscriptome120Y
F078878Metagenome / Metatranscriptome116Y
F104682Metagenome / Metatranscriptome100N

Associated Scaffolds

ScaffoldTaxonomyLengthIMG/M Link
CSTR_1009099Not Available1357Open in IMG/M
CSTR_1009267All Organisms → cellular organisms → Bacteria1075Open in IMG/M
CSTR_1019028All Organisms → Viruses → Predicted Viral1156Open in IMG/M
CSTR_1019064All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales6454Open in IMG/M
CSTR_1022109All Organisms → cellular organisms → Bacteria2470Open in IMG/M
CSTR_1022359All Organisms → cellular organisms → Bacteria1044Open in IMG/M
CSTR_1022360All Organisms → cellular organisms → Bacteria1119Open in IMG/M
CSTR_1022430All Organisms → cellular organisms → Bacteria2967Open in IMG/M
CSTR_1022636All Organisms → cellular organisms → Bacteria8854Open in IMG/M
CSTR_1024451All Organisms → cellular organisms → Bacteria1352Open in IMG/M
CSTR_1025975All Organisms → cellular organisms → Bacteria1309Open in IMG/M
CSTR_1026402All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division TA06 → candidate division TA06 bacterium 34_1091574Open in IMG/M
CSTR_1028711All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Spirochaetales → unclassified Spirochaetales → Spirochaetales bacterium7400Open in IMG/M
CSTR_1028770All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium1270Open in IMG/M
CSTR_1030708Not Available1035Open in IMG/M

Sequences

Scaffold IDProtein IDFamilySequence
CSTR_1008147CSTR_10081472F078878LSSIVLKIPYESQSFHAALTDATLRDRVQEWVAAAVTLDDAVYIPLRTDWMPNGPRRTADGVEVLLAGRWPPEVDAETGPRVSAAIFGRVWDTLCNATPADELEDIATCGLSGVNEEQTGNEVLEEAPAVIHIHATPVNHVDGW
CSTR_1009099CSTR_10090992F064732MPKVSEYKWKDTEAEAEAATAAARERCTMPLVQSAERHVRFPSSPMAPGQYIAATATRSTGQLDHPEDTELGNHPFLGLL*
CSTR_1009267CSTR_10092672F011593MTSSLAAPPWCRGCPDPIYDNRRGEWDWYCRQHSPTGIRCSNVAVLRERCYRVREYFAKKEASK*
CSTR_1019028CSTR_10190282F066555MKGKLRKEFIERMEAVLYGDIVEEEVEDLIHDFCDEIENRLLDVCAELKRIKGLREIDAIRNAVEELVTDLW*
CSTR_1019064CSTR_10190648F030486RYVALAQSRGGACFCTRGAVQDYAVITLFSRWQKP*
CSTR_1022109CSTR_10221092F023356MSENSLKKAVLESRVSAAEAEVMSTELEKSKVITLRVEEPLFKAIEAQAELWNVKPAETIRRVLRFYFLPVALELELRGESEKFWKGEFTPEAVGEYMVFLLETTEKIRSSALFLSREAVKLSEATEGKLSEALEEEREGAET*
CSTR_1022109CSTR_10221093F048287MYNKAVLLQTLQQVRLKVIDTLKLMLSDYEVSPESSLRVQPASYEVATGEKVEYPLFRNEAGTFYGSKAYLNTENWNLTLKPLPAGTRGVGAFLQFSVPKNYYGSNYFSVGEAGTRAALKKVEGELVQNGVFTNLEEAELSRVDTFKNIEPEEPFSSYFSLFSLLKARRAQQRGYGTTFLVSNSSQEFCVYDKLQEMREHGLETSELPETMRFEHRALKKEKVRSLYGFTSVSELFHGGYEVVKEKQVESWKNSLFSFSAEEVVVLGSKQLEQEMKVFQERFGSNWFQYFLRSYGAYSLAKFAGKEVVRAALENLNSERTKVWRTMKLLEEAERELLVLKQEEGSSKTLGELYEELRGKVCELAGRN*
CSTR_1022359CSTR_10223593F045118AELSRVDTFKNIEPEEPFSSYFSLFSLLRARRAQQRGYGTTFLLSNSSQEFCIYDKLQEMREHGEETSELPETMRFEHRALKKEKVSSLYGFTKVKELFHGGYEVVKEKQVESWKNSLFSFSAEEVLVLGSKQLEQEMKVFQEKFGSNWFQYFLRSYGAYSLAKFAGKEVVRAALENLNSERTKVWRTMKLLEEAERELLVLKQEEGSSKTLGELYEELREKVCGTAERN*
CSTR_1022360CSTR_10223601F045118AGTRAALKKVEGELDQSGVFTNLEEAELSRVDTFKNIEPEEPFSSYFSLFSLLKARKAQQRGYGTTFLVSNSSQEFCIYDKLQEMREHDLETSNLPETMRFEHRALKKEKVRSLYGFTRVSELFHGGYEVVKEKQVESWKNSLFSFSTEEVVVLGSKQLEQEMKVFQEKFGSNWFQYFLRSYGAYSLAKFAGKEVVRAALENLNSERTKVWRTMKLLEEAERELLVLKQEEGSSKTLGELYEELRGKVCELAGRN*
CSTR_1022430CSTR_10224307F048287KVEFPLFRNEAGTFYGSKAYLNTENWNLTLKPLPAGNRGTGAFLQFSVPKNYYGSNYFSVGEAGTRASLKKVEGELAENGVLTNLEEAELSRVDTFKNIEPEEPFSSYFSLFSLLKARKAQQRGYGTTFLVSNSSQEFCIYDKLQEMREHGEETSELPETMRFEHRALTKRKVSSLYGFTRAGELFHGGYEVVREKQLESWKSSLFSFSAEEVVVLGSKQLEQEMRFFQEKFGANWFQYFLKSYGAYSLAKFAGKEVVRNALENLNSERTKVWRTMKLLEEAERELLVLKQEEGSSKTLGELYEELRGKVCELAGRN*
CSTR_1022636CSTR_10226361F029455ARGSMADRVIDLDLWGEGAERLPAITITGQGLRIEGSQAEFDRLILIIGGWMK*
CSTR_1024451CSTR_10244512F073245MIAEPITLLDLALGLTLLIALVAIVVNVIALVKEYIKSQNVRA*
CSTR_1025975CSTR_10259753F045118FSLFSLLKARRAQQRGYGTTFLVANSSQEFCVYDKLQEMREHGLETSELPETMRFEHRALKKEKVRTLYGFTRVNELFHGGYEVVKEKQVESWKNSLFSFSAEEVVVLGSKQLEQEMKAFQEKFGSNWFQYFLRSYGAYSLAKFAGKEVVRSALENLNSERTKVWRTMKLLEEAERELLVLKQEEGSSKTLGELYEELRGKVCELAGRN*
CSTR_1026402CSTR_10264021F021489MTIEKKIESVQEYNLLKLLKANSSLKRFGVEWIKLDHTLCRAFATNEFAMIVADLEPNQWHDIFDGLPEVIFIDKLKRDEVHYFEAKELVYYNYLSVFEAVGKEPNYQPVMHFDLELLRNLTDKFDNIYFVKQSGKALFMKLEGDKYPAGSYYGALMPKTISQEETAKIIEALSSLATDGEIRRQWVADLREFAQE*
CSTR_1028711CSTR_10287116F104682MREIGIDRPRFDVKVSTEIFTLYFIPNLARKKYIDFWHRVEQMIEALKIADAKERKQAVDSLSTDDESDLLKEIIEVTLEANGIAYNETWWEEHTDAEMQLEFVRSVIEGSDNGKKKVLQVLKA*
CSTR_1028770CSTR_10287702F047964MVSKKEMLVILNKVAAVFGKEIDEKLVSVYHLALKQYSRMALADAAMLCVQENSFMPRPKDLVEKIDKYDLERKWQVVEPSTERTYWVLFREEYETTDDINEIECKEIFADEYVGAPKLKKTSETNNMSDEERLIQFRKLY
CSTR_1030708CSTR_10307081F049316MDKDKRITTIVLDKEADRKSKIIAEFTGKSLSAIYREALDMYFSHFVNNDLLSEVNEYLDKLYWQYKIDNPHIFAAVQFGNLSNAAVMIAEAIKQLPQEPEAQKLIDEGMRLISVLSK*
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