Sample 3300002597

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

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Sample 3300002597

3300002597: Camel rumen microbial communities from Jandagh-Isfahan, Iran - Sample 1

Overview

Basic Information
IMG/M Taxon OID	3300002597 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0111350 \| Gp0092447 \| Ga0041811
Sample Name	Camel rumen microbial communities from Jandagh-Isfahan, Iran - Sample 1
Sequencing Status	Permanent Draft
Sequencing Center	Beijing Genomics Institute (BGI)
Published?	Y
Use Policy	Open

Dataset Contents
Total Genome Size	815662394
Sequencing Scaffolds	17
Novel Protein Genes	19
Associated Families	18

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	12
All Organisms → cellular organisms → Bacteria	1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales	1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Rikenellaceae → unclassified Rikenellaceae → Rikenellaceae bacterium	1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Prevotellaceae → Prevotella	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Camel Rumen Microbial Communities From Jandagh-Isfahan, Iran
Type	Host-Associated
Taxonomy	Host-Associated → Mammals → Digestive System → Foregut → Rumen → Camel Rumen → Camel Rumen Microbial Communities From Jandagh-Isfahan, Iran

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	Unclassified
Earth Microbiome Project Ontology (EMPO)	Host-associated → Animal → Animal proximal gut

Location Information
Location	Jandaq, Isfahan Province, Iran
Coordinates	Lat. (^o)	34.041281	Long. (^o)	54.414582	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F015685	Metagenome / Metatranscriptome	252	Y
F023770	Metagenome / Metatranscriptome	208	Y
F046116	Metagenome	151	Y
F048027	Metagenome / Metatranscriptome	148	Y
F051611	Metagenome	143	Y
F059440	Metagenome / Metatranscriptome	134	Y
F062887	Metagenome / Metatranscriptome	130	Y
F066905	Metagenome	126	Y
F067315	Metagenome / Metatranscriptome	125	Y
F082826	Metagenome / Metatranscriptome	113	Y
F082888	Metagenome	113	Y
F090962	Metagenome / Metatranscriptome	108	Y
F096242	Metagenome	105	Y
F097585	Metagenome / Metatranscriptome	104	Y
F098367	Metagenome / Metatranscriptome	103	Y
F098417	Metagenome / Metatranscriptome	103	Y
F102240	Metagenome	101	Y
F106163	Metagenome	100	Y

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
DRAFT_10001120	Not Available	11953	Open in IMG/M
DRAFT_10008321	Not Available	500	Open in IMG/M
DRAFT_10045051	All Organisms → cellular organisms → Bacteria	36401	Open in IMG/M
DRAFT_10079890	Not Available	1832	Open in IMG/M
DRAFT_10097170	Not Available	3152	Open in IMG/M
DRAFT_10129881	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales	1475	Open in IMG/M
DRAFT_10202643	Not Available	611	Open in IMG/M
DRAFT_10207407	Not Available	1156	Open in IMG/M
DRAFT_10216885	Not Available	1749	Open in IMG/M
DRAFT_10249161	Not Available	2067	Open in IMG/M
DRAFT_10384768	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Rikenellaceae → unclassified Rikenellaceae → Rikenellaceae bacterium	1939	Open in IMG/M
DRAFT_10597278	Not Available	617	Open in IMG/M
DRAFT_10675878	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Prevotellaceae → Prevotella	1267	Open in IMG/M
DRAFT_10693478	Not Available	1063	Open in IMG/M
DRAFT_11044876	Not Available	1095	Open in IMG/M
DRAFT_11076140	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	916	Open in IMG/M
DRAFT_11173873	Not Available	889	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
DRAFT_10001120	DRAFT_1000112029	F067315	MNFDKNLEILSNLLQIKSYEILVEDFNNTDLMKYLKHQDALLDKIIEQNDQIISLLKGEKK*
DRAFT_10008321	DRAFT_100083211	F098417	STHKLPIYFPKLHFMHTSKNQKSSFLTIVAFVMVLFVGYIFSCLSDTTFAKSNDENISPFAENIHIKDLQKEDQEKTFAGVEKSVAQRAVSWNKLVGNNDSTSSLVVNLPENGDNTTLDKVASYEDTSTTNVANNMQLSFANSYILPSVYQDISTSSY
DRAFT_10045051	DRAFT_1004505147	F062887	MPVKRTKGGGYRYGTKGKTYYGKGAKAKAEKQGRAIKANQARRKK*
DRAFT_10079890	DRAFT_100798901	F096242	MLLKLIKTRQYISGSHCEVWEINHETGNRLLGEVFVLNEHLPLELIYRVTVSVRGICIQGRHCGWQWECERREQAVTEYLKVVQECREEIRIEVCEPTPDLPGYPEVDYHPGDFGEEFTPIIVPLNEDFDE*
DRAFT_10097170	DRAFT_100971706	F051611	MVKDKVTKTDLEKFNVNDQKVFTLPSWNKARSAQSYANQMKKMTIGTSRPMEFKAIIGDPNKVTGECGVTITRIK*
DRAFT_10129881	DRAFT_101298813	F106163	MKKWLLLLPLVLLTLSACREKRYFTEVPGDVYLAQIVFEDNSFRDFTVVSDVLYAGEDTTSHYKMVFYMPEGWDDSYPIFLDRYVPLEFGQAWTAYQGRPAAEAALSRGDMIVVLVAYEEQTAISDILLAEYFLKEHDADLPGDSKQLLTPAYFDFE*
DRAFT_10202643	DRAFT_102026431	F048027	MSKKNNETKKSLDTRVRAIGESGRGVGMPNWFNLPYNKEKRALHIDICKKLTAMSVANGNYPITYLVYFAVGKNAHRLPTFLAGYTKFDEKKAETIFKWLTLFAKHNKNEKLFRNPNLAHALCRFYDKYSTKTKDFKAALATYEPNPKVANFTMVAEGLGIAKKPKEEAEVEA
DRAFT_10207407	DRAFT_102074071	F090962	MQFIDILNKIWTTYTDWISFFFHSNGVWTIVWSILVLVWVVSFLIFLPLHRLSLKKVEKAKKNLVDSVDRLIYLLSKAQYKLTEQQTLKYDPCFALMKTMFSHFEYIDNLDTIRENVKKVELLLKQRVISDAEWSTIDSQKKSLKFHTFWSKFFGYDLNIVTLIYNLFW*
DRAFT_10216885	DRAFT_102168852	F066905	MPDEGRNCGCGCGNNGILGGLFGGNGCNSEILFFIIVFLLLFTNCGCGRN*
DRAFT_10249161	DRAFT_102491616	F097585	MSEIHYIEENLPHKTSEVVCLGCLKRWIAVRPMATLLKDLECPQCGKQGYVIETGEIIDTEDYA*
DRAFT_10384768	DRAFT_103847683	F106163	MKRGLFILLALFLLAGCEEKQYFMNVSRGETWLSQICFDDGSEKGFTVVSDVLYAGRDTSSRYKMVFYLPDGWDDTYPIFMDRNAAPAPATWTAYQGSPVAEKALKEGNMIVVLVAYEEKTAIPDILLAEYFLRENDADLPGDSKNILTAAYFEFE*
DRAFT_10597278	DRAFT_105972781	F102240	TEQDSDAGVLAEYLVGDILGCLPPTRKENSPFDLTTKSGATIEVKATTHRCLRKGRTPYYRWKVTTQSEALKGNRPIADVWLFLIANFPKARSGTPRVLQAFDLRNWTCSLVSGEQLRTAGCTSYVSESTLRRLGVDSFPLGELKKMFPS*
DRAFT_10675878	DRAFT_106758782	F059440	MEQKSRKEREAEFKAKIAKLDAYVEEMNAKGNLTDEEWKEVWSAMLQTNKYLRAIGAPESEMYDI*
DRAFT_10693478	DRAFT_106934781	F082826	MARKYTIQLNYNASIIVEVTGNDEGEALENARNYAEDADIREFTIGNERESQILRQG*
DRAFT_11044876	DRAFT_110448762	F046116	MVVSWGLIAGLSLEEIHRMKPGAVLDLFIYRRRYDDVMHWITREE*
DRAFT_11076140	DRAFT_110761402	F082888	MAQIIEINVDNKNYEIEWAISEHFNELKGMKFNLNEVAADQIITINNLSEVAKILLSAVAGAVIQHLIDINVPIDKIFSGYFIVK*
DRAFT_11173873	DRAFT_111738731	F015685	MAKITLHGMFARVKGKFNKSETLYFKGCPCGKEQLGVDLLNPSKAKESKNVQCQAALKTAAQAAKTALADPTERVTLEAGFKAQSKYTSLFAYTVAQKYVKPNFD*
DRAFT_11173873	DRAFT_111738732	F023770	MARVEFDIGIDSVRGILMGTDPFYIRRYPERGGGVMHIVQARPNRSSHVPSPAEAANRVSFGAQFGTQRHIDFLERKWKGQLELPFCE*
DRAFT_11412601	DRAFT_114126012	F098367	MEPIKRMKNYNTRLKTVLNELEVLEDYVDTDYSEIVTDLGYITVMLEQRRERLQRRGRTQ

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