Sample 3300003523

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

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Sample 3300003523

3300003523: Camel rumen microbial communities from Jandagh-Isfahan, Iran - Sample 1

Overview

Basic Information
IMG/M Taxon OID	3300003523 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0111350 \| Gp0092447 \| Ga0060308
Sample Name	Camel rumen microbial communities from Jandagh-Isfahan, Iran - Sample 1
Sequencing Status	Permanent Draft
Sequencing Center	Beijing Genomics Institute (BGI)
Published?	Y
Use Policy	Open

Dataset Contents
Total Genome Size	1259982046
Sequencing Scaffolds	21
Novel Protein Genes	22
Associated Families	16

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales	4
All Organisms → Viruses	1
Not Available	8
All Organisms → Viruses → Predicted Viral	1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Rikenellaceae → unclassified Rikenellaceae → Rikenellaceae bacterium	1
All Organisms → cellular organisms → Bacteria	4
All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanosphaera → unclassified Methanosphaera → Methanosphaera sp.	1
All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Camel Rumen Microbial Communities From Jandagh-Isfahan, Iran
Type	Host-Associated
Taxonomy	Host-Associated → Mammals → Digestive System → Foregut → Rumen → Camel Rumen → Camel Rumen Microbial Communities From Jandagh-Isfahan, Iran

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	Unclassified
Earth Microbiome Project Ontology (EMPO)	Host-associated → Animal → Animal proximal gut

Location Information
Location	Jandaq, Isfahan Province, Iran
Coordinates	Lat. (^o)	34.041281	Long. (^o)	54.414582	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F012184	Metagenome / Metatranscriptome	282	Y
F027710	Metagenome / Metatranscriptome	193	Y
F041506	Metagenome / Metatranscriptome	160	Y
F048027	Metagenome / Metatranscriptome	148	Y
F053097	Metagenome / Metatranscriptome	141	Y
F072949	Metagenome / Metatranscriptome	120	Y
F075523	Metagenome / Metatranscriptome	118	Y
F076635	Metagenome / Metatranscriptome	118	Y
F081939	Metagenome / Metatranscriptome	114	N
F082826	Metagenome / Metatranscriptome	113	Y
F090962	Metagenome / Metatranscriptome	108	Y
F098178	Metagenome	104	Y
F098322	Metagenome / Metatranscriptome	104	Y
F098367	Metagenome / Metatranscriptome	103	Y
F102240	Metagenome	101	Y
F106163	Metagenome	100	Y

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
DRAFT_10010083	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales	7316	Open in IMG/M
DRAFT_10029024	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales	4051	Open in IMG/M
DRAFT_10050247	All Organisms → Viruses	2914	Open in IMG/M
DRAFT_10051486	Not Available	2872	Open in IMG/M
DRAFT_10052041	All Organisms → Viruses → Predicted Viral	2854	Open in IMG/M
DRAFT_10079172	Not Available	2215	Open in IMG/M
DRAFT_10080352	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Rikenellaceae → unclassified Rikenellaceae → Rikenellaceae bacterium	2195	Open in IMG/M
DRAFT_10086048	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales	2104	Open in IMG/M
DRAFT_10138440	All Organisms → cellular organisms → Bacteria	1566	Open in IMG/M
DRAFT_10162902	All Organisms → cellular organisms → Bacteria	1415	Open in IMG/M
DRAFT_10272310	Not Available	1016	Open in IMG/M
DRAFT_10286710	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanosphaera → unclassified Methanosphaera → Methanosphaera sp.	981	Open in IMG/M
DRAFT_10308945	Not Available	933	Open in IMG/M
DRAFT_10352278	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales	856	Open in IMG/M
DRAFT_10368165	Not Available	831	Open in IMG/M
DRAFT_10415418	Not Available	768	Open in IMG/M
DRAFT_10476098	All Organisms → cellular organisms → Bacteria	701	Open in IMG/M
DRAFT_10564455	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	625	Open in IMG/M
DRAFT_10597716	Not Available	599	Open in IMG/M
DRAFT_10621819	Not Available	583	Open in IMG/M
DRAFT_10701181	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
DRAFT_10010083	DRAFT_100100838	F106163	MNNMKKWLLLLPLVLLTLSACREKRYFTEVPGDVYLAQIVFEDNSFRDFTVVSDVLYAGEDTTSHYKMVFYMPEGWDDSYPIFLDRYVPLEFGQAWTAYQGRPAAEAALSRGDMIVVLVAYEEQTAISDILLAEYFLKEHDADLPGDSKQLLTPAYFDFE*
DRAFT_10029024	DRAFT_100290242	F106163	MMIKRTRLLLLLPLVLLLLSGCREKRYFTEVPGRDMYLARLVFEDESFRDFTVVSDVLYAGEDSSSRYKMVFYMPDGFDDSYPIFLDRYVPCSGQAWHAYQGQPAAEAALNRGDMIVVLLAYDEQTAIPDILLAEHFLKEHDADFPGDSKKILTTAWFDFE*
DRAFT_10050247	DRAFT_100502471	F053097	MSIPPFREHFNNAEDKSMALKEMEYVIWLHKWNTPYAAYPADQRPRIVAKDVFKDENYVPSEEVNELARRFNEF*
DRAFT_10051486	DRAFT_100514863	F072949	MSKRKVQVKKMVVDKNAAQFMRTAANLARKGKTNKKLHGRNANPKAIKYAI*
DRAFT_10052041	DRAFT_100520412	F012184	MNVNEILNAILSLSPDASMARQNKTNFIVVPCDDGVAKVSVGVALAKDTKTCKAFNLEAAKAEYKAWEAEKALREAEKASKPVKAKGVNPEAQARRDALDKAIAEMPAFADYTATDILNALAGVVPENTLVMAIGSSAKRLVENGTLVVREDEKGKKYYTKH*
DRAFT_10079172	DRAFT_100791721	F090962	LIFLPLHRLNLKRVLKSKKDLVNSVDRVIYLLSKAQYSLSEQQTLKYDPCFALMKTMFGSGHFEYIDNLDTIKENVKKVEILLKQRVISDEEWNRIDKQRNRLRYHLFRRKFFGYELNTVTC*
DRAFT_10080352	DRAFT_100803523	F106163	MKRGLFILLALFLLAGCEEKQYFMNVSRGETWLSLICFDDGSEKGFTVVSDVLYAGSDTSSRYKMVFYLPDGWDDTYPIFMDRNAAPAPATWTAYQGSPVAEKALKEGNMIVVLVAYEEKTAIPDILLAEYFLRENDADLPGDSKNILTAAYFEFE*
DRAFT_10086048	DRAFT_100860483	F075523	MTKQEINDQLELLRLKELFMSDIKIRSKMAHLLSEECAAEIPPYKEFCEFAHCTPEVATMLTKVTLYDVILTPEEIAAERERLERIKQ*
DRAFT_10138440	DRAFT_101384403	F076635	MMIKRGSRVRVIKINTAGGMDWQAKRLEGKIFTVRFIDSAGQIHLDGTGIALIPGVDQFEVVK*
DRAFT_10162902	DRAFT_101629022	F041506	MGKTYTLEDNDGLMSELKSMRGKMSEMRRRLEHDEITPDEWRHWYAGYQARLDELRKAVSGMREEVSRRNADLDLQMRERAAELNIPFEEYKEYIKSLIIK*
DRAFT_10272310	DRAFT_102723102	F048027	MSKKNNETKKSLDTRVRAIGESGRGVGMPNWFNLPYNKEKRALHIDICKKLTAMSVANGNYPITYLVYFAVGKNAHRLPTFLAGYTKFDEKKAETIFKWLTLFAKHNKNEKLFRNPNLAHALCRFYDKYSTKTKDFKAALATYEPNPKVANFTMVAEGLGIAKKPKEEAEVEAAEAAMEPAVVTA*
DRAFT_10286710	DRAFT_102867102	F082826	MNYNASIVVEVIAKDEGEALDKARDKAEDADIRQFTLGSENESKILRTE*
DRAFT_10308945	DRAFT_103089451	F102240	MTHVTAIGKTLRVLSFYRWAFGDLTEQDSDAGVLAEYLVGDILGCLPPTRKENSPFDLTTKSGATIEVKATTHRCAKKGRTPYYRWKVTTQSEALKGNRPIADVWLFLIANFPKARSGTPRVLQAFDLRNWTCSLVSGEQLRTAGCTSYVSESTLRRLGVDSFPLGELKKMFPS*
DRAFT_10352278	DRAFT_103522781	F081939	WFQQVAEIFMVKKKEKALTKREKVGMLADKLNEAINSCKLEPTEELDIFAESVALLIAYWGKISDWSPIEKASYVGYVTTTVLEKGLDAEIKSFEEHRKSMKPQIGN*
DRAFT_10368165	DRAFT_103681651	F090962	LVWVISFLIFLPLHRLSLKKEKQAKQDLVNSVDRLIYLLSKAQYSLSEQQALKFDPCFALMKTMFGSGHFEYIDNIDVIKENVKKVETLLKQRVISDEEWSKIDSQKNSLKFHTFWKKFLGYELNTVTLCIYNLFW*
DRAFT_10415418	DRAFT_104154181	F076635	MIKRGSKVSVVKMDTAGGMDWQAKRLEGKVFTVRFIDSAGQIHLEETGIALLPVSMNMRL
DRAFT_10476098	DRAFT_104760982	F098322	MDFQRMDKKASAGRFERGYLKVTTENLTSWALSEREKPPKTNF*
DRAFT_10562436	DRAFT_105624361	F098367	MKNYNTRLKTVLNELEVLEDYVDTDYSEIVTDLGYITVMLEQRRERLQRRGRTQ*
DRAFT_10564455	DRAFT_105644552	F027710	MKKDKLYVLVDKGLRPVYGCVQGGHAVAQWLLEHPCQTWDNQYLIYLSADVRKWKNRLNALDIDYSEFKEPDLDNKITALAVHGHDNVFKSLRTVTED*
DRAFT_10597716	DRAFT_105977161	F081939	VETLSVIQQLMSAQVLAMFIARISQEWCQLDVGIYIMGKKIKTKNEKIGMLADKLNEAIGSCKLEPTEELEVFAEAVALLIAYWGKVSDWTPIEKASYFGYVMTTVAEKGLDLEVKSFDEFKKTMFNKGN*
DRAFT_10621819	DRAFT_106218191	F098178	MKKYFILKLDSYEGEGSSLTVDADGSDCMYVVLNVEGSSAEIVDWGYPTVEDLLAAWDNVTFENVDEFR*
DRAFT_10701181	DRAFT_107011811	F041506	MSKIYTLEDGESLMAELKSTRGKMAEMRGRLERDEITPDEWRQWYAGYQARLDEIREAVSGMREEASRRNADLNLQMSERAVELNMTIDEYKEYLKSLIIK*

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