Sample 3300003623

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

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Sample 3300003623

3300003623: Hypersaline viral communities from Bras del Port, Santa Pola, Spain - CR30 Febrero14 septiembre precorrection

Overview

Basic Information
IMG/M Taxon OID	3300003623 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0069917 \| Gp0107658 \| Ga0061040
Sample Name	Hypersaline viral communities from Bras del Port, Santa Pola, Spain - CR30 Febrero14 septiembre precorrection
Sequencing Status	Permanent Draft
Sequencing Center	Lifesequencing S.L.
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	940834
Sequencing Scaffolds	1
Novel Protein Genes	2
Associated Families	2

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Hypersaline Viral And Bacterial Communities From Bras Del Port, Santa Pola, Spain
Type	Environmental
Taxonomy	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Microbial Mats → Hypersaline Samples → Hypersaline Viral And Bacterial Communities From Bras Del Port, Santa Pola, Spain

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	aquatic biome → saline evaporation pond → hypersaline water
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Hypersaline (saline)

Location Information
Location	Bras del Port, Santa Pola, Alicante, Spain
Coordinates	Lat. (^o)	38.192206	Long. (^o)	-0.591865	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F062297	Metagenome	131	N
F076468	Metagenome	118	N

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
CR30sep_10285	Not Available	629	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
CR30sep_10285	CR30sep_102851	F062297	CPRRYTVLAERTEDGRVVEQSVTGQSRAEELFERWDEGEQLCNLRVKAISAPMDDVTRHFEHDWPPTNNSPVSSADDGSTETATKRWETR*
CR30sep_10449	CR30sep_104491	F076468	MTNLEEIDTKAVWLSGRYWRRESKVVHIDGDCDQLDSCDNPRGPVDPDVLQPDMAVCKRCDPTEPDQYGGSGTSLAHRLRHGDLQDATLDSDSVGGDE*

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