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Sample 3300003672
3300003672: Estuarine microbial mat communities from Elkhorn Slough, Moss Landing, CA, USA - CR2A Metatranscriptome (Metagenome Metatranscriptome)
Overview
Basic Information
IMG/M Taxon OID 3300003672 Open in IMG/M
GOLD Reference (Study | Sequencing Project | Analysis Project) Gs0053052 | Gp0053805 | Ga0001194
Sample Name Estuarine microbial mat communities from Elkhorn Slough, Moss Landing, CA, USA - CR2A Metatranscriptome (Metagenome Metatranscriptome)
Sequencing Status Permanent Draft
Sequencing Center DOE Joint Genome Institute (JGI)
Published? Y
Use Policy Open
Dataset Contents
Total Genome Size 4726411
Sequencing Scaffolds 17
Novel Protein Genes 18
Associated Families 15
Dataset Phylogeny
Taxonomy Groups Number of Scaffolds
Not Available 14
All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Lacunisphaera → Lacunisphaera limnophila 2
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. 351MFTsu5.1 1
Ecosystem and Geography
Ecosystem Assignment (GOLD)
Name Estuarine Microbial Mat Communities From Elkhorn Slough, Moss Landing, Ca, That Are H2-evolving And Photosynthetic
Type Environmental
Taxonomy Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine → Estuarine Microbial Mat Communities From Elkhorn Slough, Moss Landing, Ca, That Are H2-evolving And Photosynthetic
Location Information
Location Elkhorn Slough, Moss Landing, CA
Coordinates Lat. (o ) 33.8 Long. (o ) -121.8 Alt. (m) N/A Depth (m) N/A
Location on Map
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Associated Families
Associated Scaffolds
Sequences