Sample 3300004077

Overview

Basic Information
IMG/M Taxon OID	3300004077 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0111376 \| Gp0101408 \| Ga0055523
Sample Name	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - White_ThreeSqC_D2
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	874863250
Sequencing Scaffolds	48
Novel Protein Genes	49
Associated Families	46

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	2
All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	1
All Organisms → Viruses → Predicted Viral	1
All Organisms → cellular organisms → Bacteria	8
All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2
Not Available	15
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	1
All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium	3
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfosarcina → Desulfosarcina variabilis	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Olavius algarvensis Delta 1 endosymbiont	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1
All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Peregrinibacteria → Candidatus Peribacteria → Candidatus Peribacterales → Candidatus Peribacteraceae → unclassified Candidatus Peribacteraceae → Candidatus Peribacteraceae bacterium	2
All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Natrialbales → Natrialbaceae → Halopiger → Halopiger goleimassiliensis	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium	1
All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Natural And Restored Wetland Microbial Communities From The San Francisco Bay, California, Usa, That Impact Long-Term Carbon Sequestration
Type	Environmental
Taxonomy	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands → Natural And Restored Wetland Microbial Communities From The San Francisco Bay, California, Usa, That Impact Long-Term Carbon Sequestration

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	Unclassified
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline)

Location Information
Location	USA: San Francisco Bay, California
Coordinates	Lat. (^o)	38.131752	Long. (^o)	-122.266335	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Family	Category	Number of Sequences	3D Structure?
F003297	Metagenome / Metatranscriptome	495	Y
F004052	Metagenome / Metatranscriptome	455	Y
F004829	Metagenome	422	Y
F005564	Metagenome / Metatranscriptome	396	Y
F006859	Metagenome / Metatranscriptome	363	Y
F008634	Metagenome / Metatranscriptome	330	Y
F016664	Metagenome / Metatranscriptome	245	Y
F018371	Metagenome / Metatranscriptome	235	Y
F024115	Metagenome / Metatranscriptome	207	Y
F024904	Metagenome	204	Y
F025254	Metagenome / Metatranscriptome	202	Y
F029006	Metagenome	189	Y
F029294	Metagenome	189	Y
F035989	Metagenome	171	Y
F038919	Metagenome / Metatranscriptome	165	Y
F040630	Metagenome	161	Y
F042087	Metagenome / Metatranscriptome	159	Y
F042645	Metagenome / Metatranscriptome	158	Y
F044429	Metagenome	154	N
F048676	Metagenome / Metatranscriptome	148	Y
F051261	Metagenome / Metatranscriptome	144	Y
F057714	Metagenome / Metatranscriptome	136	Y
F057781	Metagenome / Metatranscriptome	136	Y
F058852	Metagenome	134	Y
F060099	Metagenome	133	Y
F062546	Metagenome / Metatranscriptome	130	Y
F062568	Metagenome / Metatranscriptome	130	Y
F064234	Metagenome / Metatranscriptome	129	Y
F064597	Metagenome / Metatranscriptome	128	Y
F070131	Metagenome / Metatranscriptome	123	Y
F072360	Metagenome / Metatranscriptome	121	Y
F072365	Metagenome	121	Y
F073570	Metagenome	120	Y
F074893	Metagenome / Metatranscriptome	119	Y
F075833	Metagenome / Metatranscriptome	118	Y
F077315	Metagenome / Metatranscriptome	117	Y
F078289	Metagenome / Metatranscriptome	116	N
F087912	Metagenome	110	Y
F088437	Metagenome	109	Y
F090795	Metagenome	108	Y
F093890	Metagenome / Metatranscriptome	106	Y
F093897	Metagenome	106	Y
F099323	Metagenome / Metatranscriptome	103	N
F100641	Metagenome	102	Y
F104597	Metagenome / Metatranscriptome	100	Y
F105216	Metagenome / Metatranscriptome	100	Y

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
Ga0055523_10004531	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2058	Open in IMG/M
Ga0055523_10006006	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	1857	Open in IMG/M
Ga0055523_10008770	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	1611	Open in IMG/M
Ga0055523_10012569	All Organisms → Viruses → Predicted Viral	1417	Open in IMG/M
Ga0055523_10018658	All Organisms → cellular organisms → Bacteria	1232	Open in IMG/M
Ga0055523_10021084	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1179	Open in IMG/M
Ga0055523_10021151	Not Available	1178	Open in IMG/M
Ga0055523_10022849	Not Available	1146	Open in IMG/M
Ga0055523_10037519	All Organisms → cellular organisms → Bacteria	961	Open in IMG/M
Ga0055523_10042709	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	918	Open in IMG/M
Ga0055523_10050744	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	863	Open in IMG/M
Ga0055523_10050817	Not Available	862	Open in IMG/M
Ga0055523_10061222	All Organisms → cellular organisms → Bacteria	807	Open in IMG/M
Ga0055523_10066587	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium	782	Open in IMG/M
Ga0055523_10069318	Not Available	771	Open in IMG/M
Ga0055523_10069942	All Organisms → cellular organisms → Bacteria	768	Open in IMG/M
Ga0055523_10075471	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	748	Open in IMG/M
Ga0055523_10078665	Not Available	737	Open in IMG/M
Ga0055523_10080126	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfosarcina → Desulfosarcina variabilis	732	Open in IMG/M
Ga0055523_10086082	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium	713	Open in IMG/M
Ga0055523_10086855	All Organisms → cellular organisms → Bacteria	711	Open in IMG/M
Ga0055523_10088443	Not Available	706	Open in IMG/M
Ga0055523_10094787	All Organisms → cellular organisms → Bacteria	688	Open in IMG/M
Ga0055523_10095794	Not Available	686	Open in IMG/M
Ga0055523_10100038	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	675	Open in IMG/M
Ga0055523_10101726	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Olavius algarvensis Delta 1 endosymbiont	671	Open in IMG/M
Ga0055523_10107995	Not Available	656	Open in IMG/M
Ga0055523_10110377	Not Available	651	Open in IMG/M
Ga0055523_10111689	Not Available	648	Open in IMG/M
Ga0055523_10119962	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	631	Open in IMG/M
Ga0055523_10120290	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Peregrinibacteria → Candidatus Peribacteria → Candidatus Peribacterales → Candidatus Peribacteraceae → unclassified Candidatus Peribacteraceae → Candidatus Peribacteraceae bacterium	630	Open in IMG/M
Ga0055523_10130840	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Peregrinibacteria → Candidatus Peribacteria → Candidatus Peribacterales → Candidatus Peribacteraceae → unclassified Candidatus Peribacteraceae → Candidatus Peribacteraceae bacterium	611	Open in IMG/M
Ga0055523_10134357	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	605	Open in IMG/M
Ga0055523_10134728	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Natrialbales → Natrialbaceae → Halopiger → Halopiger goleimassiliensis	605	Open in IMG/M
Ga0055523_10137167	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	601	Open in IMG/M
Ga0055523_10151705	Not Available	579	Open in IMG/M
Ga0055523_10155460	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	573	Open in IMG/M
Ga0055523_10157090	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium	571	Open in IMG/M
Ga0055523_10162192	Not Available	564	Open in IMG/M
Ga0055523_10162927	Not Available	563	Open in IMG/M
Ga0055523_10164661	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium	561	Open in IMG/M
Ga0055523_10178521	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
Ga0055523_10191025	Not Available	530	Open in IMG/M
Ga0055523_10191423	Not Available	530	Open in IMG/M
Ga0055523_10191925	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	529	Open in IMG/M
Ga0055523_10201552	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	519	Open in IMG/M
Ga0055523_10213696	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	507	Open in IMG/M
Ga0055523_10214615	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0055523_10004531	Ga0055523_100045314	F008634	MYGQGRELEIGNATSAMLISLLQALVDKDVLTNVEVRALLTKAASDLGPHEYTAPVKGAIGIILNDILPKFPETGGD*
Ga0055523_10006006	Ga0055523_100060061	F040630	GHCDLPFDLAQGGGESFDAAQDREPVERLVEPFVICVLLFEILIL*
Ga0055523_10008770	Ga0055523_100087705	F093897	VNKIMKPGFYISMGIAIAGLIVGFVLLNDIQQEKESKNIWIQKIPTQCNDVWEREHQEFYDLNPELLNSNKEKSKEILETIIKNHYEKAGISILDLNLELDVIDEIRCESCDCLGSDRVSIKIPKNQFELISQSEGWKPLE*
Ga0055523_10012569	Ga0055523_100125693	F029294	MTQETGETRDAIIEADNKMLQDILNANSSRTEKYWIVLFAKPSKRSVDGKPTLIKHMKAYPKRPSSQVGMLIGEVDNKKGSVEWEINMPQAPMDFNALGALGAKASRDVVTETTTIPQAYITK*
Ga0055523_10018658	Ga0055523_100186582	F072360	MNRNLKILNVFSRKALFIAFILLTGFSFSAVGASAKGCPGGFGCLNCEAAAHPHMPGMDAEMVNHGCQSAEQNRSCGFEAGSRSDQFDKMATVAESGTHPYPGIFSAATDESDQAHLLKGFVAQFQYPDRGQLTPIYLLTLSLLC*
Ga0055523_10021084	Ga0055523_100210841	F006859	AELDAYKSLDGRVTFRPLADKNVSVSGFYQYGWYARDRPRNVAIVMGSYEHPNGFVTAQYLSATDNPFVAVDIQRKGLSFFGEVRQGPTGWAVVGGLDFVDPDGDAENDAERRLIFGGAHWADVGAGRLGFVVTLEQNYRTASSQLLQRRLLAQTHVEF*
Ga0055523_10021151	Ga0055523_100211512	F018371	MQEMEVYVNGPEGANRLFMHSGMAEVEIRGGLPHPRWTLEVVCFELGRTYDLSEESIIKINASAALAGGRMDGVASFAGWQVFGAAGELDNESRRVRMNIAAGARDTQAFLEQISFQINILARVKE*
Ga0055523_10022849	Ga0055523_100228491	F005564	MNKIFIALMVIFFLGDPNMETLTWLGDIRNYVVAAAVALCSMPFIVFQLDG*
Ga0055523_10037519	Ga0055523_100375191	F064597	MPEPRQPKTAAEALLARLEDLLVHARFSDVLEAVAEATAEGVGGEALAVPLLLARCRALLGLGRWREVSEATERKLEELYALRPEEKRSILECHIAAGRSAWRLGRPSRAEEHFRAAYHISRWDFEDIGGMLRTRNLLGLCFLGAGDLHRAAAEFERGRREAADADFHHEEAAFALNGSIAALKL
Ga0055523_10042709	Ga0055523_100427092	F040630	LFGILNFGRCNLPFDLAQGGVESFDLAQDREPVERLVEPFGICVLLFEIFITAT*
Ga0055523_10050744	Ga0055523_100507441	F088437	NLALGVEPPQTIIEDEKHATECGQKSYIPLVYAPKEALIWWVDYLHGVSEAELTASLERFKAISDRLADITGATVDGWEAAQNALRATFEGITLVECHFHALLKLGQHLATYKRQREQAGQPLSEVEETNIRAAFWRVLKATTPDQYQQALDQLPEAFDQAPLASRKQSLVEKQALFQAWTSDDRLVAVTTALDQCLKFLNRKLDNMQTFHSHQSGLATVNAWAITRNCWRFLKGAKRAGLSPLELAGADFLGIPWLQLVNLLLSAWASLPFSAQALGLST*
Ga0055523_10050817	Ga0055523_100508173	F057714	MTQLQLFPPPAAPSAPLPGKVRAEAKSLLASLLIAVSQANSKQPQGKDSHE*
Ga0055523_10058546	Ga0055523_100585461	F099323	LATPTDVQLKNNQHPMNKILGFWRKFKAFLGHRLILELAIIGSFIAFTINPGSLGDIMRICGAFFLFNVLFGNYRIGDVTEGHLVVLGIFLIMLLINAFMPDEMIHRRSFRYFLALPGMMLAIHCLSKRTKPDSKNLVLYCSIAVLALTIQFVAYHTVERVVNSGGLESYGLSGNMHHFGSFAGLILPVLFYFSTQIKGWLRLLCVAGVIAAFYLLWESSSRIAWFAFFSSILIAILLFLRNRKLLLGLAGFFTISFIAALVSGLTAIKIRIV
Ga0055523_10061222	Ga0055523_100612221	F038919	VPIRWKIQDVGAPQFQLQVDGLDTLLERTRRAGYQFPSIGGTPIQRPFGRFVFAIDPDGVLVEFVEPSRLQ*
Ga0055523_10066587	Ga0055523_100665871	F025254	MEESVREMVFLIVEQLKAYVDGDEDALLELTQVLDSGRHDADVVNQAFELIFRALEPYAREDFSEDPTTPRRSVRVPTGSERALLDAPGYQYLYGLIEQGRISPEQFEEIMSRVREDTSFLDTEASARELATTVLIRWFDDEHGVEFDPSNPAWVH*
Ga0055523_10069318	Ga0055523_100693181	F093890	NKGGNLVRPRLLAFLLLLIFLLVTGLSSTFALASPTFLNRQAHPIHLGLTNIGQFHQNDLKTFEVWTQWNNPSPEKIKVQLTFTFFDKDSSDSQLGEDGKDDILMTVIETVTIPEQVNNWGKYFQLTAIGQKLNKGFDHPAEGAGLELYLDAQITSVQHFPSE*
Ga0055523_10069942	Ga0055523_100699421	F004829	MKTNFLISARAILIVVMVIAAASSKLYAIDSNNRYFAYGVGQRSCEDYIKFREKRLETLEQHERYSKDELYEIVDKIIEHWIAGFITAHNLYVSDTYDVIGKTTMDAFKVKVETVCRSNNKQRFAEAVIAVVQELHPQRVKTEAGK*
Ga0055523_10075471	Ga0055523_100754711	F078289	PKMRELGVSQEVIQYFISNQTSSVSSEDVIKMKQSGLKNDDIMSAIKSDLYRPEQKSTSMKEAELIAKLKESGMSDEAVLQFIQTVKSTRRVDSDGNMTKQYTNESQRTQYPTEGATFPKPDNYGYDPLNGRFLLLVKPQNQ*
Ga0055523_10078665	Ga0055523_100786651	F004052	MRILTTIVQLTLATCLSSCDQQHSTSGIDPKLGIGCYDSHRATLPPGTQYEGIEKLSGNRLTIKIMNGVDVVTLDCGLNPDGTLQVNGN*
Ga0055523_10080126	Ga0055523_100801261	F048676	MLFRYSRLCGTSSDAVDAVKLKIPQGLKLLKFKMSGYLRNIVKLTISKI*
Ga0055523_10086082	Ga0055523_100860823	F024904	VECLRCGKLFGPNQIFHLKEDPRRPYLRCQHCGAKNEIRAEERFCIRLIGIIPEPAASRPGA*
Ga0055523_10086855	Ga0055523_100868551	F087912	MIRPEYKKILFDQRGAAVILWSFFAISSPIYLVIARQLLGNPKLGTNPTIAEPARLIFWILTLVDLGYYAYWRRKHLTPQGIRRDARQTKLFRALEEYNGVDEQNAAYLVSTYVTRKVVIFAIIEAIAVY
Ga0055523_10088443	Ga0055523_100884432	F105216	AACSDEAPKPWKAAEMRKLSEQFGHIAEAYAVVDICLPMIDADQDAKRSVIAKIEIRRYSQLSRINTEAEFANFLAYHRQTGGTDEQAAALDQIYRESYETAARHLTSVDNCAETVSDYANTILQTRVEPVP*
Ga0055523_10094787	Ga0055523_100947871	F090795	SGKVTRGSANIAWMPSEFSYVRLEYSHAKADAGVHPTDDRLTLQMSTRIGHHPAHAY*
Ga0055523_10095794	Ga0055523_100957941	F029006	MNKIIITLMAIYFVGDPHLQYLAWLGDLKLYVVAAALALVSMPW
Ga0055523_10100038	Ga0055523_101000381	F003297	VDDPVYYTRPWQARFVYELRDDVRIEDYVCGQEHRDISHIPGINEARAARGG*
Ga0055523_10101726	Ga0055523_101017262	F057781	MKQPDLRMLAHWLDPALVTTLETRRRLKKEWHRRRKLPTLQTLWL
Ga0055523_10107995	Ga0055523_101079951	F073570	MNEPINQIVGILNTTFHQMYQNRVPVGSLTDAQVDNKKTSHKYTIENDLIVYEKYDRHGKLISRVPWSPKPVAEKA*
Ga0055523_10110377	Ga0055523_101103772	F035989	MRGFGYRHAMTLEDIHHLHRVGRAALGSTDYFGSFTEVRWTHYRRGYDDKLFYILAAEI
Ga0055523_10111689	Ga0055523_101116891	F070131	MMGKMLTKIGIIGVFAFCFLLQVDLAGGDNRAYGQNKQKSNVPMEIELHFSSTPMLNEYTVLNVEIRALKDAPNTLIEIKIPSDGFELISGSTQHHEDLSSGSTTLYQLGVLPVALGQYKIAASAISGETDYIFGKREELYVNIGEEFSELSKSSFIPEIADNRSGATKIGNFSEPPTQVLPDQKPGEGQEDFYLAAP
Ga0055523_10119962	Ga0055523_101199622	F016664	MDQVVHEMPTLNEAKNTVEIVVHISEDLEDRQRNNLVAALDNENGIVSAEFCPLRYHLMLVRYDREQFSSQDVLRAVGAQKLQARLIGP
Ga0055523_10120290	Ga0055523_101202901	F062568	MASFGCDTPETISDIASKDEQRLVGTIAKALAANSPYLNVIKGGTFPAGVSDEIRSSVQMQAAPGDSYAVPTFVCDTDLCGQIGHQDLTDTIEYVTRLESFRGRGPNVCVKKGYAAFKGSYTMAEDSLRK
Ga0055523_10130840	Ga0055523_101308401	F062568	MAYTCDDAPSISDLASKDTNRIVGSIARALAANAPYLNVIGGGTFPSGTSDTIRNIVQMQAAPGDSLAIPTFYCDTELCGQLGHQDLTDTVEFDCQLESFRGRGPNVCVKKGYSAFKGSYSMAEDAL
Ga0055523_10134357	Ga0055523_101343571	F024115	VQLTLPKILWFIAALAIAWGLNAWRRNAASHGLEAAQQGDRSAAERWVDRALREGECELHEAREYVQSPATRQYVRRADYVESFVEKLYAGGAAKIEVCDSDLVGFRLAHYLLVTLPEDPTKQERVIADAQSFVRRDAVVYRGVSSSEVEAIVRDSTLVGEHRVLLDLPAE
Ga0055523_10134728	Ga0055523_101347281	F072365	MGEQQKECRECGWRGSAAELDETSDASTGKTHVFCPACGGVAIEDLKHDKKDEASES*
Ga0055523_10137167	Ga0055523_101371671	F060099	MGLTDDQRDDAAKALRAAQEAIEYTVKGVKGLEEAATLRGRIDEIELYLKRAKMALKF
Ga0055523_10151705	Ga0055523_101517051	F048676	YSHLCGTASDAIDAVKLESPQGFKLLKFKITEYLKNIIIVTISKI*
Ga0055523_10155460	Ga0055523_101554601	F075833	MEHPYTWYNALPESLQNMFGDHTFFALVAGMILILFSIKARGALVKASDPVVPAAELGSRNIAELIVQLIVSQSDAII
Ga0055523_10157090	Ga0055523_101570902	F058852	GARVVEELLDAIDFWTVAPKGRSAATFDGDPVEAQLPTLRRYATLPEPRRQFKFVLQDRGDVDDAIRMLDALSYRGAVVIQPEHGAGDGRRIFDAWPWDRYPDARLIPQTHKQSGLR*
Ga0055523_10162192	Ga0055523_101621921	F044429	MSELPPIEDRMPGCEWVLVIKYGDPYTNTPLTTGFGPFKTKEDADEFRAQYYYDQIVIADIVPINAVLPQSATELDIDFVPEGKVVDISSKINPHKH*
Ga0055523_10162927	Ga0055523_101629271	F042087	MPAYDISLRCKDCRRDHLALLKLHLDEGPERKQSLAEFFHGPSVPPQVEAIREHNALCPKTGKKFSVENNSEIFLVPPGQL
Ga0055523_10164661	Ga0055523_101646612	F042645	MPRITDLDVMEIRQAFEDALSRAQRADKREKMRFRKIRDEVYLLLTWEKPTPTAILNRWEERLHDVFAVMPYGFQDELLRLLTDKMQHPLRMRTKPESH*
Ga0055523_10178521	Ga0055523_101785212	F051261	PGPARTPIVKFPDAAIERAKKKAEAWKALCAKYKPLVEAARTQAKVA*
Ga0055523_10191025	Ga0055523_101910251	F074893	MKGSSQLHAIAGNESLTIRINGPMDLLLTMPLREHCQDTGASYRRYIVDFQDVGIVRDSGLALLLMLKRWANRAGATLCVINGNRDLMRR
Ga0055523_10191423	Ga0055523_101914231	F077315	LAYYQLWTLLLLGLLVPAQAAEALNPDALPQAQATLERLEEQLATARTANAQELKTLRKEVATVRSTAQDCLQQAEPKIEILDSELAILQPAKPKDTQKKTAQETQPAEQAEAPVSPAIAGQLQELLSSKASLEGRIAICKLLLLKSNYLDSNVDDYLRTVQTRQLLARGPTLVSV
Ga0055523_10191925	Ga0055523_101919251	F100641	DETTRRLEKELRPTPESIAFHYQMAAQDDPRAKQANEKTFWDPSVVEEIRRSGFVEQIYKN*
Ga0055523_10201552	Ga0055523_102015521	F104597	QGDWTVTCEGKRYQLDPRHEALSLVRRKVIVRTLRNGRVELVYRGQRLKWRALPEGSVRKPMPVKKARAARKEQPEKMGKTPPQNHPWRRDGVGKGQRFWKGIKAQGRAARLTVRDSGRPSLRSGLPTSRTVSRRNQATKNKQPRGHSLLSYDGDISKEF*
Ga0055523_10213696	Ga0055523_102136961	F064234	MKPEPTRPRSLREIEMEVEAEGREWTRQRLQQRLQEEADRQGGVFPPQRSGRSASACAADGVANGRGGR*
Ga0055523_10214615	Ga0055523_102146151	F062546	MANPKLRFYFREPTIDTNIPITDGTVKIDDFEWEFVPTEEECDAWDC

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300004077: Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - White_ThreeSqC_D2

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences