NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Sample 3300006627

3300006627: Soil microbial communities from the Leymus chinensis steppe, China - after adding 28 g N m- 2, yr-1



Overview

Basic Information
IMG/M Taxon OID3300006627 Open in IMG/M
GOLD Reference
(Study | Sequencing Project | Analysis Project)
Gs0117801 | Gp0125026 | Ga0101571
Sample NameSoil microbial communities from the Leymus chinensis steppe, China - after adding 28 g N m- 2, yr-1
Sequencing StatusPermanent Draft
Sequencing CenterChengdu Institute of Biology, Chinese Academy of Sciences
Published?N
Use PolicyOpen

Dataset Contents
Total Genome Size338697082
Sequencing Scaffolds18
Novel Protein Genes18
Associated Families18

Dataset Phylogeny
Taxonomy GroupsNumber of Scaffolds
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium1
Not Available9
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera → unclassified Acidisphaera → Acidisphaera sp. S1032
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas1
All Organisms → cellular organisms → Bacteria2
All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Saccharibacteria → unclassified Saccharibacteria → Candidatus Saccharibacteria bacterium1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1
All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium 13_2_20CM_2_54_15_9cls1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
NameSoil Microbial Communities From The Leymus Chinensis Steppe, China - Nitrogen Deposition
TypeEnvironmental
TaxonomyEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil → Soil Microbial Communities From The Leymus Chinensis Steppe, China - Nitrogen Deposition

Alternative Ecosystem Assignments
Environment Ontology (ENVO)grassland biomelandfertilized soil
Earth Microbiome Project Ontology (EMPO)Free-living → Non-saline → Soil (non-saline)

Location Information
Locationthe Inner Mongolia Grassland Ecosystem Research Station (IMGERS), China
CoordinatesLat. (o)43.63Long. (o)116.7Alt. (m)N/ADepth (m).1
Location on Map
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Associated Families

Associated Scaffolds

Sequences


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