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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| IMG/M Taxon OID | 3300006978 Open in IMG/M |
| GOLD Reference (Study | Sequencing Project | Analysis Project) | Gs0117927 | Gp0125737 | Ga0102686 |
| Sample Name | Non-marine hypersaline water viral communities from Mallorca, Spain, 2024 - Pool_1_virus M8 |
| Sequencing Status | Permanent Draft |
| Sequencing Center | University of Alicante |
| Published? | N |
| Use Policy | Open |
| Dataset Contents | |
|---|---|
| Total Genome Size | 6763728 |
| Sequencing Scaffolds | 2 |
| Novel Protein Genes | 3 |
| Associated Families | 3 |
| Dataset Phylogeny | |
|---|---|
| Taxonomy Groups | Number of Scaffolds |
| All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Faviina → Merulinidae → Orbicella → Orbicella faveolata | 1 |
| Not Available | 1 |
| Ecosystem Assignment (GOLD) | |
|---|---|
| Name | Non-Marine Hypersaline Water Viral Communities From Mallorca, Spain, Pool 1-2-3 Virus M8 Mallorca 14 |
| Type | Host-Associated |
| Taxonomy | Host-Associated → Microbial → Bacteria → Unclassified → Unclassified → Hypersaline Water → Non-Marine Hypersaline Water Viral Communities From Mallorca, Spain, Pool 1-2-3 Virus M8 Mallorca 14 |
| Alternative Ecosystem Assignments | |
|---|---|
| Environment Ontology (ENVO) | Unclassified |
| Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Hypersaline (saline) |
| Location Information | ||||||||
|---|---|---|---|---|---|---|---|---|
| Location | Salinas de Campos (Mallorca) | |||||||
| Coordinates | Lat. (o) | 39.333 | Long. (o) | 3.05 | Alt. (m) | N/A | Depth (m) | N/A | Location on Map |
| Zoom: | Powered by OpenStreetMap © | |||||||
| Family | Category | Number of Sequences | 3D Structure? |
|---|---|---|---|
| F001105 | Metagenome / Metatranscriptome | 776 | Y |
| F003767 | Metagenome / Metatranscriptome | 469 | Y |
| F078292 | Metagenome / Metatranscriptome | 116 | Y |
| Scaffold | Taxonomy | Length | IMG/M Link |
|---|---|---|---|
| Ga0102686_100009 | All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Faviina → Merulinidae → Orbicella → Orbicella faveolata | 12096 | Open in IMG/M |
| Ga0102686_100145 | Not Available | 2006 | Open in IMG/M |
| Scaffold ID | Protein ID | Family | Sequence |
|---|---|---|---|
| Ga0102686_100009 | Ga0102686_10000913 | F001105 | MSDNKLVKTLMDAATITGLAAGIGWAAKKVVKENFTSDPSSSFMNYVKFTAVMAGSVALKQYLEDQKILPTN* |
| Ga0102686_100009 | Ga0102686_10000914 | F003767 | MASVAIMAGGAILNAAAFIGGNYLARALGGGDDAALKEKERHDKALEAYQAAYAKYSRDRTKLLDWIETNNEIKQQAKQNFTNTDYAFKLYNQAHPDKQMIPPKEPKFSDFYQPSEQQKQGELMFVGAGALALGYAAFRFL* |
| Ga0102686_100145 | Ga0102686_1001452 | F078292 | MLLAVLHRVMVHLGSLESTQEARVALGYRLGQLLRFFRALQTSRVLHNSMEHAKA* |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |