NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Sample 3300007084

3300007084: Non-marine hypersaline water viral communities from Salar Uyuni, Bolivia - ZN 5 Uyuni 2014



Overview

Basic Information
IMG/M Taxon OID3300007084 Open in IMG/M
GOLD Reference
(Study | Sequencing Project | Analysis Project)		Gs0116222 | Gp0120437 | Ga0080113
Sample NameNon-marine hypersaline water viral communities from Salar Uyuni, Bolivia - ZN 5 Uyuni 2014
Sequencing StatusPermanent Draft
Sequencing CenterUniversity of Alicante
Published?N
Use PolicyOpen

Dataset Contents
Total Genome Size69488854
Sequencing Scaffolds8
Novel Protein Genes8
Associated Families1

Dataset Phylogeny
Taxonomy GroupsNumber of Scaffolds
All Organisms → Viruses → Predicted Viral1
Not Available5
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kirjokansivirales → Pyrstoviridae → Hatrivirus → Hatrivirus HATV32

Ecosystem and Geography

Ecosystem Assignment (GOLD)
NameNon-Marine Hypersaline Water Viral Communities From Salar Of Uyuni 2014 (Chile)
TypeEnvironmental
TaxonomyEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Unclassified → Hypersaline Water → Non-Marine Hypersaline Water Viral Communities From Salar Of Uyuni 2014 (Chile)

Alternative Ecosystem Assignments
Environment Ontology (ENVO)Unclassified
Earth Microbiome Project Ontology (EMPO)Free-living → Saline → Hypersaline (saline)

Location Information
LocationSalar Uyuni, Bolivia
CoordinatesLat. (o)-20.333333Long. (o)-67.7Alt. (m)N/ADepth (m)N/A
Location on Map
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Associated Families

FamilyCategoryNumber of Sequences3D Structure?
F079661Metagenome115Y

Associated Scaffolds

ScaffoldTaxonomyLengthIMG/M Link
Ga0080113_1004736All Organisms → Viruses → Predicted Viral1209Open in IMG/M
Ga0080113_1005707Not Available1144Open in IMG/M
Ga0080113_1010438Not Available951Open in IMG/M
Ga0080113_1015313All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kirjokansivirales → Pyrstoviridae → Hatrivirus → Hatrivirus HATV3835Open in IMG/M
Ga0080113_1016843Not Available805Open in IMG/M
Ga0080113_1022531Not Available721Open in IMG/M
Ga0080113_1027120All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kirjokansivirales → Pyrstoviridae → Hatrivirus → Hatrivirus HATV3669Open in IMG/M
Ga0080113_1036117Not Available588Open in IMG/M

Sequences

Scaffold IDProtein IDFamilySequence
Ga0080113_1004736Ga0080113_10047363F079661MARTTIEIPAELRDKLKDARKPHESNYGDTIERLLNEGSGGQLWTEQEIRGMAEKEAREVVEALQR*
Ga0080113_1005707Ga0080113_10057071F079661MTRTTIEIPSELRDKLKVERKPHESNYGDTIERLLNDGSGGKLWTEKEIKGIAERQAREVVEALQR*
Ga0080113_1010438Ga0080113_10104384F079661MSRTTIEIPESTRDKLKQERQPHESNYGDTIERLLNDGSGGQLWTKREIQDLVQREIEQHTRR*
Ga0080113_1015313Ga0080113_10153132F079661MTRTTIQIPESTRDKLKAERKSHENNYGDTIERLLNTDTGGQLWTQREIEDIIDRRIEESRRR*
Ga0080113_1016843Ga0080113_10168432F079661LDRVRPMAELMSRTTIEVPENIRDQLKDERKPHESNYGDTIERLLNNDTGGQLWTERELEDMIDRRIEEVSRR*
Ga0080113_1022531Ga0080113_10225312F079661MSRTSIQIPESVRDKLRDERKPHESNYGETIERLLGEAGGQLWTEQEIRGLVQREIEKTQRR*
Ga0080113_1027120Ga0080113_10271202F079661MSRTTIEIPSDLRDKLKAERKPHESNYGDTIERLLNDSDGGQLWTKREIQDVVQREIEEHTRR*
Ga0080113_1036117Ga0080113_10361171F079661RWWRMSERTTIELPESIRDDLRDERLPHESNYGETIARLLGNHSTGQLWTEQELNDLIDRRIEAVANHGR*
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