Sample 3300007092

Basic Information
IMG/M Taxon OID	3300007092 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0117787 \| Gp0124820 \| Ga0101561
Sample Name	Marine sponge Stylissa sp. microbiome, Papua New Guinea CO2seep, Dobu 'control', st7dc
Sequencing Status	Finished
Sequencing Center	University of New South Wales
Published?	N
Use Policy	Open

Basic Information

IMG/M Taxon OID

3300007092 Open in IMG/M

GOLD Reference
(Study | Sequencing Project | Analysis Project)

Gs0117787 | Gp0124820 | Ga0101561

Sample Name

Marine sponge Stylissa sp. microbiome, Papua New Guinea CO2seep, Dobu 'control', st7dc

Sequencing Status

Finished

Sequencing Center

University of New South Wales

Published?

Use Policy

Open

Dataset Contents
Total Genome Size	95072257
Sequencing Scaffolds	56
Novel Protein Genes	63
Associated Families	25

Dataset Contents

Total Genome Size

95072257

Sequencing Scaffolds

Novel Protein Genes

Associated Families

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Porifera → Demospongiae → Heteroscleromorpha → Haplosclerida → Niphatidae → Amphimedon → Amphimedon queenslandica	2
Not Available	53
All Organisms → cellular organisms → Eukaryota → Opisthokonta	1

Dataset Phylogeny

Taxonomy Groups

Number of Scaffolds

All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Porifera → Demospongiae → Heteroscleromorpha → Haplosclerida → Niphatidae → Amphimedon → Amphimedon queenslandica

Not Available

All Organisms → cellular organisms → Eukaryota → Opisthokonta

Ecosystem Assignment (GOLD)
Name	Seawater And Marine Sponges Microbial Communities From Papua New Guinea Co2 Seeps
Type	Host-Associated
Taxonomy	Host-Associated → Porifera → Unclassified → Unclassified → Unclassified → Stylissa Sp. (Marine Sponge) → Seawater And Marine Sponges Microbial Communities From Papua New Guinea Co2 Seeps

Ecosystem Assignment (GOLD)

Name

Seawater And Marine Sponges Microbial Communities From Papua New Guinea Co2 Seeps

Type

Host-Associated

Taxonomy

Host-Associated → Porifera → Unclassified → Unclassified → Unclassified → Stylissa Sp. (Marine Sponge) → Seawater And Marine Sponges Microbial Communities From Papua New Guinea Co2 Seeps

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	Unclassified
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline)

Alternative Ecosystem Assignments

Environment Ontology (ENVO)

Unclassified

Earth Microbiome Project Ontology (EMPO)

Free-living → Saline → Water (saline)

Location Information
Location	Dobu 'control' site, Papua New Guinea
Coordinates	Lat. (^o)	-9.752083	Long. (^o)	150.854133	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Location Information

Location

Dobu 'control' site, Papua New Guinea

Coordinates

Lat. (^o)

-9.752083

Long. (^o)

150.854133

Alt. (m)

N/A

Depth (m)

N/A

Location on Map

Zoom:

Family	Category	Number of Sequences	3D Structure?
F007683	Metagenome / Metatranscriptome	346	Y
F013612	Metagenome / Metatranscriptome	269	Y
F015565	Metagenome / Metatranscriptome	253	Y
F017963	Metagenome / Metatranscriptome	237	Y
F020857	Metagenome / Metatranscriptome	221	Y
F022150	Metagenome / Metatranscriptome	215	Y
F023046	Metagenome / Metatranscriptome	211	Y
F024258	Metagenome / Metatranscriptome	206	Y
F035204	Metagenome / Metatranscriptome	172	Y
F038110	Metagenome / Metatranscriptome	166	Y
F041044	Metagenome / Metatranscriptome	160	Y
F043240	Metagenome / Metatranscriptome	156	Y
F051941	Metagenome / Metatranscriptome	143	N
F059684	Metagenome / Metatranscriptome	133	Y
F063409	Metagenome / Metatranscriptome	129	Y
F068499	Metagenome / Metatranscriptome	124	Y
F069743	Metagenome / Metatranscriptome	123	Y
F073151	Metagenome / Metatranscriptome	120	Y
F074458	Metagenome / Metatranscriptome	119	Y
F076933	Metagenome / Metatranscriptome	117	Y
F083784	Metagenome	112	Y
F085218	Metagenome	111	Y
F098755	Metagenome / Metatranscriptome	103	Y
F098759	Metagenome / Metatranscriptome	103	Y
F100481	Metagenome	102	N

Family

Scaffold	Taxonomy	Length	IMG/M Link
Ga0101561_1005819	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Porifera → Demospongiae → Heteroscleromorpha → Haplosclerida → Niphatidae → Amphimedon → Amphimedon queenslandica	1378	Open in IMG/M
Ga0101561_1006412	Not Available	1325	Open in IMG/M
Ga0101561_1008408	Not Available	1181	Open in IMG/M
Ga0101561_1011348	Not Available	1048	Open in IMG/M
Ga0101561_1013312	Not Available	988	Open in IMG/M
Ga0101561_1014136	Not Available	967	Open in IMG/M
Ga0101561_1016493	Not Available	910	Open in IMG/M
Ga0101561_1017041	Not Available	899	Open in IMG/M
Ga0101561_1017345	Not Available	893	Open in IMG/M
Ga0101561_1017446	All Organisms → cellular organisms → Eukaryota → Opisthokonta	891	Open in IMG/M
Ga0101561_1017893	Not Available	881	Open in IMG/M
Ga0101561_1019290	Not Available	855	Open in IMG/M
Ga0101561_1020096	Not Available	841	Open in IMG/M
Ga0101561_1020671	Not Available	833	Open in IMG/M
Ga0101561_1023857	Not Available	786	Open in IMG/M
Ga0101561_1024941	Not Available	772	Open in IMG/M
Ga0101561_1025626	Not Available	764	Open in IMG/M
Ga0101561_1025628	Not Available	763	Open in IMG/M
Ga0101561_1026745	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Porifera → Demospongiae → Heteroscleromorpha → Haplosclerida → Niphatidae → Amphimedon → Amphimedon queenslandica	750	Open in IMG/M
Ga0101561_1027191	Not Available	745	Open in IMG/M
Ga0101561_1027194	Not Available	745	Open in IMG/M
Ga0101561_1030795	Not Available	706	Open in IMG/M
Ga0101561_1030931	Not Available	704	Open in IMG/M
Ga0101561_1030957	Not Available	704	Open in IMG/M
Ga0101561_1031448	Not Available	700	Open in IMG/M
Ga0101561_1032485	Not Available	691	Open in IMG/M
Ga0101561_1033369	Not Available	683	Open in IMG/M
Ga0101561_1034303	Not Available	674	Open in IMG/M
Ga0101561_1035048	Not Available	668	Open in IMG/M
Ga0101561_1035749	Not Available	662	Open in IMG/M
Ga0101561_1036629	Not Available	655	Open in IMG/M
Ga0101561_1037770	Not Available	646	Open in IMG/M
Ga0101561_1038061	Not Available	644	Open in IMG/M
Ga0101561_1038850	Not Available	637	Open in IMG/M
Ga0101561_1039000	Not Available	636	Open in IMG/M
Ga0101561_1039012	Not Available	636	Open in IMG/M
Ga0101561_1039886	Not Available	630	Open in IMG/M
Ga0101561_1041256	Not Available	619	Open in IMG/M
Ga0101561_1042865	Not Available	608	Open in IMG/M
Ga0101561_1044037	Not Available	601	Open in IMG/M
Ga0101561_1044110	Not Available	600	Open in IMG/M
Ga0101561_1045438	Not Available	591	Open in IMG/M
Ga0101561_1045739	Not Available	589	Open in IMG/M
Ga0101561_1045839	Not Available	589	Open in IMG/M
Ga0101561_1045973	Not Available	588	Open in IMG/M
Ga0101561_1048862	Not Available	571	Open in IMG/M
Ga0101561_1049397	Not Available	568	Open in IMG/M
Ga0101561_1049573	Not Available	567	Open in IMG/M
Ga0101561_1054330	Not Available	541	Open in IMG/M
Ga0101561_1055449	Not Available	535	Open in IMG/M
Ga0101561_1056256	Not Available	531	Open in IMG/M
Ga0101561_1056497	Not Available	530	Open in IMG/M
Ga0101561_1056669	Not Available	529	Open in IMG/M
Ga0101561_1059394	Not Available	516	Open in IMG/M
Ga0101561_1060048	Not Available	513	Open in IMG/M
Ga0101561_1063356	Not Available	500	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0101561_1005819	Ga0101561_10058194	F023046	INGVRNKRSHLVGPPFPEFKAHFSATAGWHFLDLTRHLLIGGVVRVTYLLSMAEITSGSSFEPNKPREQKLGYV*
Ga0101561_1006412	Ga0101561_10064122	F017963	MSLPKGANSMAVSGLVLRSDLVGTGRAISVLFGINGARNKRSHLVGPPFPEFKARFSATEGWHFSRDLTRHLVIGGCGHSHVSVKYG*
Ga0101561_1008408	Ga0101561_10084081	F020857	VLFLQDYCALQELLMKMNFTIAAAPPFVHPMMSLLATPTHSVWRYGFFSEPTWWRQVSKYGNLKRCESFSGDIESLDPKF*
Ga0101561_1011348	Ga0101561_10113481	F017963	VHLMGANNMAASGLVCRNNLVGTGRAIFFLFGINGFKDKQSHLVGPPYQVFNARFSAKAGWHFLRDIARCLLIGGCGQSHVFAKDG*
Ga0101561_1013312	Ga0101561_10133123	F022150	FGINGVRNKRSHLVGPPFPEFKVRFSATAGWHFLRDLTRHLLIAGCDHSYVSVKYG*
Ga0101561_1014136	Ga0101561_10141362	F022150	IHTDTHNRAISILFGINGVRNQRSHLVGPPFPEFKARFSATAGWHFLRDLTMCLLIGGCGQSHVSAKHG*
Ga0101561_1016493	Ga0101561_10164932	F015565	MGWCTTQYKMQLFCAKNVKESRKFELACEEEKHFDCLATFWFGAFAMLFSAIGCVFRHENTRK*
Ga0101561_1017041	Ga0101561_10170411	F015565	MLLFCAKTIVKESRKFELARLKKKKEKHFGRLATFWFGAFAMLFSATGCAFRHENTRK*
Ga0101561_1017345	Ga0101561_10173451	F059684	GSQFTGSHQDVSVEGQKRAYTVHFTSYKAVARSRRQSRDRK*
Ga0101561_1017345	Ga0101561_10173452	F068499	EMYSIREFSAFYSHFQVTSGQMTSLPGHFRSPEVT*
Ga0101561_1017446	Ga0101561_10174461	F085218	MLELKFAIYHRAASLPSQASYAELAEESLTIPGSLQTLP
Ga0101561_1017893	Ga0101561_10178931	F041044	MLKWKPYKGRLLACNYIYAKRIEMALPVPTKLFLQLSPDTAIPFAPFGCTHLPVLLFLLVQNPFSKNIAGSDIMK*
Ga0101561_1019290	Ga0101561_10192901	F035204	MPPCEPVFQVIESGRDGENLEKLSMEATVLNVHYVIHIIGFHVTFNET*
Ga0101561_1020096	Ga0101561_10200962	F074458	VVQWFFEMAGIPSAAFIFDDDLATELETYAKANIKLLLRVANVAPGSGDTFSKSGLLHWYEWYQE*
Ga0101561_1020671	Ga0101561_10206712	F074458	MPFMQSLTAKWFFKMAGVLSAMFVFDDDLATRLETYAKPNIELLLRVANVALASGNTFSESGLLHW*
Ga0101561_1023857	Ga0101561_10238571	F073151	LVSEDQLYVSGFEKRGNFAQNTKFWHFSSYLHFKAVGASDFILGFGAHQAFCFTNPTFEAIDSLLSEVVAVKPKV*
Ga0101561_1024941	Ga0101561_10249411	F024258	MRLQVNCACAIGTSLNLDLLCVAENGVVLELHRTAASQNCHSYQFADKRGERGYYDESDVVLCMN*
Ga0101561_1025626	Ga0101561_10256261	F073151	HFSSYHHFKAVRASDFILGLGAHQAFCFTNPTFEAVDSLLSEAGAVKPKV*
Ga0101561_1025628	Ga0101561_10256281	F022150	VGPPFPEFKARFSATAGWHFSRDLTRRLLIGGCIQSHVSAKHG*
Ga0101561_1026745	Ga0101561_10267453	F063409	EGVRTNPPCSLAKFIFNETAAVQGTIIQLCSGIVTDGIQAIMQLLQGVVTYTSPVEVFAIGIENFDR*
Ga0101561_1027191	Ga0101561_10271912	F022150	RSHLVGPPFPEFKARFSATAGWHFSRDFTRRLLIGGCGQSHVSVKDG*
Ga0101561_1027194	Ga0101561_10271942	F069743	MQSHTIHLSIAPGDYGALTGFSLGPFSNSVRQISFNVSILNGVIPEDDETFIANLTLLPADQARLGNRVTVQPDSATVTILDVQGKILAV*
Ga0101561_1030795	Ga0101561_10307951	F017963	SMAASGLVFRSDLVGTGRAISIPFGINGVRNQRSHLVWPPFPEFKAHFSATAGWHFSRDLTRYLLIGGCGQSHVSAKYG*
Ga0101561_1030931	Ga0101561_10309311	F023046	LVGPPFPEFKACFSTMAGWHFSRDLTRHLLIGVCGQSHDLLSMAEITSESSFEPNNPTEQTLGYV*
Ga0101561_1030957	Ga0101561_10309571	F020857	SYIRDIFVLFLQDYCALQELLMKMNFTLAVAPPFVHPMTSLPAMPTHSVRKYGFFSEPTRRRQVAKYGNLKRCESLSFSGDIESLKPSKL*
Ga0101561_1031448	Ga0101561_10314482	F017963	VYPKGANSMAASGLIFRNDLVGTGRAISILFGINGVRNERSHLVGPPFPEFKACFSATAGWHFSRDLTRRLLIVGCGQSHVSAKYG*
Ga0101561_1032485	Ga0101561_10324851	F068499	LVGSEMYSIRQFSAFYSHLQVTSGQITSLPGHFRSPEFT*
Ga0101561_1033369	Ga0101561_10333691	F059684	YLTGCHLEVAVEGQKCTYTVHFTSYKAVARRRRQLRDRK*
Ga0101561_1034303	Ga0101561_10343031	F024258	MRLHVNYACAIGTRLNLDLLCVAQNGVVLELRKIAASQNCHSCQFANKRAERGYYDESDIVL*
Ga0101561_1035048	Ga0101561_10350482	F013612	SGYIRHETFSFMMSLPAMSLGLRFCVSRKGETGGGGWVHPKGANSMAASGLVLRSDLVGTERAISVLLGINGVRNQRSHLVGPPFPEFKAHFSATAGWHFSRDLTRHLLIGGCGHSHISVKYG*
Ga0101561_1035749	Ga0101561_10357492	F007683	MSFPAMSSGLRFCGTGGGRWVHPRGANNMAASGLVFRNYLVGIGRAISILFGINGVRNK*
Ga0101561_1036629	Ga0101561_10366292	F015565	MLLFCAKTIVKDSRKFELARLKKKKKEKHFGRLVTFWFGTFAMHFSTTGCVFRHENTRR*
Ga0101561_1037770	Ga0101561_10377701	F073151	WHFSSYHHFKAVRASDFILGLEAHQAFCFTNPTFEAVDRLLSEAVAVKPKV*
Ga0101561_1038061	Ga0101561_10380611	F098759	CLSLPTLVPQGYSTLFVSILSGESKELITLMKAWGYSGEKASGMISIRLV*
Ga0101561_1038850	Ga0101561_10388502	F020857	DYCALQELLMKMNFTVAVAPPFCASNDVTSSYAHSLVQKYGFLSEPTWRRQVAKYGHLKCCESLSFPGDIESLEPSKF*
Ga0101561_1039000	Ga0101561_10390002	F083784	QLDSSHIPYLSLHAGMDFNDTQPFEVTMAAGTTVVTADIPIVDDEINEAEEEFVVVLEVVSNTTNPVEFTAQTTVCRIPPSDCK*
Ga0101561_1039012	Ga0101561_10390122	F098755	MDTEKQRKRRRDGTRLTESGNTRREQLLVMPTESLTNRKWLPGELWNGLECRRPGWFLDMKYQ
Ga0101561_1039886	Ga0101561_10398861	F043240	AQEKPWNKTGGMTPWMASTASAGALKSGESETTPPIIARLRNVTCPPP*
Ga0101561_1041256	Ga0101561_10412561	F023046	FGINGVRNKRSHLVGPPFPEFKACFSATAGWHFSSDLARHLLIGGCGHSTYLLSMAEITSGSSFEHNNQTEQKLGYV*
Ga0101561_1042865	Ga0101561_10428651	F051941	MATSFKNMIYDLTPTTSEKTVYGVPTDSHSIINAFYVNNTDPFSSIFVEVRLDRGPNRLYVASTTSLFSVELASNQYLNLLTGPLVLEGGDKLVFTTNTTGRVQGTIAAMQVNREDQETTPTGSV*
Ga0101561_1043287	Ga0101561_10432871	F076933	MIYANCGAIAVITSTTYMTYMTYMNIMELFDEYSAVFSREVIRSLIMTPTSILNDIILSMETERSAKACC*
Ga0101561_1044037	Ga0101561_10440371	F022150	GINGVRNQRSHLVGPPFPEFKARFSATAGWHFLRDLTRCLLIGGCGQSHGSAKHG*
Ga0101561_1044110	Ga0101561_10441101	F098759	RPVLRLCLPLPTLVPQGYSALFVSILSGESKELITMMKARGYSGEKASGMISIRLV*
Ga0101561_1045438	Ga0101561_10454381	F074458	VNRRRAPFWAVTYCQMWFFEMAGIPSAAFVFDDDLATELETYAKANVELLSRVVNVTLASGDTFSESGLLHW*
Ga0101561_1045739	Ga0101561_10457391	F038110	MIEGCSPAVSEDRGHTLNVDGTESLAISICDVRYKHMNLKIILLLIHCLVDMPTSQARLSYLAMSERYHIVRVMVSENR*
Ga0101561_1045839	Ga0101561_10458391	F023046	GVRNKRSHLVGPPFPEFKARFSATAGWHFSRDLPRRLIIGGVVTVTYLLRMAEITSGSSLEPNNLTEQKLGYV*
Ga0101561_1045973	Ga0101561_10459732	F059684	RHFTGSHLEVAVEGLKLAYTEHFTSYMAVARSRRLTW*
Ga0101561_1047760	Ga0101561_10477601	F076933	TYMTIVELFDEYSAPFSPEVIRSLIMKLTSILNDIILSMETGRSTKACC*
Ga0101561_1048862	Ga0101561_10488621	F074458	MAGIPSATFVFDDDRATKLETYAKANVKLFLRVANVALASGDTFSESGLLHR*
Ga0101561_1049397	Ga0101561_10493971	F035204	MPPCKPVFQVIELGHDGENLELSMESVVLNMHYVIGFHNFNET*
Ga0101561_1049573	Ga0101561_10495731	F035204	MPPCEPVFQVMESGRDGENLEKLSMETTVLNVHYVIHIIRAT*
Ga0101561_1054074	Ga0101561_10540741	F076933	MIYANCIAIAVITSTTYMTIVELLDDFSAPISPEVIRSLIVTPTSILNDIILSMETERSAKACC*
Ga0101561_1054176	Ga0101561_10541761	F100481	IVSVTMPLSSIKDLAVAISTRAGPAEDDPPLYELGSKPVQAVCKGESGALN*
Ga0101561_1054330	Ga0101561_10543301	F015565	MLLFCAKTIVKESRKFELARLKKKKKEKHFGRLATFWFGAFAMLFSATGCVFHHENT*
Ga0101561_1055449	Ga0101561_10554491	F017963	VNLKGENSMAVSGLVVRSDLVGTGRAISILFGINGVRSKRSHLVGPPFPEFKACFSATAGWHFSRDLTRCLLIGGCGQSHLSAKHG*
Ga0101561_1056256	Ga0101561_10562561	F015565	MLLFCAKNIMKESPTFELARLKKKKKEKHFDRLVTSWFGVFAVLCSASGCVVRHENTRR*
Ga0101561_1056497	Ga0101561_10564971	F085218	MLELKFVIYYRAGKSPLTGFYGVLAEESLTRPGFLQTLTAHQQYFYFSNLA*
Ga0101561_1056669	Ga0101561_10566692	F022150	PFLFFFGINGVRNKRSHFIGPPFPGFKACFSAMAGWHFSRDLTRCLLIDGCGQSHVSVKDG*
Ga0101561_1059394	Ga0101561_10593941	F017963	VHPKGANSMAVSGLVFRSDLVGPGRAISILFGINRVRNQRSHLVGPPFPEFKARFSATAGWHISRDLTRHLLIGGCGQSHVSAKHG*
Ga0101561_1060048	Ga0101561_10600482	F022150	VGPPFPEFKARFSATAGWHFLRDLTRHLVIGGCSRSHVSAKHG*
Ga0101561_1061059	Ga0101561_10610592	F076933	MIYANCGAIAVITSMTYMTIVELFDEYSAPFSPEVIRSLIMTPTSILNDIILSMETERSAN*
Ga0101561_1062209	Ga0101561_10622092	F073151	YHHFKAVRASDFILGLEAHQAFCFTNPTFEVVDSLLSEAVTVKPKV*
Ga0101561_1063356	Ga0101561_10633561	F024258	ACAIGTRLNLDLFFVAQNGVMLQLRGTAASQNRHSCQFSDKRAERGYYNQSDVVLCMK*

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300007092: Marine sponge Stylissa sp. microbiome, Papua New Guinea CO2seep, Dobu 'control', st7dc

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences