NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Sample 3300007170

3300007170: Active sludge microbial communities from Klosterneuburg, Austria - Klosterneuburg WWTP active sludge MT KNB_A4L_L (Metagenome Metatranscriptome)



Overview

Basic Information
IMG/M Taxon OID3300007170 Open in IMG/M
GOLD Reference
(Study | Sequencing Project | Analysis Project)		Gs0103597 | Gp0123869 | Ga0099774
Sample NameActive sludge microbial communities from Klosterneuburg, Austria - Klosterneuburg WWTP active sludge MT KNB_A4L_L (Metagenome Metatranscriptome)
Sequencing StatusPermanent Draft
Sequencing CenterDOE Joint Genome Institute (JGI)
Published?N
Use PolicyOpen

Dataset Contents
Total Genome Size31354434
Sequencing Scaffolds6
Novel Protein Genes6
Associated Families6

Dataset Phylogeny
Taxonomy GroupsNumber of Scaffolds
Not Available5
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
NameActive Sludge And Wastewater Microbial Communities From Klosterneuburg, Austria
TypeEngineered
TaxonomyEngineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge → Active Sludge And Wastewater Microbial Communities From Klosterneuburg, Austria

Alternative Ecosystem Assignments
Environment Ontology (ENVO)Unclassified
Earth Microbiome Project Ontology (EMPO)Free-living → Non-saline → Water (non-saline)

Location Information
LocationKlosterneuburg, Austria
CoordinatesLat. (o)48.3Long. (o)16.2Alt. (m)N/ADepth (m)N/A
Location on Map
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Associated Families

FamilyCategoryNumber of Sequences3D Structure?
F002557Metagenome / Metatranscriptome548Y
F025291Metagenome / Metatranscriptome202N
F036109Metagenome / Metatranscriptome170Y
F051952Metatranscriptome143N
F059886Metagenome / Metatranscriptome133Y
F070166Metatranscriptome123N

Associated Scaffolds

ScaffoldTaxonomyLengthIMG/M Link
Ga0099774_1010607Not Available761Open in IMG/M
Ga0099774_1017219Not Available1336Open in IMG/M
Ga0099774_1042220Not Available1083Open in IMG/M
Ga0099774_1059904Not Available548Open in IMG/M
Ga0099774_1090807All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora559Open in IMG/M
Ga0099774_1111365Not Available623Open in IMG/M

Sequences

Scaffold IDProtein IDFamilySequence
Ga0099774_1010607Ga0099774_10106072F059886VIYASRTAFADLRGERHQLSPTIPRSPGIIPAVLSVAPFRPLRFD
Ga0099774_1017219Ga0099774_10172193F051952VYTDEVVTLEETCILFLSFEKMVQKMSQHEAYRAKYGTEVFTFRAVFTSLEDVVSANPQDRLTRMREVYGFYRGKLFSRRYYFSVRGQLTRELRLKVLTRFPKKFKPKAFVGKGYGDHGTAKEMAYDGSPSWQEVAMADTNLGTSDTSRFDYLEFLFRNFNTSRVQLFPQKKPGEKLHSSSN*
Ga0099774_1042220Ga0099774_10422201F070166MNLNNYIVQIHRKTKRITLQRFLVSKIAYGKDFSLIELAALFHNQLWLQTKCSTDVHFREKFGRSLEVLAKILKECNFSRGLQSGTISRMKAKVLALEGDFLIPQRNLPNLEAQLRNSISTKWRKQEGVEINKLPPKSFIGKGYRDHGTAPKPEEDGSPSWQEVGSEFSNLEREHTEAMLFLLKVYDNDPNISIKERLEGIKRA
Ga0099774_1059904Ga0099774_10599041F025291KQPNQKRTNKNSNKTKHHMVNLRKEINIFRDRAWRVITYNYHLGDHSSTGLYTLNVGADQRYMTFQTLLTTDEFQNMSVVYNEFKIHKAVFTSLPTSNSNRLPYLYVDIEPSTSAGVNPNNVRVCADDSSRIFAPKALNAQSCEWNLQGVGPNFNVWLDTGATIPGQFQIGNYIFGSIPMNL
Ga0099774_1090807Ga0099774_10908071F036109MPGLRNRKILMPFISINLFLTMRMLSMIVPVLGAAMIMLQLDRHFNFSFFDY
Ga0099774_1111365Ga0099774_11113651F002557VLMHSSNHYPLGNCDSPKPETSLDYLTRLGAVSNRSSSPSSFFAFTDSARTLPEELVNPA
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