NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Sample 3300007238

3300007238: Non-marine hypersaline water viral communities from Salar Uyuni, Bolivia - ZN24 UYUNI 14



Overview

Basic Information
IMG/M Taxon OID3300007238 Open in IMG/M
GOLD Reference
(Study | Sequencing Project | Analysis Project)		Gs0116222 | Gp0120436 | Ga0080112
Sample NameNon-marine hypersaline water viral communities from Salar Uyuni, Bolivia - ZN24 UYUNI 14
Sequencing StatusPermanent Draft
Sequencing CenterUniversity of Alicante
Published?N
Use PolicyOpen

Dataset Contents
Total Genome Size88111586
Sequencing Scaffolds22
Novel Protein Genes22
Associated Families4

Dataset Phylogeny
Taxonomy GroupsNumber of Scaffolds
Not Available16
All Organisms → Viruses → Predicted Viral2
All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria1
All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Natrialbales → Natrialbaceae1
All Organisms → Viruses → unclassified bacterial viruses → environmental samples → environmental Halophage eHP-321
All Organisms → Viruses1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
NameNon-Marine Hypersaline Water Viral Communities From Salar Of Uyuni 2014 (Chile)
TypeEnvironmental
TaxonomyEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Unclassified → Hypersaline Water → Non-Marine Hypersaline Water Viral Communities From Salar Of Uyuni 2014 (Chile)

Alternative Ecosystem Assignments
Environment Ontology (ENVO)Unclassified
Earth Microbiome Project Ontology (EMPO)Free-living → Saline → Hypersaline (saline)

Location Information
LocationSalar Uyuni Bolivia
CoordinatesLat. (o)-20.333333Long. (o)-67.7Alt. (m)N/ADepth (m)N/A
Location on Map
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Associated Families

FamilyCategoryNumber of Sequences3D Structure?
F003128Metagenome506Y
F027696Metagenome194N
F066493Metagenome126Y
F079661Metagenome115Y

Associated Scaffolds

ScaffoldTaxonomyLengthIMG/M Link
Ga0080112_1000001Not Available41373Open in IMG/M
Ga0080112_1001497All Organisms → Viruses → Predicted Viral1834Open in IMG/M
Ga0080112_1001553Not Available1818Open in IMG/M
Ga0080112_1003455Not Available1460Open in IMG/M
Ga0080112_1003912All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria1405Open in IMG/M
Ga0080112_1004417All Organisms → Viruses → Predicted Viral1352Open in IMG/M
Ga0080112_1012178All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Natrialbales → Natrialbaceae979Open in IMG/M
Ga0080112_1012462Not Available972Open in IMG/M
Ga0080112_1012743Not Available964Open in IMG/M
Ga0080112_1021001Not Available805Open in IMG/M
Ga0080112_1021444Not Available800Open in IMG/M
Ga0080112_1024584All Organisms → Viruses → unclassified bacterial viruses → environmental samples → environmental Halophage eHP-32758Open in IMG/M
Ga0080112_1031705Not Available684Open in IMG/M
Ga0080112_1035783All Organisms → Viruses651Open in IMG/M
Ga0080112_1040748Not Available615Open in IMG/M
Ga0080112_1042468Not Available604Open in IMG/M
Ga0080112_1050506Not Available556Open in IMG/M
Ga0080112_1051310Not Available551Open in IMG/M
Ga0080112_1053826Not Available539Open in IMG/M
Ga0080112_1058769Not Available515Open in IMG/M
Ga0080112_1059711Not Available511Open in IMG/M
Ga0080112_1060003Not Available510Open in IMG/M

Sequences

Scaffold IDProtein IDFamilySequence
Ga0080112_1000001Ga0080112_100000139F079661MTKTTIEIPSELRDELRNERKPHESSYADTIERLLGMSSGGQLWTEAEIRDIVRDEIESQVRQH*
Ga0080112_1001497Ga0080112_10014972F079661MTRTSIQIPESVRDKLRDERKPHESNYGDTIERLLGEAGGQLWTEQEIRDLVQREIENASRR*
Ga0080112_1001553Ga0080112_10015531F066493RGVVAVSQQRDWADGLVDVVDELVSDHSAEGAIDRLQTRRQTSSDELQARCNEAIAYIRREVIDDET*
Ga0080112_1003455Ga0080112_10034552F079661MSRTTIEIPESVRDKLRDERKPHESNYGDTIERLLGEASGRLWTEQEIRDVVQREIEKTQRR*
Ga0080112_1003912Ga0080112_10039122F079661MSERTTIELPESIRDDLRDERLPHESNYGETIARLLGNHSTGQLWTEQELKDLIDRRIEAVATHGR*
Ga0080112_1004417Ga0080112_10044172F079661MNKTTIELPVPVRDKLRDERKPHESNYGDTIERLLGEAGGQLWTEQEIRDLVQREIEKTQRR*
Ga0080112_1012178Ga0080112_10121782F027696LLPWVHYYHVEGDKMSTTALTQVATNVDISEHDGERVIDFDISANTDYEIQSCVMVDEDDQVVEAAVRFGRIEERPALGIGVPILARAWESMATEACGVGRLDQTALEADLSDFGHVVPHLRVERENVEAYDLETLSLAAFASAVSELATLVSDVLRADDDTIDTEIDDYL*
Ga0080112_1012462Ga0080112_10124622F079661MTRTTIEIPESVRDQLKEERKSHESNYGDTIERLLGESSGGQLWTEQELRDMISREIEKAQRGR*
Ga0080112_1012743Ga0080112_10127434F079661MSRTTIEIPSDLRDKLKAERKPHESNYGETIERLLNDSDGGQLWTKREIQDVVQREMEQHTRR*
Ga0080112_1021001Ga0080112_10210012F079661SKTTIEIPESVRDQLKEERKSHESNYGDTIERLLGESSGGQLWTEQELRDMISREIEKAQRGR*
Ga0080112_1021444Ga0080112_10214441F079661MSRTSIQIPESVRDKLREERKPHESNYGDTIERLLGDAGGQLWTEQEIRDLVQREIENASRR*
Ga0080112_1024584Ga0080112_10245843F079661MARTSIQIPESVRDKLREERKPHESNYGETIERLLGEAGGRLWTEQEIRDLVQREIENASRR*
Ga0080112_1031705Ga0080112_10317052F066493DGRMSQQREWDDGLVDVVDELVSEHSAEGAIDRLQTRRQTECDELQARCNEAIAYIRREVIDDES*
Ga0080112_1035783Ga0080112_10357831F079661MSKTTIEIPESVRDQLKEERKSHESNYGDTIERLLGEASGRLLTEPEIEDLVERKFREARR*
Ga0080112_1040748Ga0080112_10407482F066493MSQQREWDDGLIDVADELVSEYSADGAIERLQTRRQTTNDELQARCNEAIAYIRREVIDDES*
Ga0080112_1042468Ga0080112_10424681F079661MSRTTIEVPESIRDQLKDERKPHESNYGDTIERLLNNDTGGQLWTERELED
Ga0080112_1050506Ga0080112_10505062F003128MQVEIEVDPEDIVKKKADDRGRVTLGAEYAGKDVRVAVVEVEEE*
Ga0080112_1051310Ga0080112_10513102F079661MHRVRNELLPTQRMSKTTIELEESTKEQLRQDRLSHESNYNETIERLLGEASGRLLSEPEIEDLVERKIEEAQRR*
Ga0080112_1053826Ga0080112_10538261F079661MTRTSIQIPESVRDKLREERKPHESNYGETIERLLGEGGGKLWTEQEIKDLIDKEIRSHQRR*
Ga0080112_1058769Ga0080112_10587691F079661MDRTTIEIPSELRDKLKAERKPHESNYGDTIERLLNDGSGGQLWTKREIQDLVQREIEEHTRR*
Ga0080112_1059711Ga0080112_10597112F079661MTRTSIQIPESVRDKLRDERKPHESNYGDTIERLLGDAGGRLWTEQEIRDLVQREIENASRR*
Ga0080112_1060003Ga0080112_10600033F079661MSRTTIEVPKSIRDQLKDERKPHESNYGDTIRRLLNNDTGGQLWTERELEDIAERK
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