Sample 3300007241

3300007241: Wastewater effluent complex algal communities from Wisconsin, to seasonally profile nutrient transformation and Carbon sequestration - JI 7/17/14 B RNA (Eukaryote Community Metatranscriptome)

Overview

Basic Information
IMG/M Taxon OID	3300007241 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0114511 \| Gp0116020 \| Ga0075170
Sample Name	Wastewater effluent complex algal communities from Wisconsin, to seasonally profile nutrient transformation and Carbon sequestration - JI 7/17/14 B RNA (Eukaryote Community Metatranscriptome)
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	233608884
Sequencing Scaffolds	49
Novel Protein Genes	53
Associated Families	36

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	21
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea	6
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	3
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Urostylida → Pseudourostylidae → Pseudourostyla → Pseudourostyla cristata	2
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Sporadotrichida	1
All Organisms → cellular organisms → Eukaryota	3
All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	2
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	3
All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta	2
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Sporadotrichida → Halteriidae → Halteria → Halteria grandinella	1
All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → malvids → Brassicales → Brassicaceae → Coluteocarpeae → Noccaea → Noccaea caerulescens	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Oligohymenophorea	2
All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Coccolithales → Coccolithaceae → Coccolithus → Coccolithus braarudii	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Wastewater Effluent Complex Algal Communities From Wisconsin, To Seasonally Profile Nutrient Transformation And Carbon Sequestration
Type	Engineered
Taxonomy	Engineered → Wastewater → Nutrient Removal → Unclassified → Unclassified → Wastewater Effluent → Wastewater Effluent Complex Algal Communities From Wisconsin, To Seasonally Profile Nutrient Transformation And Carbon Sequestration

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	Unclassified
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline)

Location Information
Location	Milwaukee, Wisconsin, USA
Coordinates	Lat. (^o)	43.023	Long. (^o)	-87.895	Alt. (m)	N/A	Depth (m)	0
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F001488	Metagenome / Metatranscriptome	686	Y
F001904	Metagenome / Metatranscriptome	619	Y
F003009	Metagenome / Metatranscriptome	513	Y
F003081	Metagenome / Metatranscriptome	508	Y
F007073	Metagenome / Metatranscriptome	358	Y
F011523	Metagenome / Metatranscriptome	290	Y
F012917	Metagenome / Metatranscriptome	276	Y
F014742	Metagenome / Metatranscriptome	260	Y
F014836	Metagenome / Metatranscriptome	259	Y
F015656	Metagenome / Metatranscriptome	253	Y
F024036	Metagenome / Metatranscriptome	207	Y
F030134	Metagenome / Metatranscriptome	186	Y
F037074	Metagenome / Metatranscriptome	168	Y
F040484	Metagenome / Metatranscriptome	161	Y
F042570	Metagenome / Metatranscriptome	158	Y
F042753	Metagenome / Metatranscriptome	157	Y
F044934	Metagenome / Metatranscriptome	153	Y
F056539	Metagenome / Metatranscriptome	137	Y
F057919	Metagenome / Metatranscriptome	135	Y
F057990	Metagenome / Metatranscriptome	135	Y
F061006	Metagenome / Metatranscriptome	132	Y
F070166	Metatranscriptome	123	N
F073141	Metagenome / Metatranscriptome	120	Y
F081750	Metagenome / Metatranscriptome	114	Y
F084398	Metagenome / Metatranscriptome	112	N
F085198	Metagenome / Metatranscriptome	111	N
F085199	Metagenome / Metatranscriptome	111	Y
F085200	Metagenome / Metatranscriptome	111	N
F087278	Metagenome / Metatranscriptome	110	Y
F089931	Metagenome / Metatranscriptome	108	Y
F091427	Metagenome / Metatranscriptome	107	Y
F093912	Metagenome / Metatranscriptome	106	Y
F096705	Metagenome / Metatranscriptome	104	Y
F100652	Metagenome / Metatranscriptome	102	N
F102609	Metagenome / Metatranscriptome	101	Y
F102610	Metagenome / Metatranscriptome	101	Y

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
Ga0075170_1008865	Not Available	594	Open in IMG/M
Ga0075170_1010660	Not Available	619	Open in IMG/M
Ga0075170_1012708	Not Available	1034	Open in IMG/M
Ga0075170_1016316	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea	822	Open in IMG/M
Ga0075170_1027777	Not Available	629	Open in IMG/M
Ga0075170_1028204	Not Available	1109	Open in IMG/M
Ga0075170_1052812	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	861	Open in IMG/M
Ga0075170_1093841	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Urostylida → Pseudourostylidae → Pseudourostyla → Pseudourostyla cristata	550	Open in IMG/M
Ga0075170_1095639	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Sporadotrichida	1048	Open in IMG/M
Ga0075170_1103551	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Urostylida → Pseudourostylidae → Pseudourostyla → Pseudourostyla cristata	1063	Open in IMG/M
Ga0075170_1120006	Not Available	641	Open in IMG/M
Ga0075170_1193429	All Organisms → cellular organisms → Eukaryota	581	Open in IMG/M
Ga0075170_1231408	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea	604	Open in IMG/M
Ga0075170_1294498	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	835	Open in IMG/M
Ga0075170_1316185	All Organisms → cellular organisms → Eukaryota	603	Open in IMG/M
Ga0075170_1324681	Not Available	662	Open in IMG/M
Ga0075170_1341504	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea	624	Open in IMG/M
Ga0075170_1342159	Not Available	785	Open in IMG/M
Ga0075170_1364555	Not Available	615	Open in IMG/M
Ga0075170_1386495	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	572	Open in IMG/M
Ga0075170_1390225	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	839	Open in IMG/M
Ga0075170_1412606	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea	555	Open in IMG/M
Ga0075170_1416415	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta	583	Open in IMG/M
Ga0075170_1425809	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Sporadotrichida → Halteriidae → Halteria → Halteria grandinella	632	Open in IMG/M
Ga0075170_1439434	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → malvids → Brassicales → Brassicaceae → Coluteocarpeae → Noccaea → Noccaea caerulescens	585	Open in IMG/M
Ga0075170_1447894	Not Available	616	Open in IMG/M
Ga0075170_1450815	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea	669	Open in IMG/M
Ga0075170_1454760	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea	579	Open in IMG/M
Ga0075170_1470245	Not Available	830	Open in IMG/M
Ga0075170_1477256	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	520	Open in IMG/M
Ga0075170_1486247	Not Available	1021	Open in IMG/M
Ga0075170_1487184	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Oligohymenophorea	1406	Open in IMG/M
Ga0075170_1498276	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	728	Open in IMG/M
Ga0075170_1500600	Not Available	651	Open in IMG/M
Ga0075170_1503498	Not Available	611	Open in IMG/M
Ga0075170_1504048	Not Available	569	Open in IMG/M
Ga0075170_1531744	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	934	Open in IMG/M
Ga0075170_1532884	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Oligohymenophorea	1085	Open in IMG/M
Ga0075170_1536901	Not Available	643	Open in IMG/M
Ga0075170_1540366	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	622	Open in IMG/M
Ga0075170_1544988	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta	586	Open in IMG/M
Ga0075170_1546461	Not Available	1259	Open in IMG/M
Ga0075170_1547660	All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Coccolithales → Coccolithaceae → Coccolithus → Coccolithus braarudii	1181	Open in IMG/M
Ga0075170_1549823	All Organisms → cellular organisms → Eukaryota	604	Open in IMG/M
Ga0075170_1550288	Not Available	1046	Open in IMG/M
Ga0075170_1557055	Not Available	670	Open in IMG/M
Ga0075170_1565221	Not Available	1575	Open in IMG/M
Ga0075170_1565720	Not Available	1087	Open in IMG/M
Ga0075170_1567750	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales	3951	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0075170_1008865	Ga0075170_10088651	F087278	DRRTPEQKARDVENILNWKRNPKEHDSPETEPFKKIDQLLPEKPGQTPEDRANDIDNVLTWLRNGGIDEPKFGPNEPFRPTKNIDMPDKRSPTEKARDIENITNWVRNPKENDRPETEPFKKIDQLLPKKPGQSPEDRAKDIDNALTWVRNRGVDQVLPEPSSPFDSLSSLPIDRRTPEQKARDVENILNWKRNPKEH
Ga0075170_1010660	Ga0075170_10106601	F061006	WLRNFGVGEPQFVPEEPFKITKDVGLPDHRSPEQKANDLDEILSWVRNPRENDRPETESFKMIDQLLPQKPQQSPEDRAHDIDKVLTWVRNFSVEEPVFEPMLPMDHLRSISIDRRSPYEKARDVEAILHWKRNPNEEEGPETEPFKKMDQLLPKKPGQSPEERANDIDNTLTWLRNFGVGEPQFVPEEPFKITKDVGLPDHRSPE
Ga0075170_1012708	Ga0075170_10127081	F070166	MNLDNYVVQIHKRTKRITLQRFLISKIAYGEDFSLIELAALFHNQLWLQTKCQVDPHFKVKFGMTLEVIASFLKECNFSRGLQPATISRMKAKALTLEGDFLIPKRNLPNLEVQLRNSISTKWRKPEGIEVSKLPPKQHVGKGYRDHGTAQKPEIDGSPSWQEVGSEFGNLERESTELALQLLKIIEGKSNDSTIEQIKQIKRFIAVNEAIKRIHPNWRNTEIAEASKGKIRHEV*
Ga0075170_1016316	Ga0075170_10163162	F042570	ASKVLSLSFVFMPLMGCAVATGLIFASLIKGISYAPDLEEVLFNYTTLGFAFVESFAFLLFFVAGLVLIF*
Ga0075170_1022933	Ga0075170_10229331	F087278	TNWVRNPKDNERPETEPFKKIDQLLPKKPGQSPEDRAKDIDSALTWVRNRGVDQPLFDSPSSFTPLSNLPIDRRTPEQKARDVENILNWKRNPKENDSPETEPFKKIDQLLPEKPGQTLEDRAKDIDNVLTWMRNGGVDEPKFGPNEPFRPTKNIDMPDKRSPIEKARDIENITNWVRNPKDNDGPETEPFKKIDQLLPKKPGQSPEDRAKDIDSALTWVRNRGVDQPLFDSPSSFTPLSNLPIDRRT
Ga0075170_1027777	Ga0075170_10277771	F087278	FHVLNSIPIDRRTPEQKARDVEDILNWKRNPKEHDSPLTEPFKKIDQLLPEKPGQSPEARANDIDNTLTWLRNRGVDEPKFGPEEPFKTTKNVRMPDNRTPEQKAKDLDDILSWVRNPRDTESPETEPFKKIDQLLPKKDGQSPEDRAKDIDNALTWVRNRGVDQPSFEPTSPFHVLNSIPIDRRTPEQKARDVEDILNWKRNPKEHDS
Ga0075170_1028204	Ga0075170_10282042	F070166	MNIDNYVVQIHKRTKRITLQRFLVSKIAYGKDFSLVELAALFHNQLWLQTKCSTDAQFRERYGNTLEALAKILKDCNFSRGLQPGTIKSVKAKLLAQEWDFLFPQRNMQNMEAQLRNSIFTTWRKPQGVETSKLPPKKHIGKGYRDHGTAPKPELDGSPSWQEVGSEFSNLEREDTENLLFLQKVVSGEIVYEPGTNKEIISRIKRTIQVKEAIKRIDPNWRNTQIAEASGGKVIPKKVG
Ga0075170_1052812	Ga0075170_10528122	F044934	FFAGISSTISFTNLLITRRTLCMPGMRHRRILLPFITISMLFCLRMLALITPVLGAAVIMMALDRH*
Ga0075170_1093841	Ga0075170_10938411	F003081	REEMFNDTRFGAEVFYMHVRGVDTIFVLSYMHILKKIYLKNYVTAESDG*
Ga0075170_1095639	Ga0075170_10956393	F024036	FFFERNIAELDEIRFYGVAPHYFRPLMGLLVISPTHYEGLMMGLFFILLAFLPIVYNYNTFNRQVPTIPMQNSLIQTCAFIIFMLSLFCSASMLPCGRYYYEPEGGYVGNPVKFSYQYIYIYLALIHHLDLIDHYLFQFFQTFVRKCLRLYKKNVVIVKISISQFVNFKNSEKHSARITFTNEIYKNNFFK*
Ga0075170_1103551	Ga0075170_11035513	F024036	FFFERNIAELDEIRFYGVAPHYFRPLMGLLVISPTHYEGLMMGLFFILLAFLPLIYNLYNNSNKHIPTIPMQNSLLQTFAFITFMMSLFCSASMLPCGRYYYEPEGGYVGNPVKFSYQYIYLYLAFIHHLDLIDHYLFQFFQTFIRKCLKLYNKNLEHLKTSNLKFINFNVTKKNYFNLIFNNKVYSVNLRK
Ga0075170_1120006	Ga0075170_11200061	F087278	PEDRAKDIDNALTWVRNRGVDQPLFESPSSFTPLSNLPIDRRTPEQKARDVENILNWKRNPKEHDSPETEPFKKIDQLLPKKPGQTPEDRANDIDNVLTWLRNGGIDEPKFGPNEPFRPTKNIDMPDKRSPTEKARDIENITNWVRNPKDNDRPETEPFKKIDQLLPKKPGQSPEDRAKDIDNALTWVRNRGVDQPLFESPSSFTPLSNLPID
Ga0075170_1193429	Ga0075170_11934291	F089931	MKVLLVVLLLVAVVYAQVRPKPSEVFESEAVLIVKRGNNTYHAQGKWRIDQPEGKGREQFRFDEQHGGHMDFDFLQRYDLGKVYEVTGNPEKCNSTAVTGKMPSVWSFLQLATYQGKTTVNHRTFDLWSYTTGGITLSVAVYPNTPNIPAVFERKTPTEDVALHFINFQTNKPHPVWFTVPRLCNKA*
Ga0075170_1231408	Ga0075170_12314081	F037074	MHAFHIGLFKRMGKSYSGSRVMACVWGFTFFSAAKFFVGFSKKAEEDKKPVEVYNRLVSIFSKNKYGYHTRIMSDFDLLLEAVLNERFIDDSSAYYDDPVLSKEIEDMEMGLNGDFAEADVRHLLKDRDGGHHDSKKCLRYPARFGTNYDKSDDLSPYKILPKG*
Ga0075170_1294498	Ga0075170_12944981	F044934	TPFSSNLKYTGYGAQDLAVLGVIFAGVSTTISFTNLLITRRTLSMPGLRHRKSLIPFLSLALFLTMRMLALITPVLGAAMIMLSMDRH*
Ga0075170_1316185	Ga0075170_13161851	F057990	LNIQDLLAVYDVSMNPEFIEGRKTREQILGDFLNNFEGAKGNRDGTITKEEFFDYYTDLSMSVPSDEYFVRMMESTW*
Ga0075170_1324681	Ga0075170_13246811	F014836	RVFLYLALVAIIFGTVECSCPAVQGYCPQEMIYQGCHCFHEWNDANRVGNWTFPENWLQLYEPAWVSFVSIAGDNTVTVDVERRVNELYVGPNRWDTTRLVIDEDLTIVYDDVPVISAVRGYRLPNGVVRLVIQGKGFGFVSDDIQVTVHEYYEIDGDSNVEDREEFVYDCQHVTLTYRDAKIECNIAPTRPMPYTLTVQVAANGMVTDHQFLSKYIE*
Ga0075170_1341504	Ga0075170_13415041	F037074	MRTPRVHNFHIGIFKRLGKTYSGSRVMACMWGFTVFALIKFSVQFSKAPVEDKKGVESYNRLVSIFSKNKYGYHTRIMSDFDLLLEAVLNERFIDDSSAYYDDPVLQKEIEDMELGLNSDFAEADVKHLLKDKDDGHHGSNRCMRYPGRFGTNYDKTDDLSVYKVLPKGQRPIV*
Ga0075170_1342159	Ga0075170_13421591	F007073	AALDAVGEGFASTPDQVVNPPNWHGTWTAQGRYGGVMYACPVGERVYGVYSNAGFFIGRINGRELEGTWYEGGRGDRNDWQGAFRITLSADNLEFDGYWHRVTQDGTEYRWNEQRLGAPWPSAPSHEQCLVPYDEELTGTHYTVPGYGREPVSFALCRDRWDQIYGSFGSPDGYVEGWSVDNASGFQGYKYDSNGRSGAFILRNISPTEARGFYWRGRLATQNIATAEEVVLHRTSYISNLEDCERVGPGFLERLRGPTNS
Ga0075170_1364555	Ga0075170_13645551	F096705	FIAYLNVLLVALVVTLAVLHVQRTESLKRSREPSRGLDENLNINTGDVNITCTPSRNPYYRDIQCGNGKCVNFDSTGYREEIREAYGQTICACADGYSHYLAPCDYQRKPQLNAWFASFFGGIVGADWFYLYAGVGGNGGYPVAGVFKLLTGGFFSIWCFVDWIRVLAHGFNDSRGMAHYENLTGETQTHHHGTNSQDRHTGVY
Ga0075170_1386495	Ga0075170_13864952	F081750	MGQKINANLFRLGVQKKNWELKYIEKNNEESSFYLYKNLEIQKYLDRFFKLYKIKIHNSKVHYSSDSLQIFVSFYITEKAISIIDKINIKKRTSSYQKNFSVIYRRW
Ga0075170_1390225	Ga0075170_13902251	F003009	KNYIDLNVFNIVKYFTVLSVSYHDSIAILGFIVLLTMASQLVSGVMVSFSLIPDPMLVPMVRDEEDIEDMYTDDFF*
Ga0075170_1412606	Ga0075170_14126061	F100652	NPRVYPAKKTKIHADLTRYITIQVQVTRYSGMRILHNYRNISRASKQFLMGDKVLEQLMILTIKEHFFRPMYYKSPIENSFYIGRTLADLTDRHYGMFANNQHPLQLQVYESYNRFLRTVHSKEDQANTKALSERFQEVVEGRSSLLNEKEGESLSYDDLSDIYIQVMGEHRGKTNMTLATKSK
Ga0075170_1416415	Ga0075170_14164151	F084398	MARLELTLNFPKSFQIKTFNVKSEKKLSPLAKLILQSVQFKHFYYVRDDISYLLKANPVERDFLLQALYSIVISLQNNLSINFFDMWVYEIYINKVSNHNKFIDKK
Ga0075170_1425809	Ga0075170_14258091	F014742	MTLTPSFIPRGCYKEIRKYQLCSSKNGKEACLNDKLSIMEVCPEHVLEGLREKKKWHLRAEVIDNDTYKRAMQVSDYNRGRSVTDLKLKTWEHGKAGYLRSDTYWQDDR
Ga0075170_1439434	Ga0075170_14394341	F085198	QSIDSFPLSSSGWTILCIFGATTVETTVLLADRGETTELTVFVDRVHNPVDFGVTADSFMGRIYKDDFIVFVGGILHNPVGAQHSQVTSTTTNSLLGNRLVRSLEFELVDTSAGGFTVVDTLGQRLLAPTSTNTDTVDHVTLLGLVAQTTGLVRSSGVGYAVNGREVSVFPASKPEQSPQNVRLLLLVKFLKIFV
Ga0075170_1447894	Ga0075170_14478941	F073141	NNISQEEIKLWNDAYSYKGFDRTKVMKDLMRKVPDVKTAQQIIMICGLSGPQRAALTKLINGKTIGSYGIPASGLKGSDGVSCQRITAATADLCAYLLKQANVPKRMNVPLPGWLQFPSAGSIKMPQELRLMHIDFAKRFSTVIGGQFNEQIYDQMAANSYLNDNLNLFNNIEMYLQQSATTTVLPVAAVTFNPARGDVNPPRTV
Ga0075170_1450815	Ga0075170_14508151	F011523	MIGRALAKETDGDFAKFVTSTRKPRDMAQKWRAFKNIARFFKNPFGYVYWKIQPLHQQNRIRLTWALLIFHLYQSFLLWVVVKNQKEKMIENWRYHLGETNRTHGAPHRDRRFPADRKKNYVRYSNFHQVRRNKRLNMVWTNWWCRDQNFRKYFEMRKRHGIRPSLSGFYHEKIYDDVAKKNLEIYQMR*
Ga0075170_1454760	Ga0075170_14547602	F015656	PEYFDFNQFEMSRENMHTIKRPYINFFKTVNFKFQEYNANIKLQCVHWHRLIRACINVHGYFDFLKHIRCMEAVEYFKQCIQLNSFFAYHKKYFP*
Ga0075170_1467157	Ga0075170_14671571	F056539	VARMNCKVAIFLLACLSVVSCQLVLLNPPGRGFVGDNARHAPCGITPTTTGNTVAWEQGTVREIEVQILGAGGGGVIEDRYSCVLQGGESNPIEPLFPIEGALKVQVPDWDFQIYRLHVRLPSFVCRGDTTMQLIYSTENGQEYFQCQDIILTYSSSSTLVASLVASIIFVVLVV
Ga0075170_1470245	Ga0075170_14702451	F073141	LKIKSIHYLNMSSIDNKNNEDELLRNYVTELYNLNNISQEEIKLWNDAYSYKGFDRTKVMKDLMRKVPDVKTAQQIIMICGLSGPQRAALTKLINGKTIGSYGIPASGLKGSDGVSCQRITAATADLCAYLLKQANVPKRMNISLPGWLQFPSAGSIKMPQELRLMHIDFAKRFSTVIGGQFNEQIYDQMAANAYLNDNLNLFSNIDVYLQQSAITTVLPVPSITFNPARGDVNLPKTVDSSKVKPLGR*
Ga0075170_1477256	Ga0075170_14772561	F044934	LVSVVFAGISSTVSFTNLLITRRTLSMPGMRHRRILLPFITISILFCLRMLAIITPVLGAAMIMMVLDRH*
Ga0075170_1486247	Ga0075170_14862471	F040484	LTHPTTDMALAFKRAVSEAQTAVDAANKSIQGWYKPPMDPALVFDFEAMKAIEGVSKQNPNSVEGPKNITCVNWVKENCSNFHSVWGDVQYKDKKYALPIINKHLDKVVVHVDDKGVAGKYNSYNVEWKGKELHITVHLDFTNYPQRLNLTDEKAGAGHVDWQVWDHLDEVGNITYEIRKSTMIDYEHSPLNKYKKDLAAKVKKDIPLDVDWDSVFALTGKSCEYANKPDVPNRARGVNLLGDDGKALYNTYYAIETLVKDAMGMEAFLETFDKVLVVIQPGVHADFSGDNVLVTKEGKTLKFAFKFATINLANARFDYSKMAKMIEAML*
Ga0075170_1487184	Ga0075170_14871841	F003009	GPYYSFSIKSIFQYFAILSVSFHDIHSLFGFFTFLVVVSQLVSGTMLSFSLVPEPMIVPIVREEEDTEDLYIDDFF*
Ga0075170_1498276	Ga0075170_14982762	F057919	LSVSFHDIHSLFGFFTFLVVASQLVSGTMLSFSLVPEPMIVPIVREEEDTEDLYIDDFF*
Ga0075170_1500600	Ga0075170_15006001	F073141	NNISQEEIKLWNDAYSYKGFDRTKVMKDLMRKVPDVKTAQQIIMICGLSGPQRAALTKLINGKTIGSYGIPASGLKGSDGVSCQRITAATADLCAYLLKQANVPKRMNIPLPGWLQFPSAGSIKMPQELRLMHVDFAKRFSTVIGGQFNEQIYDQMAANAYLNDNLNLFNNIDAYMQQSGMATSLPMPAVTFNPARGDVNPPKTIDSSKVKPTGR*
Ga0075170_1503498	Ga0075170_15034981	F042753	SMSEFDHENIEKERLAHEQERLTKHVVSPSARPEFEKNDNLTARSQAVEDAKLRAVMEKKASLPRFDPANKDAPGAFKILDAFEVQTLVTLRNNEFAQAFNSGNIAGLHDFFTRTGGIVGVGGKEFSGKADTTAYFQRLRDSGVKNLKHTPGNYKAESDRDIQEWASKYEHSGASGTYSIHWRRVGNAWLIGKLTYHS*
Ga0075170_1504048	Ga0075170_15040481	F061006	VENILNWKRNPKEHDGPETEPFKKIDQLLPDKPGQTPKDRANDIDNVLTWLRNGGIDEPKFGPNEPFRPTKSIDMPDKRSPTEKARDVENITNWVRNPKDNDRPETEPFKKIDQLLPKKPGQTPEDRAKDIDSALTWVRNRGVDQPLDESLSPFKPLNSLPIDHRTPEQKARDVENILNWKRNPKEHDG
Ga0075170_1510339	Ga0075170_15103391	F085199	NARRTSQCLKSLEVTSTGLGLELARLGLKNSLASDASVSMRRSRVGLEFARLGLQNSALANTSISSRGGSLALELARLYSPVVSEGRDLGLGLLVTLVGGGEARAYLGGGQSLLGQEGIGDLGVLLLGSAVGAPDLTRVFLEGLQVEDDVATVALEAELVIGIITSLEGFQRISDLSAL
Ga0075170_1517214	Ga0075170_15172141	F102609	LLTSDITYNALARLSISVGGAAANSDVYDYSAIYGGFALLKVVPALAFSPIPAIYTDGEATGLFVAVKSKDGAIGGTWPYADDAQFSLHIVPTSLTAGVVIEPSTLEFSKSQLSDPVQSFSIKHTNPRVFTTKRQYALQWLLRYAGTPTSSAVDITSIVSQDAQNVLLSRYQIIPKFPHVLSYNWQKASFNLSHIPVAHVSFTPRIPPVDGDSDVRGATTPAGRVDFEPPVLVAAPGQQIIEFKVKAQPGIDRDNLYYRVDWEVHGHADDLVNWVEWLQDGATGFNNGDQITFATWHLAPASATTVSVALIMIVCVL
Ga0075170_1531744	Ga0075170_15317441	F003009	KSIFQYFAILSVSFHDIHSLFGFFTFLVVASQLVSGTMLAFSLVPEPMIVPIVREEEDTEDLYIDDFF*
Ga0075170_1532884	Ga0075170_15328841	F057919	AILSVSFHDIHSLFGFFTFLVVASQLVSGTMLSFSLVPEPMIVPIVREEEDTEDLYIDDFF*
Ga0075170_1536901	Ga0075170_15369011	F012917	KFLRFPLNDCGYYDKYSSFEEINQVWDRKKHLRRKRWSQE*
Ga0075170_1540366	Ga0075170_15403661	F093912	NFQKKQKIKQPKAIITILKALLLKFKTYKFKPVALHFNNLFFKQQSYILKRLKQKVFIKLIMSYNYYPHNGCRLKKKKRIKIRTRTKKL*
Ga0075170_1544988	Ga0075170_15449881	F087278	PEQKARDVDDILNWKRNPRENESPSTEPFKRIDQLLPEKPGQSPKDRANDIDNALQWMRNRGVDEPMFKDEPFTKAKQMPMPDSRTPEQKAKDIDDILQWKRNPRENESPSTEPFKRIDQLLPEKPGQSPEERAKDIDNALTWMRNRGVDQPEFGPTPTFDKLNSLPIDRRTPEQKARDVDDILNWKRNPRENE
Ga0075170_1546461	Ga0075170_15464611	F070166	MNLNDYVVQIRKGTKRITLQRFLVSKIAYGRDFSLTELAALFHNQLWLQAKCQTDLHFKEKFGKSLEELAKILKECNFSRGLQPSAIKSVRTKVLAQEWDFLIPQRNLPNLEVQMRNSVYTKWRKPQGVEISKLPPKKHIGRGYRDHGTAPKPELDGSPSWQEVGSEFSNLEREDTENLLYLLKVVSGEENVTKETISRLRRTIQVNEAIKRIDPNWRNTQIAEASEGRLIPKKVK*
Ga0075170_1547660	Ga0075170_15476601	F001904	LALSAVAVSAQTDFEIAALEVAGDCHPECRWQCDDPVCPAQCHPVCERPKCQIHCEETECAKCKIHCDKPQCNVRCPKDLCEKNDCPKCETVCAPANCRTQCEAPNAVCTPMCEATKCDWKCKKPVTCPKPKCELVCERPKCAAKKRAAGPSFIETASTDKAENPTCCPCSVQANVAAAMQQASKNSEVDEEMMPSFMEVVHSMKFKEAASAESQCCPCAA*
Ga0075170_1549823	Ga0075170_15498231	F085200	KQAEDEKPQGAEGARFGNGKQGFKKRHNNKHKSQEPNTAGEFFKGFGVSIGPHRPEMYQKTVQKVGLYTSMQFKNGSDITICLLEEKLVKPEVPVLEEEHTAHEKRLWEYRMNELMKTEKLLEGNLRSLFMVLMSLCDSTTKNKIENTSEYPKLMKRLNSLGLLSVIKKLVYTGSTSDFDVRHNKATALLNLMNLQQERFQ
Ga0075170_1550288	Ga0075170_15502881	F030134	KDKIQPVLQRFKLRSCNFLIVEQTNPARLCNQPDKIIQHRGSNCAYR*
Ga0075170_1557055	Ga0075170_15570551	F102610	MLCLLLKCFFSRPFLNNIGIVESVGDGIVNILGLQNVANGEMVEICISTNLQGVNTQKALVLNLGPK*
Ga0075170_1565221	Ga0075170_15652212	F091427	MLILGVYYAGISTTISIVNLLITRRTLSMPGLRNRRILIPFITITILLMLRALSVITPVLGSAMLMLLTDRH*
Ga0075170_1565720	Ga0075170_15657201	F030134	KDKIQPVLQRFKLRSCNFLIVEQTNLASFYNQPGKIIQHRGSNHTFR*
Ga0075170_1567750	Ga0075170_15677503	F001488	MARLELTLNFPKHFHIKTFNVKSEPMLSPLAKSILQSVQFKHFYYVRDDIDYRLRSHPMERDFLLQALFSIAISLQNNLSINFFDMWIYEIYISKVSNPNKFLKKSSQNKELDEYITIKLAYGINTSQEKKNNILIFIFINFKSIQKILRKL*

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300007241: Wastewater effluent complex algal communities from Wisconsin, to seasonally profile nutrient transformation and Carbon sequestration - JI 7/17/14 B RNA (Eukaryote Community Metatranscriptome)

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences