NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Sample 3300007595

3300007595: Active sludge microbial communities from Klosterneuburg, Austria - Klosterneuburg WWTP active sludge MT KNB_T0_6L (Metagenome Metatranscriptome)



Overview

Basic Information
IMG/M Taxon OID3300007595 Open in IMG/M
GOLD Reference
(Study | Sequencing Project | Analysis Project)		Gs0103597 | Gp0123892 | Ga0099784
Sample NameActive sludge microbial communities from Klosterneuburg, Austria - Klosterneuburg WWTP active sludge MT KNB_T0_6L (Metagenome Metatranscriptome)
Sequencing StatusPermanent Draft
Sequencing CenterDOE Joint Genome Institute (JGI)
Published?N
Use PolicyOpen

Dataset Contents
Total Genome Size61053372
Sequencing Scaffolds6
Novel Protein Genes7
Associated Families5

Dataset Phylogeny
Taxonomy GroupsNumber of Scaffolds
Not Available4
All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Leviviricetes → Norzivirales → Atkinsviridae → Helacdivirus → Helacdivirus borborovicinum1
All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
NameActive Sludge And Wastewater Microbial Communities From Klosterneuburg, Austria
TypeEngineered
TaxonomyEngineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge → Active Sludge And Wastewater Microbial Communities From Klosterneuburg, Austria

Alternative Ecosystem Assignments
Environment Ontology (ENVO)Unclassified
Earth Microbiome Project Ontology (EMPO)Free-living → Non-saline → Water (non-saline)

Location Information
LocationAustria: Klosterneuburg
CoordinatesLat. (o)48.3Long. (o)16.2Alt. (m)N/ADepth (m)N/A
Location on Map
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Associated Families

FamilyCategoryNumber of Sequences3D Structure?
F014988Metagenome / Metatranscriptome258Y
F051952Metatranscriptome143N
F052619Metagenome / Metatranscriptome142Y
F070166Metatranscriptome123N
F105419Metagenome / Metatranscriptome100Y

Associated Scaffolds

ScaffoldTaxonomyLengthIMG/M Link
Ga0099784_1000988Not Available752Open in IMG/M
Ga0099784_1003221All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Leviviricetes → Norzivirales → Atkinsviridae → Helacdivirus → Helacdivirus borborovicinum1315Open in IMG/M
Ga0099784_1010537Not Available1902Open in IMG/M
Ga0099784_1038289Not Available799Open in IMG/M
Ga0099784_1158306Not Available1040Open in IMG/M
Ga0099784_1200517All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium807Open in IMG/M

Sequences

Scaffold IDProtein IDFamilySequence
Ga0099784_1000988Ga0099784_10009881F070166IHRRTKRITLQRFLVSKIAYGKDFSLIELAALFHNQLWLQQKSQTDVHFREKFGKSLEELASVLKECNFSRGLSPGTTDRMRNRVLALEWDFLIPQRNLPNLEAQLRNSITTKWRKQEGVEINKLPPKSFIGKGYRDHGTAPSPEKDGSPSWQEVGSEFSNLEREDTENLLFLLKIIEGTSNVSIKEQIAGIKRTIEVSRAIARIDPNWRNTQIAEASEGKIRPRK*
Ga0099784_1003221Ga0099784_10032211F014988MSFNPASPIIGAAVPGFINPTYTIVVDTAPNINGKQYAVTVMGGTQVGVDANSVSKPFTLTFFRPAVLRVLPAVNPVTGVVKNIPVNSYKLITRKGAVPAVNQSIQVARITTVIEVPAGTDTYEPEDIKAMISAHFGAGYANASGIADTVITGVL*
Ga0099784_1010537Ga0099784_10105371F070166MNLDNYIVQIHRRTKRITLQRFLVSKIAYGKDFSLTELAALFHNQLWLQVKCETDVHFKEKFGGTLEALAKILKECNFSRGLQPGTISRMKAKVLALEGDFLIPQRNLPNLEAQLRNSITTKWRKQEGIEISKLPPKSFIGKGYRDHGTAPSPEIDGSPSWQEVGSEFSNLEREHTEAFLFLLKVIDNDPNVSIQERLQGLKRAIEVTERIKRIHPNWRNSQITEASKGRIIDAKKVKKVIP*
Ga0099784_1010537Ga0099784_10105372F070166VSKIAYGKDFSLIELAALFHNQLWLQVKCETDVHFKEKFGVSLEEIAKILKECNFSRGLQPGTISRMKAKVLALEGDFLIPQRNLPNLEAQLRNSITTKWRKQEGVEINKLPPKSFIGKGYRDHGTAPSPEKDGSPSWQEVGSEFSNLEREHTENLLFLLKVIDNEPNISNQEKLQGLRRSLEIKARIERIDPNWRNSQITEASKGRIVDAKVAKKVIP*
Ga0099784_1038289Ga0099784_10382891F051952MPEFPRQTIAPDHFTTTALSENSWRILGKVTENEVTLVRYFLSKIVYTDEVVTLEETCILFLSFEKMVQKMSQHEAYRAKYGSEVFTFRAVFTSLEDVVSANPQDRLIRMREVYGFYRGKLFSRRYYFSVRGQLTRELRLKVLTRFPKKFKPKAFVGKGYGDHGTAKDMAYDGSPSWQEVAMADTNLGTSDTSKTDYLEFLFRNFNTNRVQLFPQKKPGEKLHSSSN*
Ga0099784_1158306Ga0099784_11583061F052619MNTPVYRPVHKFSRTVEGAYDIICDGITPSLSGLIFQLSSLPSFTDFTNLFDMYRITKIEIDWVPEYTELTDAALVSNAVNVRFNSVVDISDAAAPLAVNDLLQYETVKSTSITKGHSRSWKPCFLMNALVPCSCWLPTSAPNERHYAIKVAVPPTGVVMTFRS*
Ga0099784_1200517Ga0099784_12005171F105419MRKLFALGALMVAAAVSNGCISNTMYGCEITETLAPGASEGEVVMKHGAPDNIVYLGNQYCNPQTGERGEVDKYLYEYRIGGGTTLLGWLFASDEFHNIAYLIEGGRVMGGGYVGEGKGSIILGNNFGVISTPLGVFDMNFGGFVHPKARVGY
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