NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Sample 3300007598

3300007598: Active sludge microbial communities from Klosterneuburg, Austria - Klosterneuburg WWTP active sludge MT KNB_B6R_H (Metagenome Metatranscriptome)



Overview

Basic Information
IMG/M Taxon OID3300007598 Open in IMG/M
GOLD Reference
(Study | Sequencing Project | Analysis Project)		Gs0103597 | Gp0123875 | Ga0099786
Sample NameActive sludge microbial communities from Klosterneuburg, Austria - Klosterneuburg WWTP active sludge MT KNB_B6R_H (Metagenome Metatranscriptome)
Sequencing StatusPermanent Draft
Sequencing CenterDOE Joint Genome Institute (JGI)
Published?N
Use PolicyOpen

Dataset Contents
Total Genome Size66913149
Sequencing Scaffolds8
Novel Protein Genes8
Associated Families6

Dataset Phylogeny
Taxonomy GroupsNumber of Scaffolds
Not Available8

Ecosystem and Geography

Ecosystem Assignment (GOLD)
NameActive Sludge And Wastewater Microbial Communities From Klosterneuburg, Austria
TypeEngineered
TaxonomyEngineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge → Active Sludge And Wastewater Microbial Communities From Klosterneuburg, Austria

Alternative Ecosystem Assignments
Environment Ontology (ENVO)Unclassified
Earth Microbiome Project Ontology (EMPO)Free-living → Non-saline → Water (non-saline)

Location Information
LocationAustria: Klosterneuburg
CoordinatesLat. (o)48.3Long. (o)16.2Alt. (m)N/ADepth (m)N/A
Location on Map
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Associated Families

FamilyCategoryNumber of Sequences3D Structure?
F009934Metagenome / Metatranscriptome311Y
F014854Metagenome / Metatranscriptome259Y
F017318Metagenome / Metatranscriptome241Y
F045132Metagenome / Metatranscriptome153Y
F051952Metatranscriptome143N
F070166Metatranscriptome123N

Associated Scaffolds

ScaffoldTaxonomyLengthIMG/M Link
Ga0099786_1016900Not Available1229Open in IMG/M
Ga0099786_1047617Not Available743Open in IMG/M
Ga0099786_1063839Not Available1071Open in IMG/M
Ga0099786_1196924Not Available733Open in IMG/M
Ga0099786_1200804Not Available716Open in IMG/M
Ga0099786_1205236Not Available679Open in IMG/M
Ga0099786_1210155Not Available747Open in IMG/M
Ga0099786_1218682Not Available811Open in IMG/M

Sequences

Scaffold IDProtein IDFamilySequence
Ga0099786_1016900Ga0099786_10169002F070166MNLDNYVVQIHRRTKRITLQRFLISKIAYGEDFSLIELAALFHNQLWLQTKCQVDPHFKVKFGMTLEVIASFLKECNFSRGLQPATISRMKAKALTLEGDFLIPKRNLPNLEAQLRNSISTRWRKPEGVEVSKLPPKQHVGKGYRDHGTAQKPEIDGSPSWQEVGSEFGNLERESTELILKLLKIIEGTSNDSITEQVKQIQRTVAVHEAIKRIHPNWRNTEIAEASEGKIGMKFKAEK*
Ga0099786_1047617Ga0099786_10476171F051952KVTENEVTLVRYFLSKIVYTDEVVTLEETCILFLSFEKMVQKMSQHEAYRAKYGTEVFTFRAVFTSLEDVVSANPQDRLTRMREVYGFYRGKLFSRRYYFSVRGQLTRELRLKVLTRFPKKFKPKAFVGKGYGDHGTAKEMAYDGSPSWQEVAMADTNLGTSDTSRFDYLEFLFRNFNTSRVQLFPQKKPGEKLHSSSN*
Ga0099786_1063839Ga0099786_10638391F051952TENEVTLVRYFLSKIVYTDEVVTLEETCILFLSFEKMVQKMSQHEAYRAKYGSEVFTFRAVFTSLEDVVSANPQDRLIRMREVYGFYRGKLFSRRYYFSVRGQLTRELRLKVLTRFPKKFKPKAFVGKGYGDHGTAKDMAYDGSPSWQEVAMADTNLGTSDTSKTDYLEFLFRNFNTNRVQLFPQKKPGEKLHSSSN*
Ga0099786_1196924Ga0099786_11969242F017318LFDISCDGINPSVGLFNFSLSDLPNNSDFTNLFDMYRIDKIEVAWYPEYTVLSDSGLVSNAVDVQVNTAIAQISNTPTVVSDVLQYKTCVGTGITQIHKRSFQPSYLMDGICPCSCFLSCNNATANWYGVAYGVAPTGTAMLFKSRAKFFMSFVQSR*
Ga0099786_1200804Ga0099786_12008041F014854QSRAAVIARKLSSNSRIIPGDWGMVGLGWLARPLSNWSASSGSGGRIHQFLWHVRACQLRETRNLAIRNDQKPFRVGSSSSGRFRAWVNRSYPEGNRLLLCISTGCTTLADSIKPFETAQ
Ga0099786_1205236Ga0099786_12052361F009934MREPLDGPAMRPETPLAVENGVGKLAAYTAPNVSMGKRAW
Ga0099786_1210155Ga0099786_12101551F070166MNLDNYIVQIHRRTKRITLQRFLVSKIAYGKDFSLTELAALFHNQLWLQVKCETDVHFKEKFGGTLEALAKILKECNFSRGLQPGTISRMKAKVLALEGDFLIPQRNLPNLEAQLRNSITTKWRKQEGIEISKLPPKSFIGKGYRDHGTAPSPEIDGSPSWQEVGSEFSNLEREHTEAFLFLLKVIDNDPNVSIQERLQGLKRAIEVAERILEREHTEAFLFLLKVIDNDPNVS
Ga0099786_1218682Ga0099786_12186821F045132VLMHSSNHYPLGNCDSPKPETSLDYLTRLGAVSHHSSSPSSLFAYTDSVRTLPEELVNPASAAKYISTRLQRGLVNQPDLAFPRSPGRILETAADQLLSTDRPSQ
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