Sample 3300007741

Overview

Basic Information
IMG/M Taxon OID	3300007741 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0117787 \| Gp0124805 \| Ga0105551
Sample Name	Marine sponge C. singaporensis microbiome, Papua New Guinea CO2 seep, Dobu 'bubble', co12ds 200bp-25jan2016
Sequencing Status	Finished
Sequencing Center	University of New South Wales
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	54745815
Sequencing Scaffolds	17
Novel Protein Genes	17
Associated Families	7

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Eukaryota	10
Not Available	4
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	2
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → Methylobacterium oryzae	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Seawater And Marine Sponges Microbial Communities From Papua New Guinea Co2 Seeps
Type	Host-Associated
Taxonomy	Host-Associated → Porifera → Unclassified → Unclassified → Unclassified → Coelcarteria Singaporensis (Marine Sponge) → Seawater And Marine Sponges Microbial Communities From Papua New Guinea Co2 Seeps

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	Unclassified
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline)

Location Information
Location	Dobu 'bubble' site, Papua New Guinea
Coordinates	Lat. (^o)	-9.73665	Long. (^o)	150.867667	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Family	Category	Number of Sequences	3D Structure?
F015987	Metagenome / Metatranscriptome	250	Y
F034580	Metagenome / Metatranscriptome	174	N
F053330	Metagenome	141	Y
F059062	Metagenome	134	Y
F080158	Metagenome / Metatranscriptome	115	Y
F085224	Metagenome	111	N
F101313	Metagenome / Metatranscriptome	102	N

Family

Category

Number of Sequences

3D Structure?

F015987

Metagenome / Metatranscriptome

250

F034580

Metagenome / Metatranscriptome

174

F053330

Metagenome

141

F059062

Metagenome

134

F080158

Metagenome / Metatranscriptome

115

F085224

Metagenome

111

F101313

Metagenome / Metatranscriptome

102

Scaffold	Taxonomy	Length	IMG/M Link
Ga0105551_107798	All Organisms → cellular organisms → Eukaryota	990	Open in IMG/M
Ga0105551_110593	Not Available	835	Open in IMG/M
Ga0105551_111509	Not Available	799	Open in IMG/M
Ga0105551_116373	All Organisms → cellular organisms → Eukaryota	667	Open in IMG/M
Ga0105551_116375	Not Available	667	Open in IMG/M
Ga0105551_119190	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	616	Open in IMG/M
Ga0105551_120196	Not Available	601	Open in IMG/M
Ga0105551_120823	All Organisms → cellular organisms → Eukaryota	591	Open in IMG/M
Ga0105551_122802	All Organisms → cellular organisms → Eukaryota	563	Open in IMG/M
Ga0105551_123117	All Organisms → cellular organisms → Eukaryota	559	Open in IMG/M
Ga0105551_124312	All Organisms → cellular organisms → Eukaryota	543	Open in IMG/M
Ga0105551_124627	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	540	Open in IMG/M
Ga0105551_125645	All Organisms → cellular organisms → Eukaryota	528	Open in IMG/M
Ga0105551_126019	All Organisms → cellular organisms → Eukaryota	523	Open in IMG/M
Ga0105551_126366	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → Methylobacterium oryzae	520	Open in IMG/M
Ga0105551_128235	All Organisms → cellular organisms → Eukaryota	501	Open in IMG/M
Ga0105551_128239	All Organisms → cellular organisms → Eukaryota	501	Open in IMG/M

Scaffold

Taxonomy

Length

IMG/M Link

Ga0105551_107798

All Organisms → cellular organisms → Eukaryota

990

Open in IMG/M

Ga0105551_110593

Not Available

835

Open in IMG/M

Ga0105551_111509

Not Available

799

Open in IMG/M

Ga0105551_116373

All Organisms → cellular organisms → Eukaryota

667

Open in IMG/M

Ga0105551_116375

Not Available

667

Open in IMG/M

Ga0105551_119190

All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium

616

Open in IMG/M

Ga0105551_120196

Not Available

601

Open in IMG/M

Ga0105551_120823

All Organisms → cellular organisms → Eukaryota

591

Open in IMG/M

Ga0105551_122802

All Organisms → cellular organisms → Eukaryota

563

Open in IMG/M

Ga0105551_123117

All Organisms → cellular organisms → Eukaryota

559

Open in IMG/M

Ga0105551_124312

All Organisms → cellular organisms → Eukaryota

543

Open in IMG/M

Ga0105551_124627

All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium

540

Open in IMG/M

Ga0105551_125645

All Organisms → cellular organisms → Eukaryota

528

Open in IMG/M

Ga0105551_126019

All Organisms → cellular organisms → Eukaryota

523

Open in IMG/M

Ga0105551_126366

All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → Methylobacterium oryzae

520

Open in IMG/M

Ga0105551_128235

All Organisms → cellular organisms → Eukaryota

501

Open in IMG/M

Ga0105551_128239

All Organisms → cellular organisms → Eukaryota

501

Open in IMG/M

Scaffold ID	Protein ID	Family	Sequence
Ga0105551_107798	Ga0105551_1077981	F085224	FSYQDLLRFKAIVMFPYSIWSGVMLELLEMGVPVFYPSKILLKRWHERYEMVYQRSSGGHRSAGGFSNIAYGADSAPDPNDSVNREALHYWLEKAEFYNWDVRYFDSPADLHEQLKQADFEALHRDVLKTRARMDKIRDARWAEIKRDLTKTG*
Ga0105551_110593	Ga0105551_1105931	F015987	VEQITQTKLEKLNVLQLYQHYGALERSFPLLTPESQDLARAELEACSKLRSEKVDRIYYALAHHEDSAERAKKENVKLQEAQKHHESQVRQLKELVKNLRRSLPLDTNKINGRN
Ga0105551_111509	Ga0105551_1115092	F101313	MGSALKREFKVGDAVCHTNKFSTGNNFRKRRQGVVLALEKRPVKGGKLRSYVKVLWNTSSGPCYHASHALLLLKERKDAIEEASKLIST*
Ga0105551_116373	Ga0105551_1163732	F085224	YRRLITRTLNGFSYQDLLRFKAIVMFPYSIWSGVMLELLEMGVPMFYPSKSLLRRWDEKYGIMFHRPDFGRPRSAGGFSNIAYGKGAMPDPNDGVNREALHYWLEKAEFYNWDVRYFDSPADLHEQLKQADFEAMHRDVLKTRARMDKIRDERWAEIKRDLTKTSSTPA*
Ga0105551_116375	Ga0105551_1163751	F059062	LEGAIMSREVFDDNTILEGFKNLRDIIDAQKELNHLFDKRLKLLEASQFRQKPLVLTKEMEVKN*
Ga0105551_119190	Ga0105551_1191902	F053330	MAGTSIYSVYRRTARAAAKQQVVKKTSSVDVDKARSDFAYFCDVV
Ga0105551_120196	Ga0105551_1201961	F034580	MFALKNKELTASGQVTTKVSAGTNTLSAPARVLQLSIRCGATLGKVDLIDDGPSGTVRYTVPTPAIGAGEDEVMTISFPDFGIRFQTDLYVFF
Ga0105551_120823	Ga0105551_1208231	F085224	ELIEMGVPMFYPSKRLLKRWDERYGMMFHRTNAFGERRAGGFSNVAYGKGSMPDPNDSVNREALHYWLEKAEFYNWDVRYFDSPADLHEQLKAADFEALHRDVLKTRARMDKIRNERWAEIKRDLTKTA*
Ga0105551_122802	Ga0105551_1228022	F085224	HRTHEFGSGRNAGGFSNIAYGADSAPDPNDSVNPDALHYWLDKSEFYNWDVRYFDSPADLHEQLKAADFEAMHRDVLKTRARMDKIRDERWAEIKRDLTKTSSTPA*
Ga0105551_123117	Ga0105551_1231171	F085224	ELIEMGVPMFYPSKRLLKRWDERYGMMFHRTNAFGERRAGGFSNVAYGKGSMPDPNDSVNREALHYWLEKAEFYNWDVRYFDSPADLHEQLKQADFEAMHRDVLKTRARMDKIRDERWAEIKRDLTKTSSTPA*
Ga0105551_124312	Ga0105551_1243122	F085224	HRTHEFGSGRNAGGFSNIAYGADSAPDPNDSVNPEALHYWLDKSEFYNWDVRYFDSPADLHEQLKQADFEAMHRDVLKTRARMDKIRNERWAEIRRDLTKSNSTPA*
Ga0105551_124627	Ga0105551_1246272	F080158	MATYKSDAGAILQPGNQINGLSSFNHEGVFGWPGIEAFEQIGYVKVTNVAADKASFKSFNITVPSPDRRVSDRVRDDRTSLVVKASTDRPAYVYGASIAIAQDTPSGGL
Ga0105551_125645	Ga0105551_1256451	F085224	RFKAIVMFPYSVFSGMMLELLEMGVPMFYPSKILLKRWDEQYGIMTQRTSAEGKRNAGGFSNVAYGKDLMPDPNDSVNPEALHYWLEKAEWYNWDVRYFDSPADLHEQLKAADFEAMHRDVLKTRARMDKIRDERWAEIRRDLTKTNSSGV*
Ga0105551_126019	Ga0105551_1260192	F085224	PYSAFSGIMLELLEMGVPMFYPSKSLLKRWDESYGMMFQRTSGYGRRSAGGFSNIAYGKDLMPDPNDSVNREALHYWLEKSEWYNWDVRYFDSPADLHEKLKAADFEAMHRDVLKTRARTDKIRDERWAEIKRDLTKTA*
Ga0105551_126366	Ga0105551_1263661	F085224	LRFKAIVMFPYSAFSGIMLELLEMGVPMFYPSKRLLKRWDESYGMMFQRTSGYGRRSAGGFSNVAYGKDLMPDPNDSVNREALHYWLDKSEFYNWDVRYFDSPADLHEQLKAADFEAMHRDVLKTRARMDKIRDERWAEIRRDLTKTSSTPA*
Ga0105551_128235	Ga0105551_1282351	F085224	VMFPYSIWSGVMLELLEMGVPMFYPSKILLKRWHERYEMVYQRSSGGRRSAGGFSNIAYGKDSAPDPNDSVNREALHYWLDKAEFYNWDVRYFDSPADLHEQLKAADFEAMHRDVLKTRARMDKIRDERWAEIKRDLTKISSTPA*
Ga0105551_128239	Ga0105551_1282391	F085224	VMFPYSIWSGVMLELLEMGVPMFYPSKILLKRWDESYGMMFQLTSGGCRSAGGFSNIAYGADSAPDPNDGVNREASHYWLDKAEFYNWDVRYFDSPADLHEQLKQADFEAMHRDVLKTRARMDKIRDERWAEIRRDLTKISSTPA*

Scaffold ID

Protein ID

Family

Sequence

Ga0105551_107798

Ga0105551_1077981

F085224

FSYQDLLRFKAIVMFPYSIWSGVMLELLEMGVPVFYPSKILLKRWHERYEMVYQRSSGGHRSAGGFSNIAYGADSAPDPNDSVNREALHYWLEKAEFYNWDVRYFDSPADLHEQLKQADFEALHRDVLKTRARMDKIRDARWAEIKRDLTKTG*

Ga0105551_110593

Ga0105551_1105931

F015987

VEQITQTKLEKLNVLQLYQHYGALERSFPLLTPESQDLARAELEACSKLRSEKVDRIYYALAHHEDSAERAKKENVKLQEAQKHHESQVRQLKELVKNLRRSLPLDTNKINGRN

Ga0105551_111509

Ga0105551_1115092

F101313

MGSALKREFKVGDAVCHTNKFSTGNNFRKRRQGVVLALEKRPVKGGKLRSYVKVLWNTSSGPCYHASHALLLLKERKDAIEEASKLIST*

Ga0105551_116373

Ga0105551_1163732

F085224

YRRLITRTLNGFSYQDLLRFKAIVMFPYSIWSGVMLELLEMGVPMFYPSKSLLRRWDEKYGIMFHRPDFGRPRSAGGFSNIAYGKGAMPDPNDGVNREALHYWLEKAEFYNWDVRYFDSPADLHEQLKQADFEAMHRDVLKTRARMDKIRDERWAEIKRDLTKTSSTPA*

Ga0105551_116375

Ga0105551_1163751

F059062

LEGAIMSREVFDDNTILEGFKNLRDIIDAQKELNHLFDKRLKLLEASQFRQKPLVLTKEMEVKN*

Ga0105551_119190

Ga0105551_1191902

F053330

MAGTSIYSVYRRTARAAAKQQVVKKTSSVDVDKARSDFAYFCDVV

Ga0105551_120196

Ga0105551_1201961

F034580

MFALKNKELTASGQVTTKVSAGTNTLSAPARVLQLSIRCGATLGKVDLIDDGPSGTVRYTVPTPAIGAGEDEVMTISFPDFGIRFQTDLYVFF

Ga0105551_120823

Ga0105551_1208231

F085224

ELIEMGVPMFYPSKRLLKRWDERYGMMFHRTNAFGERRAGGFSNVAYGKGSMPDPNDSVNREALHYWLEKAEFYNWDVRYFDSPADLHEQLKAADFEALHRDVLKTRARMDKIRNERWAEIKRDLTKTA*

Ga0105551_122802

Ga0105551_1228022

F085224

HRTHEFGSGRNAGGFSNIAYGADSAPDPNDSVNPDALHYWLDKSEFYNWDVRYFDSPADLHEQLKAADFEAMHRDVLKTRARMDKIRDERWAEIKRDLTKTSSTPA*

Ga0105551_123117

Ga0105551_1231171

F085224

ELIEMGVPMFYPSKRLLKRWDERYGMMFHRTNAFGERRAGGFSNVAYGKGSMPDPNDSVNREALHYWLEKAEFYNWDVRYFDSPADLHEQLKQADFEAMHRDVLKTRARMDKIRDERWAEIKRDLTKTSSTPA*

Ga0105551_124312

Ga0105551_1243122

F085224

HRTHEFGSGRNAGGFSNIAYGADSAPDPNDSVNPEALHYWLDKSEFYNWDVRYFDSPADLHEQLKQADFEAMHRDVLKTRARMDKIRNERWAEIRRDLTKSNSTPA*

Ga0105551_124627

Ga0105551_1246272

F080158

MATYKSDAGAILQPGNQINGLSSFNHEGVFGWPGIEAFEQIGYVKVTNVAADKASFKSFNITVPSPDRRVSDRVRDDRTSLVVKASTDRPAYVYGASIAIAQDTPSGGL

Ga0105551_125645

Ga0105551_1256451

F085224

RFKAIVMFPYSVFSGMMLELLEMGVPMFYPSKILLKRWDEQYGIMTQRTSAEGKRNAGGFSNVAYGKDLMPDPNDSVNPEALHYWLEKAEWYNWDVRYFDSPADLHEQLKAADFEAMHRDVLKTRARMDKIRDERWAEIRRDLTKTNSSGV*

Ga0105551_126019

Ga0105551_1260192

F085224

PYSAFSGIMLELLEMGVPMFYPSKSLLKRWDESYGMMFQRTSGYGRRSAGGFSNIAYGKDLMPDPNDSVNREALHYWLEKSEWYNWDVRYFDSPADLHEKLKAADFEAMHRDVLKTRARTDKIRDERWAEIKRDLTKTA*

Ga0105551_126366

Ga0105551_1263661

F085224

LRFKAIVMFPYSAFSGIMLELLEMGVPMFYPSKRLLKRWDESYGMMFQRTSGYGRRSAGGFSNVAYGKDLMPDPNDSVNREALHYWLDKSEFYNWDVRYFDSPADLHEQLKAADFEAMHRDVLKTRARMDKIRDERWAEIRRDLTKTSSTPA*

Ga0105551_128235

Ga0105551_1282351

F085224

VMFPYSIWSGVMLELLEMGVPMFYPSKILLKRWHERYEMVYQRSSGGRRSAGGFSNIAYGKDSAPDPNDSVNREALHYWLDKAEFYNWDVRYFDSPADLHEQLKAADFEAMHRDVLKTRARMDKIRDERWAEIKRDLTKISSTPA*

Ga0105551_128239

Ga0105551_1282391

F085224

VMFPYSIWSGVMLELLEMGVPMFYPSKILLKRWDESYGMMFQLTSGGCRSAGGFSNIAYGADSAPDPNDGVNREASHYWLDKAEFYNWDVRYFDSPADLHEQLKQADFEAMHRDVLKTRARMDKIRDERWAEIRRDLTKISSTPA*

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300007741: Marine sponge C. singaporensis microbiome, Papua New Guinea CO2 seep, Dobu 'bubble', co12ds 200bp-25jan2016

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences