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Sample 3300007969
3300007969: Human stool microbial communities from NIH, USA - visit 2, subject 159369152 reassembly
Overview
Basic Information
IMG/M Taxon OID 3300007969 Open in IMG/M
GOLD Reference (Study | Sequencing Project | Analysis Project) Gs0063646 | Gp0053152 | Ga0114312
Sample Name Human stool microbial communities from NIH, USA - visit 2, subject 159369152 reassembly
Sequencing Status Permanent Draft
Sequencing Center Baylor College of Medicine, J. Craig Venter Institute (JCVI), Washington University in St. Louis
Published? N
Use Policy Open
Dataset Contents
Total Genome Size 57754211
Sequencing Scaffolds 7
Novel Protein Genes 7
Associated Families 7
Dataset Phylogeny
Taxonomy Groups Number of Scaffolds
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales 2
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes 1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Subdoligranulum → unclassified Subdoligranulum → Subdoligranulum sp. APC924/74 2
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae 2
Ecosystem and Geography
Ecosystem Assignment (GOLD)
Name Human Microbial Communities From The National Institute Of Health, Usa, Hmp Production Phase
Type Host-Associated
Taxonomy Host-Associated → Human → Digestive System → Large Intestine → Fecal → Human → Human Microbial Communities From The National Institute Of Health, Usa, Hmp Production Phase
Alternative Ecosystem Assignments
Environment Ontology (ENVO) Unclassified
Earth Microbiome Project Ontology (EMPO) Host-associated → Animal → Animal surface
Location Information
Location USA: Maryland: Natonal Institute of Health
Coordinates Lat. (o ) 39.0042816 Long. (o ) -77.1012173 Alt. (m) N/A Depth (m) N/A
Location on Map
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Associated Families
Associated Scaffolds
Sequences