Sample 3300008496

3300008496: Human stool microbial communities from NIH, USA - visit 1, subject 160178356 reassembly

Overview

Basic Information
IMG/M Taxon OID	3300008496 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0063646 \| Gp0053217 \| Ga0115078
Sample Name	Human stool microbial communities from NIH, USA - visit 1, subject 160178356 reassembly
Sequencing Status	Permanent Draft
Sequencing Center	Baylor College of Medicine, J. Craig Venter Institute (JCVI), Washington University in St. Louis
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	125865402
Sequencing Scaffolds	22
Novel Protein Genes	39
Associated Families	39

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → Viruses → Duplodnaviria → Heunggongvirae	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Ruminococcus → Ruminococcus bromii	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii	3
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Rikenellaceae → Alistipes	1
All Organisms → cellular organisms → Bacteria	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	10
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Subdoligranulum → unclassified Subdoligranulum → Subdoligranulum sp. APC924/74	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → unclassified Faecalibacterium → Faecalibacterium sp. Marseille-Q4896	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Human Microbial Communities From The National Institute Of Health, Usa, Hmp Production Phase
Type	Host-Associated
Taxonomy	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Human → Human Microbial Communities From The National Institute Of Health, Usa, Hmp Production Phase

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	Unclassified
Earth Microbiome Project Ontology (EMPO)	Host-associated → Animal → Animal surface

Location Information
Location	National Institutes of Health, USA
Coordinates	Lat. (^o)	N/A	Long. (^o)	N/A	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F041208	Metagenome	160	N
F042095	Metagenome	159	N
F042910	Metagenome	157	N
F043413	Metagenome	156	N
F043945	Metagenome	155	N
F047125	Metagenome / Metatranscriptome	150	N
F047126	Metagenome	150	N
F050794	Metagenome	145	N
F051934	Metagenome	143	N
F057001	Metagenome	137	Y
F057385	Metagenome	136	N
F058154	Metagenome	135	N
F058555	Metagenome	135	N
F064725	Metagenome	128	N
F068855	Metagenome	124	N
F068856	Metagenome	124	N
F073656	Metagenome	120	N
F075481	Metagenome	119	N
F076189	Metagenome	118	N
F076653	Metagenome	118	N
F077313	Metagenome	117	N
F078003	Metagenome	117	N
F078005	Metagenome	117	N
F078006	Metagenome	117	N
F080673	Metagenome	115	N
F082715	Metagenome / Metatranscriptome	113	N
F082887	Metagenome / Metatranscriptome	113	Y
F083452	Metagenome	113	N
F085718	Metagenome	111	N
F088921	Metagenome	109	N
F089053	Metagenome	109	Y
F089590	Metagenome	109	N
F089592	Metagenome	109	N
F090514	Metagenome	108	N
F092228	Metagenome	107	N
F098313	Metagenome	104	N
F101191	Metagenome	102	N
F102167	Metagenome	102	N
F106193	Metagenome	100	N

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
Ga0115078_100038	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	154073	Open in IMG/M
Ga0115078_100391	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Ruminococcus → Ruminococcus bromii	46382	Open in IMG/M
Ga0115078_101937	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii	11098	Open in IMG/M
Ga0115078_101944	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae	11074	Open in IMG/M
Ga0115078_102746	All Organisms → cellular organisms → Bacteria → Terrabacteria group	7670	Open in IMG/M
Ga0115078_102906	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	7221	Open in IMG/M
Ga0115078_103118	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Rikenellaceae → Alistipes	6631	Open in IMG/M
Ga0115078_103519	All Organisms → cellular organisms → Bacteria	5756	Open in IMG/M
Ga0115078_104943	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	3913	Open in IMG/M
Ga0115078_105253	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	3657	Open in IMG/M
Ga0115078_106123	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	2999	Open in IMG/M
Ga0115078_106392	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	2833	Open in IMG/M
Ga0115078_106905	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	2591	Open in IMG/M
Ga0115078_107655	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	2281	Open in IMG/M
Ga0115078_108551	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	2006	Open in IMG/M
Ga0115078_110047	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii	1656	Open in IMG/M
Ga0115078_111131	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Subdoligranulum → unclassified Subdoligranulum → Subdoligranulum sp. APC924/74	1475	Open in IMG/M
Ga0115078_112308	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii	1310	Open in IMG/M
Ga0115078_113010	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → unclassified Faecalibacterium → Faecalibacterium sp. Marseille-Q4896	1225	Open in IMG/M
Ga0115078_114546	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	1076	Open in IMG/M
Ga0115078_114693	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	1063	Open in IMG/M
Ga0115078_115279	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	1015	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0115078_100038	Ga0115078_100038108	F098313	MEFDFVIYPLKLIITVGLDYKTLCDRFENMEPEHEGKWGDEDDMDKEASFANLVRDRDDDDKFAILWNFSSDDDLIMRNICHESFHIAMSVCQFCNMSLGFKVGEDEHAAYIAGFAGDCVSEFINSKNTD*
Ga0115078_100038	Ga0115078_100038133	F076653	MTIRDKYFGWKDIFFDRFVHCCNEKSDQPQGSNIPLAKINFDNKTGYVEDGTINIAELLQYLWINNKVYKCEYAPIDISSVLQTLIRLTENAKFIFDDQPGIHDMIPYRGFFIRDDFLPGKDYSLDLDKIVSGMGGWYGEDEDPCYSMFVSQDQIWNLNPILKVLADEGSILAKELGYDMNSYVSDNGYTIYNPYLSWINHYYHYCPTFNEDKLKPWDRVEDRKNKFKMTDKVKRGANNWYYSGGTISCVDNFLGKEYRKNLRTFIYRGIVFFLDRIWHTPLFEKMGVKMKYNAYYCYAATSGIWYDKGFKERLAKRFNKSLGGDGELFGANLACMVCDRKDIDWEALRFWLDKYDDPTDKGMVNSPIQFMYLYLYYSFNK*
Ga0115078_100038	Ga0115078_10003814	F083452	MSGRIKIKPKNKDKKPDIDVFKIIENRFKNMNELRDLIDMDPRKGLVRIRDGAGFREVERGGCLHRNYLNLLEEELGAKLSIDLIERYIKR*
Ga0115078_100038	Ga0115078_100038162	F078005	MKKSEFVKALEKIIDMVKIEDDGFEYGGKVIFYKEDDDNYEITVKNIEMDLMVEASAMASMDDRTFACLMSEVYKQKFTKAITISEDEDDEDN*
Ga0115078_100038	Ga0115078_10003817	F102167	MDINQIKTYLPSGWDVVDLIDHGIIDLDIMNGKMMGEYMAVLMIKSYDKITESHNLTTFSFHDKDMGGLRRLVSNAIMAVGLRNNPLKGDGNTATK*
Ga0115078_100038	Ga0115078_100038191	F085718	MVIEFDFEIYKNGDYDKVYLRNGKEPRVLCDNGKGNSPMVVMIEDDKADDYIILRYNETGRRNINGQSGLDLMLSIKEREPELWVVVISYMDNKDKRQKMVLPNFFSKNIRGNIYLQGSSKSSVSYYVDKLEEDGCFDELCEKIRVKRDRIYNMEIISLSDDEATV*
Ga0115078_100038	Ga0115078_100038193	F078006	MGDNILRKAAEELKKAGCRVFAWQDDTYNRGWSKGDYIMLYYAFPDSPNIGYLSHGEYGMSVAYSRAYIPSCGSGSGCCVKEEATFDLETALDVLNGPLPRWCRSYGVYPKQYDNIDKWYNSDNHNKKLFKEI*
Ga0115078_100038	Ga0115078_100038199	F080673	LATIEINMDEIELLRLQDEALSYLRDNITKDEAYYVLTTDKDMIEILIADKKDGSKRIKILDMEYTIEKDDMLLLFDTDGIIDECLLVASYIGVNMYFRRQDVNAILNNINREKVMKYPYIAIQLDNIQTIEKRRVIFEITGHRVDYDKVDFMFVYFMARIL*
Ga0115078_100038	Ga0115078_10003833	F058555	MGTKISLLQKMKSNFDKILTEAYIPKDIQAKKDELGCLRLPAGSLVCPVDYKPVTNKDGKKVTAVKYSNKKDNIRGSGMVIEKKCKQVVAYLTIVNVQKHVFLRNRMRDGYRDRIEINTDDFIDILSDGIAYFCYKHVIENCHEDIDYQLKTLKAYAEGEIRIALSDIMIYSYKAKKNEDTKEIFVGKKRSVYKCLNKNLSSDERRNMANKSRKLDRVRILSKIIFRARTRNVHHIYKVTKRKTVKFNVAYLLNELNKKLIGIGMREISQSTIYRYISMFLDMCKKNISDLYDEVKKNNGIANAKDRKNVTIGHLRLSYRGTIMHIIIAECFIKDVFLGVKGVEMDKAG*
Ga0115078_100038	Ga0115078_10003844	F089592	MKEILKSKKVLVEVNGFNIMSDTLYEVVGKHDGSAPQAFQDANIAKAPFPENATHVCCPWDDFSKAYNTGFYPRSRCYNGMDKDEVDRLVNQRVNNIMKPFEDISQKDLSQTNLEFWDDAKDKIFMGKVYNTANTVELFYLYLAVFSGMLTPQEMDGDPVFMNSMFCFVEKDNMKDFVQQREINKMNISYKFISALKKGGDDRQAVIDLLLYIGIVTRPDFTEDEYYTGSLSNWMNEKKTNVDYLLDIWDRSLEGDFKEVLEFYRIVNVLQRNGRINMTPSGLQYNGQIIGPDVRTSAEFLATKKDFINIKANVLDEYEEIMSMSNIDDKSKTKKVKDIKKKDDVEEGDKIKEE*
Ga0115078_100038	Ga0115078_1000385	F057001	MARANLMTGKDLNKVQNEVKKASEKTLTGAVKAWCQLFKSGKEVNEILKDNDIKVDKAVVPALVALAKDKEEVIQLCKEILPRVNDTFCAYKEVEREYYDKQDQANNSKLPSDKVNDIAVLGDTHKRFGYCEPIAYNDTGSVPYYEVFNGSDKRIVKVAIPIKRYTYNLIAKCITYYLTHPKNGK*
Ga0115078_100038	Ga0115078_10003853	F042095	MAKTLYKYEASSNKFVWFTTWDRALRNYYTNDYNYVPDPVVGNPYNTFVEFRSRKPGMANVDWGDGIKEQFPMTKVQGKDNYRIIFRSLAIQHRKNPNTTWWFRKEDGSQYVPVDNHAYADGRRDVQRAVSIDFTCDIYYANIQSCRMTSFPIVDIPGLEFLVVSHTLYVNDGIPVDKLSRSKKLIYIDLQNMGQRTTVISEAITSKTEVYYLNMFNMLDLRDIESSGIRNIKNMKNLQTLNLSSCYLDRYIKEFNDLPKLTSLNITSGPPDMWNYFDINTLPFFEVDKINPNITDFAFLDDWMNGERRTGWNDDNMSGRGLEHLTGFIAANSNSLRMDKLPDYIYEMRAITGFNVDASTHSQKRSDDFVNSFYDLVVGWDQITMTSVAKDGKRNQFYSLSVSMYNAVYPTENQRPSGTEQAPEGFVKGSSNGSPATPMEKIYVLKNNYAQRWTIKPE*
Ga0115078_100038	Ga0115078_10003856	F089590	MKDKDMIERVGALWNIALAYGASCWAYFQPVHHLLTVLLIVLIANFLARLAQSVRGWKLRRSRRRRFSFKRWLREVRFTDILKEFALSCFIVMTLCVIYKTLYPIEEEASMILTVTKYGVYIALVGYVMLFLNTIGDAFADAYLVKVFKAVFKRINVFKMFSFSKNIPDETFDDIKKIADDEVKDKS*
Ga0115078_100038	Ga0115078_10003857	F075481	MRLRISLRAIFCLGLSLSLSSCGSRRQVSDTSIDNRLISRIETMIDEVMDRKIVEIRTSDLNADIVITERKFDTTKEVDPSTGERPVSSQTDAHIVIGRRDSTVTVDSLGIDKTITGVKDIDKKTDIEHKDVDDKKESRWPIAITSISVLLILLVLIYLLKKMKVL*
Ga0115078_100038	Ga0115078_10003865	F106193	MMNHSSSTAVSDMEYASRSTAGCMVMQDPLQTMERDVVSIYKQVRTKGDGVGVSYLNMQKKIREWIKNLPYGCPPDEEVQEMRKEILDGRAEHIKP*
Ga0115078_100038	Ga0115078_10003882	F064725	MTIKGLLAEIKADLHKYDDSGAIDTSSVYRWAEIALKRFGGVIAVMSEAVVKTSNKQAVLPSDFFDMLDAYRCEPLVCEIPGGDKAKADLQHEIGWVERTERGFRWNSCTECCKEEFEKTITERIYIGSHEVRFHYHHPVRLSIGRGLRRDCAADKYRDKYDWDNYDITISGNTMYTGFDGFIYIIYRATPKDDDGLPYIPETALGYLEDYVETYIKMKIFENAAVNGLIQGAGDAYKLYAQQEPGKFARAMKELKMSMITLNDYRELAEDNRRRMLSHERMWPNAFDKYIKLI*
Ga0115078_100038	Ga0115078_10003890	F077313	MSKYVIKRKIPKYQEAGEVGSYMLGNMDGIQGLGIEPLVNTNQGLPAPVNPLGIYSLDTPDQLRTKYANAFDQDNVFPASFKGSLQHIAENYQDNGITLNNITVNDVDKSKTGSGETDVFDFTTIPYYGADDIGSRFTQMGRGIGRMRSEGYGDLSTKAKTANVVGTVMSGIGGVLGLARNVFSGMASEQGTSTNIRLAQEREARQRRQSQMRYKDGGGVYLGPNNRFDSGSLTGEYLYPLPKSMEGQANVEVEKGEYVTQPGEAPMEAMGQKHADGGTPVSLEEGTKVITDDTTIEPDFAKYIRDTYGIKATPKDTYATLMDRYKAKIGLKSAYDDQKKALDKLKKNDKIDDENTRRLNASVLSKAINDSNDTVNGLEGRFTDFANVIYREQEDRKMKKDEDTYFAKGGEIDNIISRSMKEYGLTEEDIAEAKKELLKKVAGIRQKMEKGGSSLFDYLLTFRPVENKYNNKDNAFGYQRQGQDGSYGGINTDERLEYYKTFMPLAYDAYMSAPKATAAKALQDAIYSTTGGWMGLATAENPIIANAEALRDYTTLVSFGGEDSQGNYPEDKKASYHDRMRDNKFGQYSSSRPMIGLDVVTEEQHKALNDAGITHFSQLFSDKNKDIVNKILGEDMLKMQALRFMKGMEGLDFILDPHKVAPGPMDIGDVEDPDVKLDMPELIDPNTLPKTNTNAGKSNGGNGGRNIVGGGLDFPEVFRMTPGAVTTEGLERHYAPTVDPVLRSADQYMVEANRAFQSQLDQMGNVPDSQRGALSSNLQAIMSSNIGKYINEVEQGNVAQRTWADNVNSQSWANTYDKNIAQRQAYQQRILQGLAINDENWARYFDSVNDEIQQKWNTATTMNTLRSIFGDVKIGPNGQLIADPQGDILSYRILYPAQEVTKGKKG*
Ga0115078_100038	Ga0115078_10003893	F050794	MLYTSNYFVKVRQKQLLDHTYALSRDQAFDYMTEFNKRLSDKVGIKCTMDVLLPTDDDNANIIIEHNGIIKKLMREAEKLELDTDAIKVMMRDLLNELKDDVDLNILIFDVTQLLIKYNLFRLEAITEQEFKNSFVRMDSRNMEIKKLTLSDIKKVVMMIEDRYSYALYMTEEYG*
Ga0115078_100391	Ga0115078_10039129	F092228	MKKKCTLVLISVLTVACIVSAYLLFFYNPSFNMVYDSDTDSYFNNSYLSYNDGTLAAADYRKTKVTAYDSKNNSTVNLPSNGCLINDNLFYINGNKLCCLDTTTNTRKIIDTDCRSFVCNNEVIAYTKNDSVILKNSDTLENIGDIKFDNQIYYINISDGNLYIAERIFEDETDEYGYSLKVGKQYIFKKYDLKSCKLLKSKNANYVNGLRYVTVCKDNFYFFCDETQTVNNVCLDKDVNYPTIQHPDVKFITSNNDCVYYISEKTESAIICKTVESPYNGIWKLEVGSNKPVKIADKCDCDELLATKNFLYCYTINYILPRGVANSWVKCYLIDQLAIS*
Ga0115078_101937	Ga0115078_10193713	F089053	MEGPRPDKFAFGVRIGRVVDECRPVKGCIRKWIHGFAYGQPELSTAGEVNVKNMEVSL*
Ga0115078_101944	Ga0115078_1019449	F068855	MRKSLALQGLQAEKESENANVQNAGWLHSLDADYHYRGSDLHYHVNVSAALSEGGAVW*
Ga0115078_102746	Ga0115078_1027462	F082887	MERVKTIAKYLTNILAIVSALVAGINAVDGITIPYAIQIVQIIAVVQGVIGTYLLGQKAISNKEE*
Ga0115078_102906	Ga0115078_10290610	F082715	MMKFMKRSLSLLISAMLLLGCFALAEETPLLPIAIVSSALTDEATTAALSALIEPKENALTRWERVVLSDGREAWVICQFDQTTMSNAWSRVIDAETQEVLQEDTTDTGFFATAQARWESAKGIYALWSIQDKMLFDRLYAMAPCYGEPVEGDLTQEEALAAALNVTGLTAADYDAVGYGYIMGSSEQNGTWQVFFVKGNDVVSTVNLDARDATILLVEPDEEGNG*
Ga0115078_103118	Ga0115078_1031188	F073656	MTMEQDQEQMQGALYVAVDDGNKIIAMERSRRGDEGFRALLDEFTDYAANCGAIPSVLFFDIRTTDAALLPRIEAAERSYLLDPSTATEKLDIRHAVTLKDLLYCCKYGLDPLAEGNCSNMLSTKADYRQFRNEGLPPVAREDLRCCRAVETERGTVLFTQEPDGREACERYMQHHADCFFDPDLGVETLRVYEVEVDPDGFWDKVNPQVLPTAGGMMWVPEHPFVDAEVLRRGYCLKEYDMRATADNFWAFADPQHGENLYVSNGIRDLTGLQIIMQRGYGYLMQNAERYWNREFVFRSGFDNIERKYASDLSDEGRAAKREEQYNLAAYILDRKFPIRRRPSSEIPPMQAEGIRTFRNFDAINLLFRPDKLLEAYQRRRDEPVRGTEFHLKRH*
Ga0115078_103519	Ga0115078_1035193	F047126	VYLKTKKMTNISQTQAGFKSKSLGSLCGFQGSLTQNPAALVETDDIFDVSDTPYGFSGLNTLRAAGVPNPPPPFAQRFIACFCSQTAAVSQSESAYILSSLESPCILCSLLRYFHILSKKLQKTC*
Ga0115078_104943	Ga0115078_1049434	F078003	VNEHLAFAQCLQRVLSETELTATEVARRLEMRSRNSIFRILKGKTSPQLNRRFLESFHKQMGEQLTEAQWAALNRALEMDAVGAVEYKSRQALMQLVGAFSEPISPAKVCYLDALGAEKEDSFLHYLQVLFCGALKVNALLFGCCDLGLFRQLQEAIHPVAQRVIVRIDHFIYAGEDEIVSNLVGIQPMVDQPCYHAYLVDAENCPQERLAHYRTGQMTFHVMHQDGSESTVALFLLGKNEFTATVMSTQDLWMSRKVLCDRERFSPIRLLWQLNDENSDFIVYTQQYCKMEHGAAIYYIRPDVPFQYIPLEVLYPVVREGFARMGMTREEYEPNVTALAEIHQARMTNMMRRRRPTYIVLNKAAMEEFVRTGRQSDHLHFLRNFTPKERKQILDVLVQQARENPFFHLYFAQEKLPCTMGEVALYDGRALITMSSGSGYDLRTDHRESCITHPFVLRAYKQFYMNTVVARLADTQTESLNQLEELVRRCEKMIREGQKGNAGNEQEKISGQ*
Ga0115078_105253	Ga0115078_1052532	F041208	MRKILAMLLSVMLLLTAAVAETSAPYAPETVLPLVANNRPYRDFARGAISSSEDAIEQAKAWLYLPLFVTNFSAKSEAVDWSAMRAEEGWYVTAYMRNTFVWLLMDEQGRVQAYDFDLLGNASLTYDGALPDNLDEAISSYIRRFADLNGLVEVADYAREEVTTFGDYAVALTVRVTLDGTPYRFTMRLDMMAFTSVENANLHPTAAQTQRDILLLMRDNLAEKGVDITQTFFAVQTDDADGETKLTGIASFPADAASDAIREQYGELERYTLHYSGRASEAGIERVELSDWQETTATAQFPLALYALVDGKYLVPDGELAAGTAYLALDSMGLRGRNVIPLESITMLTRIRYARADGTFAESWVSSDTLTENDAAPAAPKREPIPTLESYQITLSGTAYTAFAINKVEKGYDAFADIAGTQTAVVDVLTSAAQGVIAEYGVDASDLLCRTVVEYGYRADKGCWQVDFTIPQRDMADDAYEVEVDDKDGKVTGLWGPQDGNG*
Ga0115078_106123	Ga0115078_1061231	F058154	MKNRTFQRLFPLLRMGSILLAAVLFCAALIGVNAQLTVGTNEERNLATYLGLALTAVVTYLLQDVPKMLVGRHFGWKLVRYEAFGRVYQADGTGAFVRVPVPAQSRLRYQPYLLPPEDAPRHDVTLYTLCPLLYGGALAVVFGVLTLLTLGQPVSLVLCELAMGGVVLVMMCILPMDERFIASPMAIARMLRDPEQLAEWLYFARMKANGGVKVTDVSIENIPQPATVKTCQDAICVFQRAQIALMVQCDAQKAYGLMKQVLESEARLSYTAWKLLLSDGVVAELLAGEPGEFTALYRGKAGAAIRQVMFRMVDYALPAYAVAMLVTHEAREAEVVRNTLAPVREKMPELDALMKAIEEKAARIES*
Ga0115078_106392	Ga0115078_1063921	F068856	VKDSGASAEGNVLAAAHAVLGKERKGMKRLTSILLALLMLVGMALAEEKSDPILGDWYALNTENEAICLTLREDSTFCYDSREGTWRKTTDGEYWLTYNIHDLPEVMERMVNSQAAEQDLTALLTETGLDVYYGSTAKGVVAHMVRDAEELQNVRTPKTDTPLEAFAGTWTMETVFAGAMEMTYTLDKGERLAFCTIDGLTMLPGAALGNFTEGTSYPMTLEDGKLHTTLTLLADAEGDFSLTFFQTEDSSMYANLEYNNGKNALKTMFLLVPMK*
Ga0115078_106905	Ga0115078_1069051	F057385	QESTIAIHDLNADLVAALGGDDTTMAAINDLLAALSLTGYQQGDEAGFDLNLSGKSVLGMASLTTAAEENQLMYVSSALLGGVIAVNSKDVEAIKEKALRATMKMSGQSDEEIDKAIEESKEQLSGNAEYTALMEASANLGSMTEEQLMEELTQADTTAFMTMMNEILSGAEMAEVTEQPGDCDAAKSYVKVTVPPEKLAEMTKALLEMIHSVPSIGAYMDALFSAADTSWDDLLKELDEADLYADDIVYEYWMTEAGELVRMTASVKINNGGEEPLPMSFTATRNTADGVATWLVTIKSAEDTAATLTFAGDLENFTANLTAYAGEDSVEINVSGKGIGTDSSVVDVEIKETVDGVEQGFGVVVTTATTMDGEQGVRKVDVLVRFMGLDVVTITAETRTCDAKDALDVSKAQDLGAMTDSEFQTWFVKVMNNLQNLPMTLLMSLPESMLTLLMGGSN*
Ga0115078_107655	Ga0115078_1076552	F051934	MGLMRRLAVAALAAVLVLSTALGERVTFRLSADIDPVQYPAQERKLAQGLKSLFRLLTVEGDVVASDGSFDARIDLGLTNAPEKTATRIRFFGLDSHWGIQSTTLGGETLMVNQLAWLEFAIKAYNHLDLPLQRVFLWLSPYAHTSAWAGLRQAIADLAAQENDGRLENTALITCAEEIARLSEDDRALYYYIEAFGLESGTDANIFDALATLPEYVEANFPDGLSIEHTENGVSWQNGEETVFSYAEADGTQVVSLHLPDLVDFSATLRRDALLFTGALSLQSDVLNAQVSFSLPVSYPVTLPFYAQIDADGMMTGDDGIHLAFEGEAQGDTITIRRIQPDHSATMMTLTVKVIQVVEGTVKYAPEDVQGTNVLSVDGPALAELMGRIGKPMVRKVTQWLAALPAELVQGAMDAMEDSGLLGT
Ga0115078_108551	Ga0115078_1085512	F043413	MTERELREKLQSAYGTMPDATRAAFEHSLTHHRVETRNPVRMSRRMRTIVTLALMLMMLTAVGVAAAKLASVTDYPPPSGLTPEYMSHLVTLNEAYDGDLLTLSVNDLVFDGTTVDVAMNVQPKAGKQVFMDMEVTAECEGRAYTLEIEGCGGGDFMSGMFLPDETGSWSDSPFGFDGVLWDDDMQSPPEGTPIAWTMTFELLQPVWKVEYLPDAQYQALLAGGADTLEAYVQNNWRQHIITVTYGSLVEYQYAAEAAMLADGTITEPLSGSRTEQLLSCGGFRRADTIIVQFTTDFADDYAHPELVGKRIGMGDYDLVIDNVNLSFMRANITMHYEFSAAYTEDEIRQMTNLPNAWRVYVNGQTEAGYDAYANFQQVTNGAYGVDTPEQLTVGFDFYPAETDITRLTFVPIRNMGEKWDACHPDAEKGFTLELQE*
Ga0115078_110047	Ga0115078_1100472	F047125	MDVVLLLMVLGVMLSGFRAADALDHLRKEIIRQEGKRRGWWS*
Ga0115078_111131	Ga0115078_1111312	F088921	LEAAKKIAVKTSALGATIRLYKIGARKNHFLCSEKSKSTVFDLDRETKKRKYAKETCRIYIEKDQNMQEEKKEKYINGEIYGEKNQIIVANKSAMIRDKMRSK*
Ga0115078_112308	Ga0115078_1123082	F090514	MNLRIHALKKASRQRPGVKIAAARFFSILYYPFCAKRSSFFQQNVQPRGNFFANRPIFVYFADIPPCLTGTKWFVILLTIVPAGSRTRAGSSLPLIPASNIF*
Ga0115078_113010	Ga0115078_1130101	F076189	MPGRLCYLPGIAFFLSPFIKPLLYVEKLQTGTVLPVVSDLYREFAEPSVHFDSHAIQSAQKQLRMLCNFHENTFWLLIFYANYAIL*
Ga0115078_114546	Ga0115078_1145461	F042910	GGGGEAGGVLTLHEDGKRVLRVVCTQYPTMSTLNWLETLSLVFTAFSCPYWEDAAETSFLMPNTSDAPSKLLAVPGDAPETPLNLLIRNIGDAAITTLTISAAGKISFQGLTLAPGAAIRIHHNAGVFAAEMVSDDSTVSILPYRTPDSADDLLLRPGVLNEIRVEASAAAFVSGRCKGRYC*
Ga0115078_114693	Ga0115078_1146931	F043945	AVAGRHGTGSRCRTDVTSALPFEDELFFISGSQLLRVDDPEYEPEVVCNLEDIIWSEALKQSGYYGQVMLLNGGAELVLFSANEGRLYSFVPPTDDTMVRMQMVAELDYSTVPQMGWKKFPIAKDLYDVTVEQAVYDAENGLYVIAKDKTDEYQIVRFDVDTGKGEMMEFALEDEEDSHLIPDMPGFFRWSAESSKYERTLYDGKVLTMVNLPNGEATSVVHNLVNTLTLQPIQDYDVTLGDYVTHDAYYAYAPNKDNTAMYFVHDNTVWVMEYDEENSQFSEPRGIDKLPFFAEDTMCGFYWRGFYLIQTHDGLYLRHTGGETARAYLYGEVE*
Ga0115078_115279	Ga0115078_1152792	F101191	LLISHHPAPAECLQLGEGMLLCGFDLDKALSSRDPLDCMAEAVADDTKRIGTTCGGGIFRAVPREFDPESGSHRLPFAGSIRLIDWRVTLSGTMLDVTPENLARLLPSDTEMTERVTTLTPKQARKPLSRLCWIGTTSRGLLLIELRNPLCISGASLTSVPDGAGRLPFTFLAQNDRPGDVNLPARLYWWKEETHDAA*

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300008496: Human stool microbial communities from NIH, USA - visit 1, subject 160178356 reassembly

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences