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Sample 3300008640
3300008640: Human stool microbial communities from NIH, USA - visit 2, subject 763901136 reassembly
Overview
Basic Information
IMG/M Taxon OID 3300008640 Open in IMG/M
GOLD Reference (Study | Sequencing Project | Analysis Project) Gs0063646 | Gp0052994 | Ga0111422
Sample Name Human stool microbial communities from NIH, USA - visit 2, subject 763901136 reassembly
Sequencing Status Permanent Draft
Sequencing Center Baylor College of Medicine, J. Craig Venter Institute (JCVI), Washington University in St. Louis
Published? N
Use Policy Open
Dataset Contents
Total Genome Size 141074577
Sequencing Scaffolds 9
Novel Protein Genes 10
Associated Families 10
Dataset Phylogeny
Taxonomy Groups Number of Scaffolds
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes 3
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales 4
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae → unclassified Lachnospiraceae → [Eubacterium] rectale 1
Not Available 1
Ecosystem and Geography
Ecosystem Assignment (GOLD)
Name Human Microbial Communities From The National Institute Of Health, Usa, Hmp Production Phase
Type Host-Associated
Taxonomy Host-Associated → Human → Digestive System → Large Intestine → Fecal → Human → Human Microbial Communities From The National Institute Of Health, Usa, Hmp Production Phase
Alternative Ecosystem Assignments
Environment Ontology (ENVO) Unclassified
Earth Microbiome Project Ontology (EMPO) Host-associated → Animal → Animal surface
Location Information
Location USA: Maryland: Natonal Institute of Health
Coordinates Lat. (o ) 39.0042816 Long. (o ) -77.1012173 Alt. (m) N/A Depth (m) N/A
Location on Map
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Associated Families
Associated Scaffolds
Sequences