Sample 3300008798

Basic Information
IMG/M Taxon OID	3300008798 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0117972 \| Gp0126354 \| Ga0103765
Sample Name	Planktonic communities from eutrophic pond at the campus Essen of the University Duisburg-Essen, Germany - sample KO-3
Sequencing Status	Permanent Draft
Sequencing Center	University of Duisburg-Essen
Published?	N
Use Policy	Open

Basic Information

IMG/M Taxon OID

3300008798 Open in IMG/M

GOLD Reference
(Study | Sequencing Project | Analysis Project)

Gs0117972 | Gp0126354 | Ga0103765

Sample Name

Planktonic communities from eutrophic pond at the campus Essen of the University Duisburg-Essen, Germany - sample KO-3

Sequencing Status

Permanent Draft

Sequencing Center

University of Duisburg-Essen

Published?

Use Policy

Open

Dataset Contents
Total Genome Size	96139700
Sequencing Scaffolds	20
Novel Protein Genes	25
Associated Families	21

Dataset Contents

Total Genome Size

96139700

Sequencing Scaffolds

Novel Protein Genes

Associated Families

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Gnathifera → Rotifera → Eurotatoria → Monogononta → Pseudotrocha → Ploima → Brachionidae → Brachionus	5
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Gonyaulacales → Pyrocystaceae → Alexandrium → Alexandrium andersonii	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	4
All Organisms → cellular organisms → Eukaryota → Sar	6
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Suessiaceae → Polarella → Polarella glacialis	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Gonyaulacales → Pyrocystaceae → Alexandrium	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Gonyaulacales → Pyrocystaceae → Alexandrium → Alexandrium catenella	1

Dataset Phylogeny

Taxonomy Groups

Number of Scaffolds

All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Gnathifera → Rotifera → Eurotatoria → Monogononta → Pseudotrocha → Ploima → Brachionidae → Brachionus

All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Gonyaulacales → Pyrocystaceae → Alexandrium → Alexandrium andersonii

All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae

All Organisms → cellular organisms → Eukaryota → Sar

All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Suessiaceae → Polarella → Polarella glacialis

All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Gonyaulacales → Pyrocystaceae → Alexandrium

All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales

All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Gonyaulacales → Pyrocystaceae → Alexandrium → Alexandrium catenella

Ecosystem Assignment (GOLD)
Name	Planktonic Communities From Eutrophic Pond At The Campus Essen Of The University Duisburg-essen, Germany
Type	Environmental
Taxonomy	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Eutrophic Pond → Planktonic Communities From Eutrophic Pond At The Campus Essen Of The University Duisburg-essen, Germany

Ecosystem Assignment (GOLD)

Name

Planktonic Communities From Eutrophic Pond At The Campus Essen Of The University Duisburg-essen, Germany

Type

Environmental

Taxonomy

Environmental → Aquatic → Freshwater → Sediment → Unclassified → Eutrophic Pond → Planktonic Communities From Eutrophic Pond At The Campus Essen Of The University Duisburg-essen, Germany

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	freshwater biome → eutrophic pond → planktonic material
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline)

Alternative Ecosystem Assignments

Environment Ontology (ENVO)

freshwater biome → eutrophic pond → planktonic material

Earth Microbiome Project Ontology (EMPO)

Free-living → Non-saline → Water (non-saline)

Location Information
Location	University Duisburg-Essen, Germany
Coordinates	Lat. (^o)	51.46	Long. (^o)	7.0	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Location Information

Location

University Duisburg-Essen, Germany

Coordinates

Lat. (^o)

51.46

Long. (^o)

7.0

Alt. (m)

N/A

Depth (m)

N/A

Location on Map

Zoom:

Family	Category	Number of Sequences	3D Structure?
F000023	Metagenome / Metatranscriptome	5736	Y
F000241	Metagenome / Metatranscriptome	1481	Y
F000306	Metagenome / Metatranscriptome	1332	Y
F000592	Metatranscriptome	1003	Y
F003249	Metatranscriptome	497	Y
F004604	Metagenome / Metatranscriptome	431	Y
F005209	Metatranscriptome	408	Y
F015562	Metatranscriptome	253	Y
F016241	Metatranscriptome	248	Y
F016242	Metatranscriptome	248	Y
F017489	Metagenome / Metatranscriptome	240	Y
F025035	Metagenome / Metatranscriptome	203	Y
F031523	Metagenome / Metatranscriptome	182	Y
F031766	Metagenome / Metatranscriptome	181	N
F039474	Metatranscriptome	163	Y
F040635	Metagenome / Metatranscriptome	161	Y
F041782	Metatranscriptome	159	Y
F061886	Metagenome / Metatranscriptome	131	Y
F067773	Metatranscriptome	125	Y
F070863	Metagenome / Metatranscriptome	122	Y
F080070	Metagenome / Metatranscriptome	115	Y

Family

Scaffold	Taxonomy	Length	IMG/M Link
Ga0103765_1004753	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Gnathifera → Rotifera → Eurotatoria → Monogononta → Pseudotrocha → Ploima → Brachionidae → Brachionus	1213	Open in IMG/M
Ga0103765_1005316	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Gnathifera → Rotifera → Eurotatoria → Monogononta → Pseudotrocha → Ploima → Brachionidae → Brachionus	1150	Open in IMG/M
Ga0103765_1005871	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Gonyaulacales → Pyrocystaceae → Alexandrium → Alexandrium andersonii	1092	Open in IMG/M
Ga0103765_1008488	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	896	Open in IMG/M
Ga0103765_1013496	All Organisms → cellular organisms → Eukaryota → Sar	693	Open in IMG/M
Ga0103765_1015190	All Organisms → cellular organisms → Eukaryota → Sar	651	Open in IMG/M
Ga0103765_1015709	All Organisms → cellular organisms → Eukaryota → Sar	639	Open in IMG/M
Ga0103765_1016202	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Suessiaceae → Polarella → Polarella glacialis	628	Open in IMG/M
Ga0103765_1016778	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Gnathifera → Rotifera → Eurotatoria → Monogononta → Pseudotrocha → Ploima → Brachionidae → Brachionus	616	Open in IMG/M
Ga0103765_1017648	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Gnathifera → Rotifera → Eurotatoria → Monogononta → Pseudotrocha → Ploima → Brachionidae → Brachionus	600	Open in IMG/M
Ga0103765_1017752	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	598	Open in IMG/M
Ga0103765_1018562	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Gonyaulacales → Pyrocystaceae → Alexandrium	583	Open in IMG/M
Ga0103765_1018611	All Organisms → cellular organisms → Eukaryota → Sar	582	Open in IMG/M
Ga0103765_1018849	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	578	Open in IMG/M
Ga0103765_1022684	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	523	Open in IMG/M
Ga0103765_1022732	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	522	Open in IMG/M
Ga0103765_1022884	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Gonyaulacales → Pyrocystaceae → Alexandrium → Alexandrium catenella	520	Open in IMG/M
Ga0103765_1023390	All Organisms → cellular organisms → Eukaryota → Sar	514	Open in IMG/M
Ga0103765_1024300	All Organisms → cellular organisms → Eukaryota → Sar	504	Open in IMG/M
Ga0103765_1024610	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Gnathifera → Rotifera → Eurotatoria → Monogononta → Pseudotrocha → Ploima → Brachionidae → Brachionus	501	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0103765_1004753	Ga0103765_10047532	F061886	MHYLSSAPETSASDNLDRGKFRDHYTNEYVWVEKNHITDVGVKYDGLSRKVDHKPSHWRCEDEIERGKEYKRMNDECADKIADNRYSIAHSRDWLVDDGGVVDRIHRMSAKTLKTRYDLDSIRRNMDNLKAMRTRLLKQ*
Ga0103765_1005316	Ga0103765_10053161	F061886	MHYVAHNPDGLSSEVIDRSKFRDHYTNEYVWVERNHITDVGVKYDGLSRKVDHKPSHWRCEDEIERGKEYKRMNDECADKIADNRYSIDNSRDWLVDDGGVVDRVHRMSAKTLKTRYDLDAIKRNMENLKSMRTRLLKN*
Ga0103765_1005871	Ga0103765_10058712	F031523	MRKRIHEGMANYLQNKTEDEINTYIKTKVPEIGARVIKHFTDKYVSARDEVERDVQNMKAFYRSQKDIPGKTKADVLKEIWAELPKYSDKPVPPLDEEMLAELAEEPATAEGEFKHSWGTADVLYKSEAIDAFGMKYLLGVFETKAEAQKAFADWNSEYEKARVEMKAEMEQWTKQEQARLDRDTSGQDRIKKVLEEARR*
Ga0103765_1005876	Ga0103765_10058761	F000023	YDVGELKDLLANNKGEVNHVRRIVLACERDMEDFTAAMDAVNVDLDEMRARVDATHSIITSRQRVEATMTAEISTMRLDIGDIQEALKNHDSWMEDVSNTLQQMQEKEENLTEDIINLKNEMNTKLDTKVDNVAWKEANDDLDAAIKTVRDMVSSLRLDVDARRRKVDEILATIRHDITAVETNLEESKAKITSDTDQAVNALNGRIDFTNKDLAATQESLHTTQNSLSDCFNEVAVVRSDLERNVADTEARLKNDIRQKQQEAFEKIGAVEQQAELRSAEASRRLGALDLRMSGVQGGLGEHKRDILKLREEVNGLTVKSASHEVDIQKNSDVARKMEKQRNMDEQNWKAQMDAVHDVLDTK
Ga0103765_1008488	Ga0103765_10084882	F041782	NKHHNSTFDLLNHCEFGWDPAEWLYFFQEWTMKWYGWLTVPLIPLWHFVGANDTGCLFACLWCCRFPDAGAGGKCDKQFYKKWLPVRVKHMCFLGCLWGSVWLLGSLGMGRPLSDGWKFVGMVSIFARVGFSAAWMFIANFNHSHLWNEFLAHDPDRTWPKLHRTMAFLLGGRHRWNEMLFHDVHHMCPGRIGAMSQRGRFHGWEKVHDACVEILSRGLWKSDDAETKMDKYQKRRSMLVKSRKNSAAKH*
Ga0103765_1009238	Ga0103765_10092381	F000241	RLANFDLPPQVVRMTRRTLLPVVFAGAAVTYVFSTTMSFVGSFRPAHCRGDLVPARVSAEYLERCGPKDSDVPFQSSAVTGPGADVTFKKRPFGILRYQPGQGGKGAMAMEIIPTSRYPGDPQGQAFSSGVKSGWVVKSINGVNVLNEDFGKIMDLLDDEVADPRFSKSTALALEKQGGRLAPAADTPLSISFASIPGYVYKGKELRQDGQDGFH*
Ga0103765_1010096	Ga0103765_10100961	F000241	QLATSGAEPKTANMTRRTLLPLVFAGAAVTYVFSSTMSFVGSFRPSTCRGDLVPARVSAEYLERCGPKDSDVPFDSSAATGPGADVTFKKRPFGILRYQPGNGGKGAMAMEIIPTSRYPGDPQGQAMVAGVKSGWVLKSINGVNVLTESFGKIMDMLDDEVADPRFSKSTALALEKQGGRLAPAADTPLSISYASIPGYVYKGKELKQDGQDGFAR*
Ga0103765_1010940	Ga0103765_10109401	F070863	AALFTVAKIMGSSKAGGNSSNMVLGVLMCLASLLCGSLNLALAGVLGEMKLSVYDTVAYMSVPAFLFLVPFSLFLVKPVPGQWPEVLGYSRATDWQILMKVASIAPSTFSLLLLSGIFSYMYNILQFTIVHTLSPSATAFGGNFNKAALVFLTLILPFLQVHALPGPPYIIVIWVAVIGNVAAFSGYSYIQIQDKLASNNAAEHKEDEKVALTTKAQGA*
Ga0103765_1011521	Ga0103765_10115212	F000306	RTVCTESIEEIPNEVCSFAYQQKEEDTTAKTVEVTFVKEVKVQMVTVCQPGYGGYGGYGGYGASQQYCKEVAQETAFNVPVVTPVDVPVKVAYPEAIRTCVNKPIALPRVACENLTEKKCITVPEIENAVEAVEKCDTQLAAPACQKVELTLPKQVCIELVYGYAEDPAPAYAPAPAYAPAPAYAPVA*
Ga0103765_1013496	Ga0103765_10134961	F003249	QAVWLANYSTQRSLTTSVDTMTYGATSLLALSALVAAASGSLLRADRAAWEPESCEELAPGVPCRKLYEHPQGSTFVGPCPTESMANPEGCAAQFEGKPDAEQCPQIYCPKALGVTMKLICGGACCPTCWAPDHVVAMDRHTSLENPVTVPPAPQAPPTCAGARCFEPVCASGFEKGFVQGNCCYSCVPGR*
Ga0103765_1015190	Ga0103765_10151901	F016242	LQKALLRLEDFYKKNIGKKVVLAQQTPPVQFTIYKDNAGASPVMGLLEQIIEDSKKVEAEATAGEYKSQADYETFVKDSNALIAELTAAVEAKTKATATASGESAEAKGDLESAIGELDSLAAYQADLHGECDWVLKNFEIRQKARLQEMEAIQAAKAILSGAR*
Ga0103765_1015709	Ga0103765_10157091	F031766	HIVHIRIEDGSPEGLQIQVNRWMEAAEGDYINVKITMHKQPDQDGHCGNFNGDPADDDRLQVRARVGKTGVDVSELMFDTKTPVVEANRPNINDCPAQKLEEAKATCKERERKFIPSMACLIDVCFGGKGFADEK*
Ga0103765_1016202	Ga0103765_10162021	F025035	LTTDFNFAGQSGMSGQEEPVMLVVRHAAKKAAAAGEKIMHGDTVYIKVMTGRYVGEIDGTTKLEWVKARGTKKDKEHALTIEKIGNKEEPIQNGDTVMFVMPNGAHMDVCGSAVRARYYDPRGQWQKIVIVKQDGGEIYSGDKIFLRGHMGEYLDSNPLERAPDGEVKARWRDEGDWQIMYIEK*
Ga0103765_1016778	Ga0103765_10167781	F061886	MHFLATTEAPASDNLDRGRFRDHYTNDYVWIEKNHVNDVGVRYDGLSRKVDHKPSHWRCEDEIERGKEYKRMNDECADKIADNRYSIANSREWLVDQGGISDRVHLMSAKTLKTRYDLDSIKRNMDNLKAMRARLLKS*
Ga0103765_1017648	Ga0103765_10176481	F080070	DLTNHAGDAVTIVAQTIASLNQIIGAGKRDANQKDLISTIVTSLGLDSVWSTITALGSSVYLQFINIGTQLLFAGQQVWAQVKPVLAQLVSDLTNHAGDAVTIVAQTIASLNQIIGAGKRDANQKDLISTIVSSLGLGSVWSTITALGSSVSSQFIQIGTQLLFAGSQIWAQVKPVLAQLVSDLTNHAGDAVTIVAQTI
Ga0103765_1017752	Ga0103765_10177522	F040635	VRHEDIPEINNPKIRFPVLEGDKLMKEVLNGGYNVHPVPPPNSEIIERIKKRYETKRIKI
Ga0103765_1018562	Ga0103765_10185621	F015562	MQPTLSTVALLLGPICTAHAASFRAAAGYPVFSPGAGGTIETCGGITCKELDCKPPFVFKSPKETGTCCPLCLAESVKVPDDRSWANGLSGGVGMNNNADSVLCRGVMCPPTDCPEYDQHFDGRCCTKCKSSMMVTPADFAKEYEELP*
Ga0103765_1018611	Ga0103765_10186111	F005209	MAPSRATVLIFAVMAALLQPQLVTAVGRADAVRKMIAARNLEVAGLPDPTCATGVIAMKVGDTPQVCCAGYCGECSDYPTCMSVRGQNSTNACCKTQVYELRCGNAPANVCLKPCTESVPPCIMEDGKTFTTPDPSARTAGQDCNKAVADWRQKAVAATKPQQSK*
Ga0103765_1018849	Ga0103765_10188491	F016241	GEWKAQEGKNASEEGLGESWSPGGDKMWGDGAGTENVNPGNVGYYNSGFAAAHARCGDAGCALIVNPPGHRTVNHFHIHFVHYSSYGANLKKALESKVCRSGGWHGGGLPCGGKATCVDGFPGVMSTAIRGGSVHDASVIAWPGACGGRGTIVELAFGCSIEHQIRGDFDPRFR*
Ga0103765_1022684	Ga0103765_10226841	F004604	TMVRAEGTEVVKTAPDAAVDRLFEQVYMDYTSEYLKGPMYWHEDKLQGFLPDYPGTPMFKNGKMTSNATGNLKTFGSNELAFLSVLFLGIGLYGNLQFAYYDPQWPKIDAGLGFNPSYVVESFFLPISFFMHIAAYIQRMNGK*
Ga0103765_1022732	Ga0103765_10227321	F017489	LSLWACIWLLGTWPLGRPLSEGWRFMFTVSFFARLGFSAAWMFITNFTHSLPWNRFLANDPARTWPLLHDIMALVLGGKHRWNEMLFHDVHHAFPNAVGTLSQRGRFHGWKKVHDAAVDVLHNGLWLPNGDEETEMQKQQRKRSVLMKSSMNK*
Ga0103765_1022884	Ga0103765_10228841	F067773	VKMGTDEWKALANPDFKGTVGGNYDGALDTGHKEGMQTFGENYEGQQDENQYGVLALLEVIQSDFANLEADTAAAEVEAEKGYETFITESEKNKAVKEKNIEMSTADKATTEAKLQEDIADLKSTQDELLAADRYHEKLVPQCIDQGMTWDVRVKAREAEIASLKMALKILSS
Ga0103765_1023390	Ga0103765_10233901	F039474	QAFGYGDPCPPGAPGFGGEHQQAPPETVQNTVRYISENMTNPPKYKEIIEGFGYPGMKHSLAGGLLTIGRIYYGPGRYDYGRPKMPKGWIANFFYPAWEFLHILFVTDRYIMWRLIRNVGATLLCWIPLDMYYEYNKAYKKEYKAKYGSI*
Ga0103765_1024300	Ga0103765_10243001	F000592	MKAALIAAVAWLAVLAEAALQFRAGQPIYSGKVDSDANFAVSAQDGKPARMPGYRSAWDDCGGIGASATERMRTIAAKIKGWAKPLPFVRHAAQDCGSKDQTGTVPGPGERVNYPGPEIPRAAREGLEKAADTLAKYPAAAKKKAEYVGYLY
Ga0103765_1024610	Ga0103765_10246101	F080070	VLSQLKDDLINHTGDAVTIVAQTIATLNQIIGAGKRDANQKDLISTIVSSLGLDQVWATITSLGSAVYLQFIQIGTQLLFAGSQIWAQVTPVLNQLKDDLINHTGDAVTIVAQTIASLNQIIGGSGKRDLVSTIVSSLGLDQVWATITSLGSSVYLQFVQIGTQLL

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300008798: Planktonic communities from eutrophic pond at the campus Essen of the University Duisburg-Essen, Germany - sample KO-3

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences