NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Sample 3300008919

3300008919: Microbial communities of nutrient treated water from Blanes Bay, Barcelona, Spain - NA1



Overview

Basic Information
IMG/M Taxon OID3300008919 Open in IMG/M
GOLD Reference
(Study | Sequencing Project | Analysis Project)		Gs0117944 | Gp0126073 | Ga0103484
Sample NameMicrobial communities of nutrient treated water from Blanes Bay, Barcelona, Spain - NA1
Sequencing StatusPermanent Draft
Sequencing CenterSodertorn University
Published?N
Use PolicyOpen

Dataset Contents
Total Genome Size51765255
Sequencing Scaffolds21
Novel Protein Genes24
Associated Families22

Dataset Phylogeny
Taxonomy GroupsNumber of Scaffolds
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes1
Not Available8
All Organisms → cellular organisms → Eukaryota2
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium → Strombidium inclinatum4
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Urostylida → Pseudourostylidae → Pseudourostyla → Pseudourostyla cristata1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium → Strombidium rassoulzadegani1
All Organisms → cellular organisms → Bacteria1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
NameMicrobial Communities Of Nutrient Treated Water From Blanes Bay, Barcelona, Spain
TypeEnvironmental
TaxonomyEnvironmental → Aquatic → Freshwater → Unclassified → Unclassified → Bay Water → Microbial Communities Of Nutrient Treated Water From Blanes Bay, Barcelona, Spain

Alternative Ecosystem Assignments
Environment Ontology (ENVO)marine biome → bay → sea water
Earth Microbiome Project Ontology (EMPO)Free-living → Non-saline → Water (non-saline)

Location Information
LocationBarcelona, Spain
CoordinatesLat. (o)41.666Long. (o)2.8Alt. (m)N/ADepth (m)N/A
Location on Map
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Associated Families

FamilyCategoryNumber of Sequences3D Structure?
F000075Metagenome / Metatranscriptome2622Y
F000088Metagenome / Metatranscriptome2436Y
F000918Metagenome / Metatranscriptome834Y
F002691Metagenome / Metatranscriptome536Y
F002698Metagenome / Metatranscriptome536Y
F005505Metagenome / Metatranscriptome398Y
F015096Metagenome / Metatranscriptome257Y
F016139Metagenome / Metatranscriptome249Y
F019482Metagenome / Metatranscriptome229Y
F021302Metagenome / Metatranscriptome219Y
F026573Metagenome / Metatranscriptome197Y
F037737Metagenome / Metatranscriptome167N
F040128Metagenome / Metatranscriptome162Y
F058909Metagenome / Metatranscriptome134Y
F059656Metagenome / Metatranscriptome133N
F060358Metagenome / Metatranscriptome133N
F070259Metagenome / Metatranscriptome123Y
F076148Metagenome / Metatranscriptome118Y
F084728Metagenome / Metatranscriptome112Y
F097453Metagenome / Metatranscriptome104N
F101265Metagenome / Metatranscriptome102N
F103255Metagenome / Metatranscriptome101N

Associated Scaffolds

ScaffoldTaxonomyLengthIMG/M Link
Ga0103484_1000136All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes6638Open in IMG/M
Ga0103484_1001698Not Available1772Open in IMG/M
Ga0103484_1003352All Organisms → cellular organisms → Eukaryota1162Open in IMG/M
Ga0103484_1004627All Organisms → cellular organisms → Eukaryota962Open in IMG/M
Ga0103484_1005253Not Available890Open in IMG/M
Ga0103484_1005346Not Available881Open in IMG/M
Ga0103484_1005612All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium857Open in IMG/M
Ga0103484_1005728Not Available847Open in IMG/M
Ga0103484_1007412All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium → Strombidium inclinatum734Open in IMG/M
Ga0103484_1008764Not Available665Open in IMG/M
Ga0103484_1008999All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium655Open in IMG/M
Ga0103484_1009906All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium → Strombidium inclinatum619Open in IMG/M
Ga0103484_1010514Not Available598Open in IMG/M
Ga0103484_1010884Not Available586Open in IMG/M
Ga0103484_1011216All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Urostylida → Pseudourostylidae → Pseudourostyla → Pseudourostyla cristata576Open in IMG/M
Ga0103484_1012146All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium → Strombidium rassoulzadegani550Open in IMG/M
Ga0103484_1012172All Organisms → cellular organisms → Bacteria550Open in IMG/M
Ga0103484_1012216Not Available549Open in IMG/M
Ga0103484_1012298All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium → Strombidium inclinatum547Open in IMG/M
Ga0103484_1012477All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea542Open in IMG/M
Ga0103484_1014120All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium → Strombidium inclinatum506Open in IMG/M

Sequences

Scaffold IDProtein IDFamilySequence
Ga0103484_1000136Ga0103484_10001363F097453MYDLILRDVEEVFGASPWSSLNIKTYPVNYQGSKGSSTEYVLINVLPSSSRNYAYGVKKETTGLVAVKIFVKAGDGQGRLMAIANSLDTVLDNKTLSNGTKLGTSYLTVEGLDPANKSLYSASYIIPFTHYGE*
Ga0103484_1001698Ga0103484_10016984F060358EDLKTVITSVRLFIDNVLYDMKNVSKTTTKPVILAHIDAWKNELETIKQFTNT*
Ga0103484_1003352Ga0103484_10033522F070259MKLESLVIVNQHVTVNDLSNFAHTAHHARKVVPAGHLLGALYAI*
Ga0103484_1004627Ga0103484_10046272F070259MKLESLVIVNQHVTVNDLSNFAHTAHHARKVVPAGHLLRD*
Ga0103484_1005253Ga0103484_10052531F015096MNTLTQWQSRRKELEDKYVELMLAKYPLLTDVTTDIQRKNGTRMFELNHKKYGPTRFATYKSGMVRKIIRTRFGELSCYQLNPQRINTRYYMTLSDNSELNVKSYEGKQRVGITNGLARLVYLEKYLIKNYDLDSVQDVIEVDGVLYKRI*
Ga0103484_1005346Ga0103484_10053461F059656MSTKIKVVNFIAAILLTLSCSSNHCKSTVCPENFTCEDGQCVCDEYHTGNDCETEIQETFYGTFTGIMNVYNEDFMLINSFQKSIIVKDSTNHPAIMSVDNIVAYVDSRTISFKFSSLNEDLNTDIQTEIRGYGGLDNDELDFNYTETTQSVGPNLFPVIYKHYHFIGMR*
Ga0103484_1005612Ga0103484_10056122F002698HALTGFINRVKLIDSFVYMKIKDGQIHSAVYLPQRDAVKSHSVACDKIFQVSNWPDTDAEMKVAFFEGNKVIEAIKHFESDAIKGELEFIEQEGELIASSLRMFNDELEITLACSEPSLGFKDLTPAQQAAIFAIDNTKFSFNIDTHTINKVKNLFGLDKEETFSVKANGKGVAVNGKSFNAVINPESNGEGAVTVYKKYLNLLDREEQKVHVTDSKIVFQSTESETLLTVSTCQTA*
Ga0103484_1005728Ga0103484_10057281F037737MDQELKKYKMSYRNPTQYIDRQSGQIEQNLQKTLAGIGTGIVTSINKIHADNAAKTAAIRAEADKRVADAQNSIMQTQSKNPTADFGDLDLQLDLMNKLLMKDPAKRTAEEKTFINSMENIGDNMANMLKNTAMSQEAMMEQVNKIPGTMGAIDPKANPEQYAKLSVLANQTEGKTKARYKVNKNGQIVFSLDV
Ga0103484_1007412Ga0103484_10074121F000088LLGYTEAATVAQKSSFAPPALGPYASDTDHLSAECYGGDEDDIMYDVFERYRVEERNPVGAGTGIWKLPKASGPQWAADIVRRFHVMDDDKVNSYVAANFDNFWKKYDNNGTGEIYESEGEVFMRALLGPNNRFRLAPGALSDMDSASLHVQNEFSATPDLLPYRHRYELALQNYPDGRTALQ*
Ga0103484_1008764Ga0103484_10087642F021302MRTLIQKFKKNRRKAKHVKFLHLKIAELHGEIIAESFKGEFQLNKGITIIHSNVENKAKLLKK
Ga0103484_1008999Ga0103484_10089991F076148TLTVAALLGLASYNEVNAITIFSNRGDKLYVEVSSSSDSSSSDDDAENIQLGDDEEVDHSNEFFLPGQHEMLGGGGYERVTPARFAADTDDIFMRSMIEQYALEQKNKDGTPSGKFWMDEAATRAAAREVLETNCGVKAAARDSWLNTYFGKAWNHFDVNRTGKVEVIKMPQLMRFLCSDQQMYLW*
Ga0103484_1009906Ga0103484_10099062F002691MRVSGFNGADEDEIMDNVFSRFSQEGRTPSGHKTGQKLLMKDDARLAAGTILEAAHKLSPADVPKYLNSNFESAWNHFDQNHEGWIRYEETHTFQRFIQSKLNKFNGAPGSITDLASGASAYALSYPAGSEQTPIRQV*
Ga0103484_1010514Ga0103484_10105141F103255MKSTADILQELSMYANLNHEDDWYLKDKINELKTRI
Ga0103484_1010514Ga0103484_10105143F058909MKLTNTEENVLLVALDHMEEHIMELMEERELRGDMWKERLDACKTIRTKIKK*
Ga0103484_1010884Ga0103484_10108841F026573KGKPFVSEFIASTQGLLEIPLWYHYRVVSRYWLSLMGCFLFSVYMDNFVPSCAITGVFLINTRIGPDVMAMIQGLLAVVVGIVVNALMYSFSCRFGNTSVLQVVAVIYWLCTLTVGKGSSSLAGMGLLMAALSPFALYKFCTPDTPAAQAGMAIGLWGGIRALLIAVVITVIMEFLHVPGLFTKLSRDALQAGFE
Ga0103484_1011216Ga0103484_10112161F005505VKYFFFER*NISELDEVRFYGVAPH*YFRPLMGILVISPTHYEGLM*MGLFFILLAFLPIFYNFYNVYHKYVATIPMQNSLLQTSFFIFFMMSLYCTASMLPCGRYYYEPEGGYVGNP*VKFSYQFVYLYLG*FVHHLDLFDHYIFQFSQTFIRKCSSYSLRTLVLRKAASKKTSSRKAFAK**
Ga0103484_1012146Ga0103484_10121461F040128LLGMTQAVSIKQLETPAPCEEPLEVSQEELEIQLDYFSRRLDMKYYENAMKIYGELLKQGKNPTLQIHTFELYDKAFSFPRVRRYDQVNQILNDIQHYQDNLNQNFTNALHVRNFLATAKKAQKELNTKYHDGEFSDPASFDPLEDHPVTWSNVKL*
Ga0103484_1012172Ga0103484_10121721F000918MYKSRTQCWNEVMQSFKENERRTAICQKMYGQDNLIGLTEKQKEAYWNAV*
Ga0103484_1012216Ga0103484_10122162F101265LATELRLKRNYHCRITDVGEDYDLRVIISKSIGGYFVKTSSSEIAETN*
Ga0103484_1012298Ga0103484_10122981F016139VCSFLTHTSDIDDLLEGLDGVLEDWLDGLHDTESSLHIVDLWLHTLDGLHLSGDLNEWLSVIESLEDSGGKGLLDVLDGSGLGNGGITVSSGLSGESHVELGLEGDKELVLVHVLVSLHGLEELSIVMVVVSGGDGGNEKAE
Ga0103484_1012477Ga0103484_10124771F084728FKEIRAETITVAATNNRGDSKKAKLFITLSRSEDFFENMKKFNDIREENERAASKIQEDARDSKNN*
Ga0103484_1013444Ga0103484_10134441F000075FKMKFVACAFVATAAANQYDFMGEDELLAQLSSTLISAQRSEAMGDGDAAVAKTAAIKNIQKSLTARILKRLDDGQPLVEVARKMKAIEGMQPQINDMERRLGIMQSVEPVLENAIKTLQKVVDVRGMGKK*
Ga0103484_1014120Ga0103484_10141201F019482VCSFLTHTSDIDDLLEGLDGVLEDWLDGLHDTESSLHIVDLWLHTLDGLHLSGDLNEWLSVIESLEDSGGQGLLDVLDGSGLGNSGVSVTSGLGLESGGEGVGERDEEFVFGHVVVLGGSDGGGESKG
Ga0103484_1014291Ga0103484_10142911F000075ALVLAAAVAANKYDHMNEDELLAQLASTLSSAQMSEARGDGDAAVAKTAAIKNIQKSLTARILKRLDDGQPLVEVARKMKAIEGMQPQINDMERRLGIMQSVEPVLENAIKTLQKVVDVRGMGKK*
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