Sample 3300009542

Overview

Basic Information
IMG/M Taxon OID	3300009542 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0118679 \| Gp0138711 \| Ga0116234
Sample Name	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R2_A SIP RNA (Metagenome Metatranscriptome)
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	211437865
Sequencing Scaffolds	54
Novel Protein Genes	59
Associated Families	43

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → unclassified Methanothrix → Methanosaeta sp. PtaU1.Bin028	2
All Organisms → cellular organisms → Bacteria	4
Not Available	23
All Organisms → cellular organisms → Bacteria → Terrabacteria group	1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium ADurb.BinA104	1
All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → unclassified Methanothrix → Methanosaeta sp. PtaU1.Bin112	1
All Organisms → cellular organisms → Archaea → Euryarchaeota	2
All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon ADurb.Bin009	1
All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → unclassified Methanothrix → Methanosaeta sp. PtaU1.Bin060	4
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → unclassified Syntrophomonadaceae → Syntrophomonadaceae bacterium	1
All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	3
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Smithella → unclassified Smithella → Smithella sp.	2
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	1
All Organisms → cellular organisms → Bacteria → Synergistetes → unclassified Synergistota → Synergistetes bacterium ADurb.BinA166	1
All Organisms → Viruses → Predicted Viral	2
All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → unclassified Methanothrix → Methanothrix sp.	1
All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Hydrogenedentes → unclassified Candidatus Hydrogenedentes → Candidatus Hydrogenedentes bacterium ADurb.Bin101	1
All Organisms → cellular organisms → Bacteria → Thermotogae → Thermotogae	1
All Organisms → cellular organisms → Bacteria → Thermotogae → Thermotogae → Thermotogales → Thermotogaceae → unclassified Thermotogaceae → Thermotogaceae bacterium	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_60_22	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Anaerobic Biogas Reactor Microbial Communites From Washington, Usa
Type	Engineered
Taxonomy	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified → Anaerobic Biogas Reactor → Anaerobic Biogas Reactor Microbial Communites From Washington, Usa

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	Unclassified
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Surface (non-saline)

Location Information
Location	USA: Washington
Coordinates	Lat. (^o)	47.6525	Long. (^o)	-122.3049	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Family	Category	Number of Sequences	3D Structure?
F003987	Metagenome / Metatranscriptome	458	Y
F004383	Metagenome / Metatranscriptome	440	Y
F005744	Metagenome / Metatranscriptome	391	Y
F011196	Metagenome / Metatranscriptome	294	Y
F029285	Metagenome / Metatranscriptome	189	Y
F029455	Metagenome / Metatranscriptome	188	Y
F035785	Metagenome / Metatranscriptome	171	Y
F036251	Metagenome / Metatranscriptome	170	Y
F040648	Metagenome / Metatranscriptome	161	Y
F042353	Metagenome / Metatranscriptome	158	Y
F042860	Metagenome / Metatranscriptome	157	Y
F047698	Metagenome / Metatranscriptome	149	N
F048390	Metagenome / Metatranscriptome	148	Y
F051061	Metagenome / Metatranscriptome	144	N
F051165	Metagenome / Metatranscriptome	144	Y
F051949	Metagenome / Metatranscriptome	143	N
F051952	Metatranscriptome	143	N
F054063	Metagenome / Metatranscriptome	140	N
F057301	Metagenome / Metatranscriptome	136	N
F064744	Metagenome / Metatranscriptome	128	Y
F064746	Metagenome / Metatranscriptome	128	N
F066219	Metagenome / Metatranscriptome	127	Y
F072820	Metagenome / Metatranscriptome	121	Y
F074913	Metagenome / Metatranscriptome	119	Y
F075034	Metagenome / Metatranscriptome	119	Y
F076128	Metagenome / Metatranscriptome	118	N
F083876	Metagenome / Metatranscriptome	112	Y
F085858	Metagenome / Metatranscriptome	111	Y
F088942	Metagenome / Metatranscriptome	109	Y
F089495	Metagenome / Metatranscriptome	109	N
F090057	Metagenome / Metatranscriptome	108	Y
F091989	Metagenome / Metatranscriptome	107	Y
F092294	Metagenome / Metatranscriptome	107	N
F093911	Metagenome / Metatranscriptome	106	N
F094051	Metagenome / Metatranscriptome	106	N
F095525	Metagenome / Metatranscriptome	105	Y
F097599	Metagenome / Metatranscriptome	104	N
F099496	Metagenome / Metatranscriptome	103	Y
F101223	Metagenome / Metatranscriptome	102	N
F103105	Metagenome / Metatranscriptome	101	Y
F103319	Metagenome / Metatranscriptome	101	N
F103320	Metagenome / Metatranscriptome	101	N
F103505	Metagenome / Metatranscriptome	101	Y

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
Ga0116234_1003323	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → unclassified Methanothrix → Methanosaeta sp. PtaU1.Bin028	504	Open in IMG/M
Ga0116234_1005467	All Organisms → cellular organisms → Bacteria	4702	Open in IMG/M
Ga0116234_1008368	Not Available	508	Open in IMG/M
Ga0116234_1015642	Not Available	514	Open in IMG/M
Ga0116234_1015678	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1211	Open in IMG/M
Ga0116234_1015923	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium ADurb.BinA104	2699	Open in IMG/M
Ga0116234_1016119	Not Available	2808	Open in IMG/M
Ga0116234_1019364	Not Available	1050	Open in IMG/M
Ga0116234_1033109	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → unclassified Methanothrix → Methanosaeta sp. PtaU1.Bin112	2245	Open in IMG/M
Ga0116234_1033624	Not Available	2445	Open in IMG/M
Ga0116234_1037657	All Organisms → cellular organisms → Archaea → Euryarchaeota	1271	Open in IMG/M
Ga0116234_1042536	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon ADurb.Bin009	914	Open in IMG/M
Ga0116234_1047091	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → unclassified Methanothrix → Methanosaeta sp. PtaU1.Bin060	973	Open in IMG/M
Ga0116234_1049373	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → unclassified Syntrophomonadaceae → Syntrophomonadaceae bacterium	1297	Open in IMG/M
Ga0116234_1061193	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	1997	Open in IMG/M
Ga0116234_1062200	Not Available	590	Open in IMG/M
Ga0116234_1063480	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Smithella → unclassified Smithella → Smithella sp.	611	Open in IMG/M
Ga0116234_1063605	Not Available	971	Open in IMG/M
Ga0116234_1068758	Not Available	1218	Open in IMG/M
Ga0116234_1070194	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	3738	Open in IMG/M
Ga0116234_1070298	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → unclassified Methanothrix → Methanosaeta sp. PtaU1.Bin060	1362	Open in IMG/M
Ga0116234_1071660	Not Available	1105	Open in IMG/M
Ga0116234_1076829	All Organisms → cellular organisms → Bacteria → Synergistetes → unclassified Synergistota → Synergistetes bacterium ADurb.BinA166	679	Open in IMG/M
Ga0116234_1082093	All Organisms → Viruses → Predicted Viral	1102	Open in IMG/M
Ga0116234_1086741	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → unclassified Methanothrix → Methanothrix sp.	7647	Open in IMG/M
Ga0116234_1087840	All Organisms → cellular organisms → Archaea → Euryarchaeota	1076	Open in IMG/M
Ga0116234_1095851	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → unclassified Methanothrix → Methanosaeta sp. PtaU1.Bin060	3519	Open in IMG/M
Ga0116234_1098886	All Organisms → cellular organisms → Bacteria	4942	Open in IMG/M
Ga0116234_1102675	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	615	Open in IMG/M
Ga0116234_1105300	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Hydrogenedentes → unclassified Candidatus Hydrogenedentes → Candidatus Hydrogenedentes bacterium ADurb.Bin101	681	Open in IMG/M
Ga0116234_1115627	Not Available	1310	Open in IMG/M
Ga0116234_1116754	Not Available	1240	Open in IMG/M
Ga0116234_1117813	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → unclassified Methanothrix → Methanosaeta sp. PtaU1.Bin028	3257	Open in IMG/M
Ga0116234_1118510	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → unclassified Methanothrix → Methanosaeta sp. PtaU1.Bin060	732	Open in IMG/M
Ga0116234_1121432	All Organisms → cellular organisms → Bacteria → Thermotogae → Thermotogae	10565	Open in IMG/M
Ga0116234_1133551	Not Available	707	Open in IMG/M
Ga0116234_1147555	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	566	Open in IMG/M
Ga0116234_1165198	All Organisms → cellular organisms → Bacteria	840	Open in IMG/M
Ga0116234_1165302	All Organisms → cellular organisms → Bacteria → Thermotogae → Thermotogae → Thermotogales → Thermotogaceae → unclassified Thermotogaceae → Thermotogaceae bacterium	9392	Open in IMG/M
Ga0116234_1169611	All Organisms → Viruses → Predicted Viral	1966	Open in IMG/M
Ga0116234_1170286	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Smithella → unclassified Smithella → Smithella sp.	937	Open in IMG/M
Ga0116234_1177846	Not Available	1013	Open in IMG/M
Ga0116234_1180442	All Organisms → cellular organisms → Bacteria	2292	Open in IMG/M
Ga0116234_1189088	Not Available	2236	Open in IMG/M
Ga0116234_1193150	Not Available	838	Open in IMG/M
Ga0116234_1193591	Not Available	838	Open in IMG/M
Ga0116234_1215053	Not Available	797	Open in IMG/M
Ga0116234_1234544	Not Available	540	Open in IMG/M
Ga0116234_1239481	Not Available	588	Open in IMG/M
Ga0116234_1245533	Not Available	672	Open in IMG/M
Ga0116234_1247418	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_60_22	1043	Open in IMG/M
Ga0116234_1249630	Not Available	1097	Open in IMG/M
Ga0116234_1274897	Not Available	544	Open in IMG/M
Ga0116234_1277105	Not Available	992	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0116234_1003323	Ga0116234_10033231	F051165	MTTSFQKALAIMASVASVLAGVVTIASYLSGEDAALPPSSATAPSESRPIIIQARAVFVDDDKVYILDYDNNLIEWNESLDVEVL*
Ga0116234_1005467	Ga0116234_100546711	F072820	MKPLHQVIDDAITIRGIIDYLEKSVEPVGLHELAMTQHISNGTALRLCRILEKASIAEHPVVTRIVMGASQEVPQLAWRLTKSFRLGGCVYDAERLAGGI*
Ga0116234_1006539	Ga0116234_10065392	F099496	MIKEEEKMEQDIKEQVKKACDKICSCIYEETKGSIRVYPYTQIISSRLIVAVETIKEEYAGVIDYYIGYDGLRREIFILILSLLV*
Ga0116234_1008368	Ga0116234_10083682	F047698	MQQATAIVGVLIGFLILTQIGIFVCDAMIEASSVNESSQLYDAQTEAINTFVQCLSIVRILLIVAIVAVVFQ
Ga0116234_1015642	Ga0116234_10156421	F057301	EMHDSVPGMPNPFGAPKDNDDEFSVNLSEAPTGGGYLIPDGDYPALLVDLRKGFSKNGNPQWIWTFAIMSGEHAGKEFSLFTALTPSALWKVAETVEALGLGKGGTVSKFIKNEALSRRCIISIRKETYNGQERSSIAKVLPHPDGPGPVTGFNPK*
Ga0116234_1015678	Ga0116234_10156781	F103505	AHPKGGHMDPALLREYEAKLAYWLSQGYRLLADDIDGELRITAHFVSRDGAVGSERAQEYWPMTAGIVQLLTDNGIEISRALAGPRPWAGPHPEDL*
Ga0116234_1015923	Ga0116234_10159237	F103320	MATDNIHIAGVKAIYMTDVKDTPMAVNKFYPSLKVKNPAGDTITVNPVAAAFNERFRENESYPAFILKDPKSGRIDTLTWDVLDWDDTSVALYLGSGTGTKADVWMAPTDSYVAEKTVRIDFLTGWTWYFPRLKIAAAPGGDGSAAGSVNLQVVAKVQPLGELEPFQRIATPVLASEPQP
Ga0116234_1016119	Ga0116234_10161195	F103105	MRQKKEKRAMIPSPYDSWPVVMSLNKAAQLLGVDRKTLAKNKELLDRCSEVIGDKPKVIRDRLLRELKLI*
Ga0116234_1019364	Ga0116234_10193642	F103320	MAATDNIHIAGVKAIYVTDVEDTPMAVNAFYPSLKVKNPAGDTITVNPVAAAFNERFRENESYPAFILKDPKSGRIDTLTWDVLDWDDDSVALYLGSGTNTTTDTWMAPTDSYVAEKTVRIDFLTGWTWYFPRLKIAAAPGGDGSAAGSINLQVVAKVQPLGELEPFQRIATPVLASEPD
Ga0116234_1033109	Ga0116234_10331092	F103319	MADQYNSIGHHPKSTYMTSEGHALHNISGLDLIIDIAGVYFPLRSINYAANHNVTDEHGTGTHDPVALTNQEHTYTGTFTYASFLVTGENVLTQKDVLTLTQLLQDQADEGVSKYFDIYIIEVQGKRTPGTGTTFEEQVEAALQNESMVGYINALVDCKVTKVNRDIPEKNTVVSSRDFKFSYMLPR*
Ga0116234_1033624	Ga0116234_10336243	F083876	MKEHSHLQLGWYTLGVIQKEGSKWIVKDLLVRWNEQTEERDMDGETVTEYVYDAHRFDFELPPEVQPGLEAVEFYLEAAQAAVLQLAQDLAAQEAGFQ*
Ga0116234_1037657	Ga0116234_10376573	F054063	MTVDRKLRFTQVIMNAWLYGVESTANVFFDRPKLFYRKWGTIAIRPFIESWGELGMEFQKGLSPYNTVKMFIDALVTAQFFNPDDFEFAGDDKNFTFKAIQCPYKFHCKKLIGEQKEIACLRAITLLGALDYNFEGESLKYKYNFEFNENAPCLVSFERFKD*
Ga0116234_1042536	Ga0116234_10425361	F094051	NWTQKRLILPVIQAALERTSLASPAIGPTMTYAKLKGTIPLLGPVPVQSQLDEFEHAVGGGGKPSGFDIEVLKDRVVLYVSDEAEIESDVGNPMSLQQQAAAGALAANLNKLIAERLNTTPQVYGTGGDLGNWTSVKPTLAVGKMAAAMGVHRPTALVMGTLAGAYYVDAVGDKVAIANLAEWRGATSIHPTLNIPVFISTDVDKLDDTSGNRYVFGVCNTTPGVVTVLSKIKARQYDDPKLGAQVYQYDIWRSPFSNIQQTSGKNLGVMRGYMTES*
Ga0116234_1047091	Ga0116234_10470913	F083876	MKERSNIQQPWHGVVNIERDGSRYVVRDLLVRWNEQTEEKETEDGTETEYVYDAHRFDFELPPEVQPGIEAVEFYLEAAQTAVLQLAQDLEAQEAGFQ*
Ga0116234_1049373	Ga0116234_10493734	F088942	MWFRKDNTEGFDEKTLKVMNEEMQKLYNSLSEEEKGNESYIDYLKEQILSSH*
Ga0116234_1061193	Ga0116234_10611934	F051949	MFAHAGTARLDIFTDSLLLEVGEDLFLARLSRLSPLMQSRTAYCPLSRRYQGTAGHYCDVEQGIGLRRSKPGAALIFVDQGTIYSIPVVELREVLHGVRSECGISRVLTTEARMMEVEA*
Ga0116234_1062200	Ga0116234_10622001	F051952	PDHFTSTALSENSWRILGKVTENEVTLVRYFLSKIVYTDEVVTLEETCILFLSFEKMVQKMSQHKAYQAKYGSEVFTFRSIFTSLEDVVSANPQGRLIRMREVFGFYRGKLFSRRYYFSVRGQLTRELHLKVLTRFPKKFPPKAFVGKGYGDHGTAKEMAYDGSPSWQEVAMADTNLGTSDTSRFDYLEFLFRNFN
Ga0116234_1063480	Ga0116234_10634802	F029455	MPDRIIDLDLWGEGAERLPAITVTGQGLRLEGSTAEFDRLLLILGGWLKS*
Ga0116234_1063605	Ga0116234_10636053	F005744	MDEMFEIIKAGAPDAPPEQALYRIQQTYPDGSGGRLNIDWEGLLRLHELIHDRIALEGCVCETCDTKGCHRPATWEIECRGVGVSGRLIYSCDEHCPDPAILSPYDDIRRVV*
Ga0116234_1068758	Ga0116234_10687581	F048390	LQHRVTPHGRDFYALSIPPQVAEALNLKAGGSVDIIVSPVKKSMFEVTLKPTPVELSQSLKEV*
Ga0116234_1070194	Ga0116234_10701947	F042860	MTREEILKRIEIEDARIASADRNIEGLIAQKTRSQLEQARLRSLLEALSEEPVTEPLE*
Ga0116234_1070298	Ga0116234_10702982	F076128	MLIEIIVLLFFLAASLYLAYQFRSCGHQMGILQGSNASLSADLEKTREENAKLMSELQKTQADLALTRGELEKTRAALNSCTDAINGGS*
Ga0116234_1071660	Ga0116234_10716603	F088942	MEWFRKDNTEGFDENTLKVMNEEMQKQYDSLSDEEKNNESYIDHLMEEILSKY*
Ga0116234_1071660	Ga0116234_10716604	F099496	MEQVIKEQVKNVCDKICGCIYEETKGSIRVYPYTQIVSSRLIVAVDTIKEEYAGMIDYYIGYDGLRREIFILILSI*
Ga0116234_1076829	Ga0116234_10768291	F003987	MIPALPCGSFPDGDTPAGAFYVAAFEEGDTPHHVGEYRIETVIQALRALQACGYDDVEIGSIERGGKTHLLLIGLDGEARFGDRQTGCVAVAPV
Ga0116234_1076829	Ga0116234_10768292	F004383	ERAFMARIRADEYREALAALQREFDERPDVIEIKRLIDRCEEERRTCIEQAKAAGISKQGSFLLKIRTRKARTVIPKLFFAKHGAEAFVECATIAIGKAETLLGKAALDDCCEVEVKEIGVSVEYVRSEGSE*
Ga0116234_1082093	Ga0116234_10820931	F097599	MPDDETKGLLKTIADALTRREPAPVQHVNLTEFENLKKELETAKAQTAELVNLKQEIATLKAEKATAEKDAKWNAMKANLPEGWLGAKEPETRKEFEADPGAFALKVVAFKNTQPQEQKAEGAGVAGGSGDMGSTEEQKFANMAAEVAKATGIQFV*
Ga0116234_1086741	Ga0116234_108674113	F091989	ARDIINRARVNCYATDASKASDALIRPFGEIDEQRARLKLLQESTRALCWIDATGGAVPFDEAEFNQVQREIANLQAKIDHNDDILDALDAKVAELGLAEFSLAKIKSQKEKLRGQIAQIRSEESDALRHKWESVVSLGGNRATYDKLPEVIEARAKAAAQIEPLEAEIKALNGQIRSLESILSKFKR*
Ga0116234_1086741	Ga0116234_10867413	F064746	MNKIIWMALILLLGVFAIGGMSGTSGNDDAKNVTIDGYTFEGDFDNKWISGYGDTKTYKPANLEDQFGIPIGAYDWTGTENYNAFYYDSGEPSGSITKYGWAHIFVLKPDEDMANVLKSATRLLINPRNHRNAVVAGDLTEKYIEYNGRQAYLVEIKEELMDGFVDYRDYAAIAFFLDDGKVCVIDAFTTDNFGMSAWDIIDSIEL*
Ga0116234_1087840	Ga0116234_10878401	F054063	MDINVKLKYTSTIMNAWLYGVENTANIFFDKPKLFYRRWGTIAIKPFIESWKDLGMEFQKGLSPYNTAKMFIEALVKAEFFNSADFEMAGDDNNFTFKAINCPYKSHCTRLIDEGKEIACLRAITLLGAMEFNKEGESLKYMYKFEFNKETPCLVSFEKFKD*
Ga0116234_1095851	Ga0116234_10958513	F076128	MLVEIIVLLFFLVASLYLAYQFRSCGHQMGILQGSNASLSADLQETRSCLYNTREENLKLMDELEATRADLALTRGELEKTRAALNSCTDAINGGS*
Ga0116234_1098886	Ga0116234_10988863	F051165	MTTSFQKTLTILASIASVLAGVVTIASFLSGEDVTLPPSLTTPSSDHQPIIIHARAVFIEKNMTYAIDYDKNLIMLNESTIVL*
Ga0116234_1102675	Ga0116234_11026751	F092294	EKSNAFENLHDVTLQRLDVYHRNNGGYVFYDSKHFAPTVDHWNSVPVIYVETEPGKPAEHPQFKDVITRTLPAKFRTVGSVSAAHLTETGEKVLKGAIAFSDPAIAAKANAGELSLSTGLASPEAPDPRLPGATRIAGPVTPNHVLVFDRGACPNCYPNDSGAMFHNLQEPDMPDDETKGLLKRIADALTKTPEPVQHANMTEFE
Ga0116234_1105300	Ga0116234_11053003	F042353	METRTPPTTLPGDACRRLERIIRDDLEHATVSSAMVLVEEGGRIVINELVLRLEDGRMVTLMPLDVSAETAVDLRLDIYDDHLPGGHGWREATVAEDYAEELADAVEGAGLGATPSPADMQGRAPTSTT
Ga0116234_1115627	Ga0116234_11156274	F035785	VMIRIEAENALKMTETEMLDVVFEASENSVVELNVVDPDSQAGDNDGVYLEVVKLDDEESVVRDRWPNQDGDRHIVSTDDIYSIYRALVDQVEEVA*
Ga0116234_1116754	Ga0116234_11167543	F047698	VVQMQQATAIVGVLIGFLILTQIGIFVCDAMIGASSVNNTSDLYEAQETAIDTFVQCLSIVRILLIVAIVAVVFQYLQGAGLIPGFGGRQGGY*
Ga0116234_1117813	Ga0116234_11178132	F051165	MTTSFQKALAIMASVASVLAGVVTIASYLSGEDVTLPPPLVTSSSDRQPIIIQARAVFLDNDKIYILDYDNNLIEWNESLEVEVL*
Ga0116234_1118510	Ga0116234_11185101	F083876	YTLGVIQKAGSKWIVKDLLVRWNEQTEERDMDGGETVTEYVYDAHRFDFELPPEVQPGIEAVEFYLEAAQAAVLQLAQDLAAQEAGFQ*
Ga0116234_1121432	Ga0116234_11214325	F066219	MKKVFLVFLILCIGCLIHANIVEFFEEIPPVVKYAVGTVITIYGLSWAYSWFFDPIIVVADTTYGAFNFGPFIVVSPYFWYDASESSRNTVINHEYVHYVQHAIYGPILSLTYPICSWYSTIKTGNQWDANYWELQAIELSDISSPAWEPSFVIELE*
Ga0116234_1133551	Ga0116234_11335511	F095525	MKPVTAIWLVALGLVVGVVIGQLLQYHQINLLETIKKIFKR
Ga0116234_1147555	Ga0116234_11475551	F092294	KSNAFENLHDVTLQRLDVYHRNNGGYVFYDAKHFAPTVDHWNTVPVIYVETEPGKPAEHPQFEDIANDTLPPKFHKVGSVSAVHLTESGEKALKGAIAFSDPAIEAKAAAGELSLSTGLASPEAPDPRLPGATKIAGPVTPNHVLVFDRGACPNCYPNDSGAMFHNLQEPDMPDDETKGLLKTIADAL
Ga0116234_1165198	Ga0116234_11651981	F074913	RSAVCACCRSIAVARVFALEVRYRVMMLFVYYRVGKNRDTSRGTPAGAGAGRGASHKTASLVTQLSRHGAAIAYTDLLANVTGLFSVN*
Ga0116234_1165302	Ga0116234_11653029	F089495	MGRPYLRKKHVTISLFDGTAPTPFTETITGYADVPELPEPVIDAPAEGYAPQGVFNSIEEGDDTINLPEFSIAVDINDADVTSNKYALNEWFNNHKDSTGSTALKSTNDGSAYLKKSIDGTTVSANLATDWFTIGMKVLFNNSGSAKAFGKQYKYVRPISATFSTSNKAQVTLRMQIVGAPTDITS*
Ga0116234_1169611	Ga0116234_11696112	F093911	MRLYDAYKNSEITRTEYLAYLDFGYKPNDSVFLTQNRSTEMVTISYLSMGSNYNWSIDDGESMMAYVGPINDLSNAGSLNNAGSILFLYKDGKIVNTGTITNTGNITLKSI*
Ga0116234_1170286	Ga0116234_11702861	F029455	MPDGIIDLDLWEDGNADQLPAITVTGQGLRLEGSTAEFDRLLLILGGWLRP*
Ga0116234_1177846	Ga0116234_11778462	F029285	MKNKADYSKYECPYSHLEKESGHELHGPEGYEDCYGVWCACGFRAPVFYLEPDELGLKLKKERM*
Ga0116234_1180442	Ga0116234_11804424	F064744	MPTIDGAYQLLLARLLAIEADMADLRERMDELDDELHEAWLGGNE*
Ga0116234_1189088	Ga0116234_11890883	F072820	MKPLHQVIEDAVIIRGIIDYLEKSVEPVSLHELAMTQHISNSTALRLCRILDKAAIIEHPTVTRIVMGASQEVPQLAWQLTKSFWLGGCVYNAEDLARGAA*
Ga0116234_1193150	Ga0116234_11931502	F101223	MTEVTQEDLETLKSELNEIIETRLDSFINEFVATWNELENKESEGENCCSCESENADTENPAKYIIFAGGNKFLATDIKPNAMVGIDFYLHEVDPVTGKEYNSQGTITNADVVVLDLQPEMDLETFSSIKRNTLDYVIKQAQEAQAKEKAMKAENSKTHPDVSHISYG*
Ga0116234_1193591	Ga0116234_11935912	F101223	MTEVTQEDLETLKSELNKIIETRLDSFIDEFVATWNELENKESEGENCCSCESENADTENPAKYIIFAGGNKFFATDIKPNAMVGIDFYLHEVDPVTGKEYNSQGTITNADVVVLDLQPEMDLETFSSIKRNTLDYVIKQAQEAQAKEKAMKAENSKTHPDVSHISYG*
Ga0116234_1195080	Ga0116234_11950802	F090057	MAVFTHIETDTGTNADISSATAIGAYTATADKLVMVDVSIDQVAGDGDYVMYVTRQINGAGSAYRLLPQTTL
Ga0116234_1215053	Ga0116234_12150532	F075034	MIACRSCGAPTASSDGICRDCADAMRSERSEALSALCRVHRVRYVEDLPVSVLEEMQVEWGRC*
Ga0116234_1234544	Ga0116234_12345442	F047698	LQQATAIVGVLIGFLILTQIGLFVCDAMIGAASIDNESQLHEAQTEAIDTFVQCLSIVRILLIVAIVAVVFQYLQGAGLIPGFGGQRQY*
Ga0116234_1239481	Ga0116234_12394811	F036251	MSAKERQTVLFGDTGVTTPIDTTDRVSLTDGAVFVAQRIEIRPSNKYGEYVVFDGEDLDGKAFHAYSTSSVVLQQAKALLEKYGGEKCALTHDVLCAVKSVLSVNTGRRFFTLV*
Ga0116234_1245533	Ga0116234_12455331	F011196	AEPGLETAKHGGMDMADESTVKPTDEQIAQKRAEFLAQAGQAFDRMFGSDGQNGLVTFQEREDRACQVGDELTRWLMAEHLSLDPVGGTSVERDCPICGGPVRYESAQQAEGELREFQTRRGKIQYRRAAARCPRCRKIFFPA*
Ga0116234_1247418	Ga0116234_12474182	F085858	MKEFNEVIKFKTIPITFMFHCTLCNYEITDYDRHFGLIRMNEHVIAAHPTEVHSLDKEDLYSRKPAIVLENF*
Ga0116234_1249630	Ga0116234_12496302	F051061	MSLLDKLEERSKKRERKSLYIPELEETVYWYPMTAGERQRIMNAAGFKYSANSISMDNAKYKASLIIEKLEDKDGKKIFSNTPEHKDLLINRIDDELLSRIASAIDPPKSEEQQIEEAKND*
Ga0116234_1274897	Ga0116234_12748972	F040648	VINNDEVRLKIDPLLDTAREGVTALETATTLIHIPTREMAKIQTAITKMREAAVYIENRARNLPVRSNATTKSALKEALKGASQEQIERAYTILSGQDAAYEVPAEGEEE*
Ga0116234_1277105	Ga0116234_12771054	F035785	ENALKMTEQEMLDVVFEASENSVVELNVVDPDSQAGDNDGIYLEIVKLDDYESVVRDRWPNQDGDRHIVSTDDIYSIYRALVDQVEEVA*

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300009542: Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R2_A SIP RNA (Metagenome Metatranscriptome)

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences