Sample 3300009901

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

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Sample 3300009901

3300009901: Microbial communities of marine sponge Stylissa flabelliformis from Great Barrier Reef, Australia - S4

Overview

Basic Information
IMG/M Taxon OID	3300009901 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0120440 \| Gp0149081 \| Ga0131758
Sample Name	Microbial communities of marine sponge Stylissa flabelliformis from Great Barrier Reef, Australia - S4
Sequencing Status	Permanent Draft
Sequencing Center	University of New South Wales
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	37975718
Sequencing Scaffolds	35
Novel Protein Genes	36
Associated Families	16

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	30
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Porifera → Demospongiae → Heteroscleromorpha → Haplosclerida → Niphatidae → Amphimedon → Amphimedon queenslandica	4
All Organisms → cellular organisms → Eukaryota → Opisthokonta	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Sponge Microbes In A High Co2 World
Type	Host-Associated
Taxonomy	Host-Associated → Porifera → Sponge → Unclassified → Unclassified → Marine → Sponge Microbes In A High Co2 World

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	Unclassified
Earth Microbiome Project Ontology (EMPO)	Host-associated → Animal → Animal corpus

Location Information
Location	Davies Reef, Great Barrier Reef, Australia
Coordinates	Lat. (^o)	-18.833	Long. (^o)	147.683	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F007683	Metagenome / Metatranscriptome	346	Y
F010384	Metagenome / Metatranscriptome	304	Y
F015565	Metagenome / Metatranscriptome	253	Y
F017963	Metagenome / Metatranscriptome	237	Y
F022150	Metagenome / Metatranscriptome	215	Y
F023046	Metagenome / Metatranscriptome	211	Y
F024258	Metagenome / Metatranscriptome	206	Y
F035204	Metagenome / Metatranscriptome	172	Y
F041611	Metagenome / Metatranscriptome	159	Y
F043240	Metagenome / Metatranscriptome	156	Y
F059684	Metagenome / Metatranscriptome	133	Y
F069743	Metagenome / Metatranscriptome	123	Y
F073151	Metagenome / Metatranscriptome	120	Y
F074458	Metagenome / Metatranscriptome	119	Y
F083784	Metagenome	112	Y
F100481	Metagenome	102	N

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
Ga0131758_104910	Not Available	1010	Open in IMG/M
Ga0131758_105198	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Porifera → Demospongiae → Heteroscleromorpha → Haplosclerida → Niphatidae → Amphimedon → Amphimedon queenslandica	984	Open in IMG/M
Ga0131758_105565	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Porifera → Demospongiae → Heteroscleromorpha → Haplosclerida → Niphatidae → Amphimedon → Amphimedon queenslandica	953	Open in IMG/M
Ga0131758_106050	All Organisms → cellular organisms → Eukaryota → Opisthokonta	915	Open in IMG/M
Ga0131758_106413	Not Available	892	Open in IMG/M
Ga0131758_106723	Not Available	875	Open in IMG/M
Ga0131758_107280	Not Available	844	Open in IMG/M
Ga0131758_107847	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Porifera → Demospongiae → Heteroscleromorpha → Haplosclerida → Niphatidae → Amphimedon → Amphimedon queenslandica	814	Open in IMG/M
Ga0131758_108254	Not Available	795	Open in IMG/M
Ga0131758_108573	Not Available	781	Open in IMG/M
Ga0131758_109169	Not Available	758	Open in IMG/M
Ga0131758_109582	Not Available	745	Open in IMG/M
Ga0131758_109708	Not Available	740	Open in IMG/M
Ga0131758_109980	Not Available	731	Open in IMG/M
Ga0131758_110677	Not Available	710	Open in IMG/M
Ga0131758_110801	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Porifera → Demospongiae → Heteroscleromorpha → Haplosclerida → Niphatidae → Amphimedon → Amphimedon queenslandica	706	Open in IMG/M
Ga0131758_110988	Not Available	702	Open in IMG/M
Ga0131758_111774	Not Available	680	Open in IMG/M
Ga0131758_111840	Not Available	679	Open in IMG/M
Ga0131758_113143	Not Available	649	Open in IMG/M
Ga0131758_113446	Not Available	642	Open in IMG/M
Ga0131758_113481	Not Available	641	Open in IMG/M
Ga0131758_114452	Not Available	620	Open in IMG/M
Ga0131758_115628	Not Available	597	Open in IMG/M
Ga0131758_116233	Not Available	586	Open in IMG/M
Ga0131758_117013	Not Available	574	Open in IMG/M
Ga0131758_118804	Not Available	547	Open in IMG/M
Ga0131758_119984	Not Available	531	Open in IMG/M
Ga0131758_120075	Not Available	530	Open in IMG/M
Ga0131758_120376	Not Available	526	Open in IMG/M
Ga0131758_120790	Not Available	521	Open in IMG/M
Ga0131758_121541	Not Available	512	Open in IMG/M
Ga0131758_121630	Not Available	511	Open in IMG/M
Ga0131758_121693	Not Available	511	Open in IMG/M
Ga0131758_122404	Not Available	504	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0131758_104910	Ga0131758_1049101	F059684	HLIGSHLEVAVEGRKLAYTVRFASYKAVARKRRQSREMK*
Ga0131758_105198	Ga0131758_1051981	F022150	VGPQFPEFKARFSAMAGWHFSRDLTKRLLIGGCGHSHVSVRYG*
Ga0131758_105565	Ga0131758_1055651	F010384	MSYVQFRQLGIRKRFIRSLLVVDRFSLSWGSGRGLLEVYWGWTDAASAGHLEEV
Ga0131758_106050	Ga0131758_1060502	F017963	VGTGRAISILFGINGVRNKRSHLVGPPFPEFKACFSATAGWHFSRDLTRRLLIGGYGQSHVSTKHG*
Ga0131758_106413	Ga0131758_1064132	F010384	QLGIRKRFIRSLLRVDRCSLSWASGRGLLEVYCGWTDAASAGDLEEVY*
Ga0131758_106723	Ga0131758_1067231	F024258	MRLHVNYACAIGTRLNLELLCVAQNGVVLELRRIAASQSCHSCQFANKRAERGYYDKSDIVLCVK*
Ga0131758_107280	Ga0131758_1072801	F007683	MSLGLRFCVSRKGGTGGGWWVHPKGANSMAASGLVFRSYLVDTGRAISVLFGINGVRNQRSHLVGPPFPEF
Ga0131758_107847	Ga0131758_1078472	F022150	GINGVRNQRSHLVGPPFPEFKARFSAMAGWHFLRDLTRHLLIGGCGQSHISAKHG*
Ga0131758_108254	Ga0131758_1082542	F035204	QVIESECDGENLEILSMESTVLSMHYVIHIISFHVTLMRPD*
Ga0131758_108573	Ga0131758_1085731	F010384	PQLGIWKRFIRSLLGVDRCSLIWGSGRGLLEVYQGWTDAASAGDLKEVY*
Ga0131758_109169	Ga0131758_1091691	F035204	MPPCEPVFQVIESGRDGENLEKLSMETTVLNVHYVMHILGFHMTFNET*
Ga0131758_109582	Ga0131758_1095821	F041611	MLELKFAIYCRAATPPSQASYAVLAEESQAFFKHSPHTNSISNSAILHNYISLLSDLCACVHVKKKWRRKGSHSSSVGGSNRLM*
Ga0131758_109708	Ga0131758_1097082	F010384	MQPQLGIWKRFIRSLLGVDRCSLSWASGRGLLEVYWGWTDAASAGDQEEVY*
Ga0131758_109980	Ga0131758_1099801	F010384	GGGQMQPQQGIWKRFIRSLLRVDRCSLSWASGRGLLEVYQGWTDAASAGDQEEVY*
Ga0131758_110677	Ga0131758_1106771	F010384	MQPHLGIRKRFIRSLSGVDRCSLSWASGRGLLEVYWGWTDAASAGDQE
Ga0131758_110801	Ga0131758_1108011	F010384	MGGISKRFIRSLLGVDRCSLSWGSRRGLLEVYPGWTDAASAGDLEEVY*
Ga0131758_110988	Ga0131758_1109881	F010384	IWKRFIRSLLRVDRCSLSWASGRGLLEVCWGWTNAASAGHLEEVY*
Ga0131758_111774	Ga0131758_1117741	F083784	MDFNNTQPFEVTMAAGYSVVSADIPIFDDEINEAAEDFVVVLEVVNSTNPVEFTTQTTVCRIPQSDRKCHLAKV*
Ga0131758_111840	Ga0131758_1118401	F022150	GINGVRNQRSHLVGPPFPEFKARFSATAGWHFSRDLTRRLLIGGCGHSHVSVKYG*
Ga0131758_113143	Ga0131758_1131432	F024258	CTIGTRLKLDLLFVAQNSIVLQLHRTAASQNHHFCQFAEKRAERGNYDESVVVLYVK*
Ga0131758_113446	Ga0131758_1134461	F074458	MYAPNAVTYCQVWFFEMAGILSAVFVFDDNLATELETYTKANVELLSRVAIIALASGDTFSESSLLHW*
Ga0131758_113481	Ga0131758_1134811	F024258	MRLHVNYACAIGTRLNLDLLCVAQNDVVLELRRIAASQNCHSCQFANKRAERGYYDESDI
Ga0131758_114452	Ga0131758_1144521	F043240	EAQEKPWNKTGGMTPWTSTASAGVLKSGESETTPPIIARLCNVTLAVQMQSPNS*
Ga0131758_115628	Ga0131758_1156281	F022150	RNKRSHLVGPPFPEFKARFSATAGWHFSSDLARRSLIGGCGHSHVSVKYG*
Ga0131758_116233	Ga0131758_1162331	F043240	KPWNKTGGMTPWMASTASAGAFKSGESETTPPIIARLRNVTCPPP*
Ga0131758_117013	Ga0131758_1170131	F022150	SHLVGPPFPELKACFSATTGWHFSRDLDRHLLIGGCGHGHISVKYG*
Ga0131758_118804	Ga0131758_1188041	F035204	MPPCEPVFQVIESGLDGENLEKLSMETTVLNVHYVIHIIGFHVTLMRHD*
Ga0131758_119984	Ga0131758_1199841	F043240	WSIEAQEKPWNKTGGMTPWMASTVSAGALKSGESKTMLPIIARLRNVTCSPP*
Ga0131758_120075	Ga0131758_1200751	F069743	HTYMQSHTTHLSIAPSDYGALTGFLLGPFSDSVRQLSFNVSIVNDAIPEDDEDFTARLTLSPADVGKSVTVDPDLATVTILDDEGTIAV*
Ga0131758_120376	Ga0131758_1203761	F073151	RYVSGFEKRGNFAQNAKFWHFSSYHHFKAVRASDFILGLGAHQAFCFTNPMFEAVDSLLSEVVAVKPKV*
Ga0131758_120790	Ga0131758_1207901	F041611	LKFAIYYRAASLPSQASYAVLAEESQAFFKLSPHTNSISNSAILCNNYISLLSDWCACIHLKKKMAS*
Ga0131758_121541	Ga0131758_1215411	F015565	MLLFCAKTIVKDSRKFELARLKKKKEKHFGRLVTFWFVTFAMHFSATGCVFRHENTRR*
Ga0131758_121630	Ga0131758_1216302	F023046	PFPEFKARFSATAGWHFSRDLTRRLLIGGCGQSTHLLSMAEITSGSSFEPNKPTEQQLGYV*
Ga0131758_121693	Ga0131758_1216932	F015565	MLLFCSKTIVKESRKFELARLKKKKEKHFGRLATVWFGAFAMLCSATGCVFRHENTRK*
Ga0131758_121774	Ga0131758_1217741	F100481	VADIVSVTMPLSSIKDLAVAISTRAGPGEDDPPLYKLGSKPVQAVCKGESGALN*
Ga0131758_122404	Ga0131758_1224041	F083784	MDFNGTPFEVTMRAGTTVVTADISIVDDEINEAEEEFVIVLEVVSNTTNSVEFTTQTTVCRISQSDRKYHLNYSMNCHG*

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