Sample 3300009913

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

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Sample 3300009913

3300009913: Microbial communities of marine sponge Stylissa flabelliformis from Great Barrier Reef, Australia - S1

Overview

Basic Information
IMG/M Taxon OID	3300009913 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0120440 \| Gp0149071 \| Ga0131749
Sample Name	Microbial communities of marine sponge Stylissa flabelliformis from Great Barrier Reef, Australia - S1
Sequencing Status	Permanent Draft
Sequencing Center	University of New South Wales
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	49235183
Sequencing Scaffolds	21
Novel Protein Genes	23
Associated Families	13

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	19
All Organisms → Viruses → Predicted Viral	1
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Porifera → Demospongiae → Heteroscleromorpha → Haplosclerida → Niphatidae → Amphimedon → Amphimedon queenslandica	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Sponge Microbes In A High Co2 World
Type	Host-Associated
Taxonomy	Host-Associated → Porifera → Sponge → Unclassified → Unclassified → Marine → Sponge Microbes In A High Co2 World

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	Unclassified
Earth Microbiome Project Ontology (EMPO)	Host-associated → Animal → Animal corpus

Location Information
Location	Davies Reef, Great Barrier Reef, Australia
Coordinates	Lat. (^o)	-18.833	Long. (^o)	147.683	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F010384	Metagenome / Metatranscriptome	304	Y
F013612	Metagenome / Metatranscriptome	269	Y
F015565	Metagenome / Metatranscriptome	253	Y
F017963	Metagenome / Metatranscriptome	237	Y
F020857	Metagenome / Metatranscriptome	221	Y
F022150	Metagenome / Metatranscriptome	215	Y
F038110	Metagenome / Metatranscriptome	166	Y
F041611	Metagenome / Metatranscriptome	159	Y
F043240	Metagenome / Metatranscriptome	156	Y
F059684	Metagenome / Metatranscriptome	133	Y
F074458	Metagenome / Metatranscriptome	119	Y
F076933	Metagenome / Metatranscriptome	117	Y
F083784	Metagenome	112	Y

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
Ga0131749_103799	Not Available	1263	Open in IMG/M
Ga0131749_106177	All Organisms → Viruses → Predicted Viral	1011	Open in IMG/M
Ga0131749_110298	Not Available	815	Open in IMG/M
Ga0131749_110326	Not Available	814	Open in IMG/M
Ga0131749_110594	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Porifera → Demospongiae → Heteroscleromorpha → Haplosclerida → Niphatidae → Amphimedon → Amphimedon queenslandica	805	Open in IMG/M
Ga0131749_111859	Not Available	770	Open in IMG/M
Ga0131749_112359	Not Available	756	Open in IMG/M
Ga0131749_112415	Not Available	755	Open in IMG/M
Ga0131749_112712	Not Available	747	Open in IMG/M
Ga0131749_112876	Not Available	744	Open in IMG/M
Ga0131749_112914	Not Available	742	Open in IMG/M
Ga0131749_114908	Not Available	698	Open in IMG/M
Ga0131749_120601	Not Available	602	Open in IMG/M
Ga0131749_121286	Not Available	593	Open in IMG/M
Ga0131749_121826	Not Available	586	Open in IMG/M
Ga0131749_122767	Not Available	574	Open in IMG/M
Ga0131749_123171	Not Available	569	Open in IMG/M
Ga0131749_124057	Not Available	558	Open in IMG/M
Ga0131749_124601	Not Available	552	Open in IMG/M
Ga0131749_125411	Not Available	543	Open in IMG/M
Ga0131749_130114	Not Available	500	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0131749_103799	Ga0131749_1037992	F043240	ITVVNRGPWNGTGGMAPWKASTASAGVLKSGELETTPPIIARFRNVACPPP*
Ga0131749_106177	Ga0131749_1061772	F010384	QMQPHLGIRKRFIRSLLMVDRCSLSWASGRGLLKVYWGWTDAA*
Ga0131749_108282	Ga0131749_1082821	F041611	PSQASYAVLAEESQAFFKHSPHTNSISNSAILHNYISLLSDLCACVHVKKKWRRKGSHSSSVGGSNRLA*
Ga0131749_108886	Ga0131749_1088861	F076933	MIYANCGAIAVITSTTYMTIVELFDEFYAPFSPEVIRSLIVTPTSILNDIILSMKTERSAKACC*
Ga0131749_110298	Ga0131749_1102981	F020857	MKMNFTIAVAPPFVHPMTSLPATPTHSVWKYGFLSEPTRQRQVAKYGNLERCESLSFSGDIESLEPSKF*
Ga0131749_110326	Ga0131749_1103261	F022150	INGVRNKRSHLVGPPFPEFKARFSATAGWHFSSDLARRSLIGGCGHSHVSVKYG*
Ga0131749_110594	Ga0131749_1105941	F010384	VIWKRFVSSLSEVDRCSLSWGSGRGLLEVYLASAGDLE
Ga0131749_111859	Ga0131749_1118592	F074458	MHAPNAVTYCQVWFFEMAGISSAVFVLDDNLATELETCTKANVELLSRMAIIALASGNTFSESGLLHW*
Ga0131749_112359	Ga0131749_1123591	F010384	MRGGQMQPHLGIVKRFIRSLSGVDRCSLSWRSRRGLLEVYEGWTDAASAGDLEEVY*
Ga0131749_112415	Ga0131749_1124153	F013612	VLRQQKGQTGGGGWVHPKGANSMAASGLVFRSDLVGTERAISIPFGINEVTNQRSHLVGPPFPEFKAHFSAMAGWHFSRDLTRHMLIGGYGQSHISSKHG*
Ga0131749_112712	Ga0131749_1127121	F020857	IRDTFVFFLQDYCALQELLIKMNFTIAVAPPFVHPMTSLPATPTHSVRKYGFFSERRQVAKHGNLKRCESLSFSGDRA*
Ga0131749_112876	Ga0131749_1128761	F017963	VSRSDLVGTRRAISVPFGVNVVRNKQSHLVGPPFPAFKACFSAVAGWHFSRDVTRHLLIGGCGQSHVSVKDG*
Ga0131749_112914	Ga0131749_1129141	F059684	HLTASHLEVAVGGTKLALTVRFTSYKAVARRRRQSRDKK*
Ga0131749_114908	Ga0131749_1149081	F015565	MLLFCAKSIVEESSKFELACLKKKKKEKHFGCLATFWLGTFAMPFSTTECIVRQENTQR*
Ga0131749_120601	Ga0131749_1206012	F041611	MFELKFAIYYRAASLPSQASYTVLAKESQAFVKHSPHTYSIQQSNYISLLSDLCTWRRKGSHSFSVSGSNRLV*
Ga0131749_121286	Ga0131749_1212861	F038110	MVEVCNPAVSEDRDHTSKVDGPESMAVSIHDASYKLMNLKIILLHIHCLVDMLTSQARLSYLVMSERYHIVHVMVSEDR*
Ga0131749_121826	Ga0131749_1218261	F043240	MASTASAGALKSGESELVTPPIIARLRNVTCPPP*
Ga0131749_122767	Ga0131749_1227671	F083784	MDFNNTQPFEVTMAAGTEAVTADIPIFDDEINEAAEDFVVVLEDVNTTNPVEFTTQTTVCRIPQSDRKCH
Ga0131749_123171	Ga0131749_1231711	F015565	MLLFCAKTIVKESRKFELARLKKKKKEKHFGCLVTFWFGTFAMLFSATGCVFCHENTRR*
Ga0131749_124057	Ga0131749_1240571	F015565	MLLFCAKTIAKEPRKFELACLKKKKKENHFGCLATSWFSTFEMLFSTTWCVVHHENTRK*
Ga0131749_124601	Ga0131749_1246011	F010384	MQPQMGIWKRFIRNLLGVDR*SLIWGFGRGLLEVYQAWTDAASAGDVEEVYYKFMIGGQ
Ga0131749_125411	Ga0131749_1254111	F010384	LGIWKRFIRSLLRVDRCTLSWASGRGLLEVCWVWTDAASAGHLEEVY*
Ga0131749_130114	Ga0131749_1301142	F010384	VYYKFISGGQMQPQLGMWKRFIRILSEVDRCSLSWGSGSGLLEIYLRWTDADSAGDLEEVY*

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