NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Sample 3300009956

3300009956: Human saliva viral communities from oral cavities of healthy adults from Alicante,Spain - individual 15



Overview

Basic Information
IMG/M Taxon OID3300009956 Open in IMG/M
GOLD Reference
(Study | Sequencing Project | Analysis Project)		Gs0120337 | Gp0151219 | Ga0133746
Sample NameHuman saliva viral communities from oral cavities of healthy adults from Alicante,Spain - individual 15
Sequencing StatusPermanent Draft
Sequencing CenterAutonomous University of Barcelona
Published?N
Use PolicyOpen

Dataset Contents
Total Genome Size5905879
Sequencing Scaffolds8
Novel Protein Genes12
Associated Families10

Dataset Phylogeny
Taxonomy GroupsNumber of Scaffolds
Not Available1
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes5
All Organisms → Viruses → Predicted Viral2

Ecosystem and Geography

Ecosystem Assignment (GOLD)
NameHuman Saliva Viral Communities From Oral Cavities Of Healthy Adults From Alicante,Spain
TypeHost-Associated
TaxonomyHost-Associated → Human → Digestive System → Oral Cavity → Saliva → Human Oral Cavity → Human Saliva Viral Communities From Oral Cavities Of Healthy Adults From Alicante,Spain

Alternative Ecosystem Assignments
Environment Ontology (ENVO)Unclassified
Earth Microbiome Project Ontology (EMPO)Host-associated → Animal → Animal secretion

Location Information
LocationAlicante,Spain
CoordinatesLat. (o)38.3852246Long. (o)-0.5132249Alt. (m)N/ADepth (m)N/A
Location on Map
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Associated Families

FamilyCategoryNumber of Sequences3D Structure?
F036281Metagenome170N
F043991Metagenome155N
F049707Metagenome146N
F051214Metagenome144N
F071329Metagenome122N
F074985Metagenome119N
F081510Metagenome114N
F095632Metagenome105N
F101360Metagenome102N
F105376Metagenome100N

Associated Scaffolds

ScaffoldTaxonomyLengthIMG/M Link
Ga0133746_10006Not Available34158Open in IMG/M
Ga0133746_10021All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes15438Open in IMG/M
Ga0133746_10047All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes8116Open in IMG/M
Ga0133746_10100All Organisms → Viruses → Predicted Viral4484Open in IMG/M
Ga0133746_10322All Organisms → Viruses → Predicted Viral2451Open in IMG/M
Ga0133746_10737All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes1661Open in IMG/M
Ga0133746_11346All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes1166Open in IMG/M
Ga0133746_12152All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes822Open in IMG/M

Sequences

Scaffold IDProtein IDFamilySequence
Ga0133746_10006Ga0133746_1000610F105376MNKNNEQPEVSAKEFGALGADVIHIKESVDRHTVTLERIENIARANVTQAQLATHEKEAEEKYVKRTEVEGVMNFWKLVTSNLAKLFAIALVGLAIYATNNLIQQNKAVTELKEEVQTQVRSK*
Ga0133746_10021Ga0133746_100218F101360VSKENSLRRAAIAAHIAKVASQEKKKALKELEEYMAPGDTSKPMIDGLQVGTVSVSAPQPRYQVVDEKALVAWLEWNKPDAVHKVPAPWFVAAAALDGFIKQTGEVPDGVEVVQGDPRISVRISTTQEEAIRELISTGDISILEIEGGDA*
Ga0133746_10047Ga0133746_1004713F049707VVSEYKSPHNDGHDPYILIWEYGSDIRRVEFVERWTAWDETGWTVWYFRLVGGGIMTFSAREWEQKDDVNHLTTIWMKPSLYDIERKEN*
Ga0133746_10100Ga0133746_1010010F074985MMELTDGGWYKTPRIINGKDFLAHIHDTYASGNAMYVEFKASEGEVRILEYRQLYDVDTESSVLFTINTYPQESILLKNIEEYEFIQYRPQQAWKAIHMGSTKRINLEQFDQIWLDQTFQKLHPVIVNHDGKFWHVMGLKLDVDADGSFWGLYLKRQDSDFMKEIRMPLTQKFIYNPISGSWSLDDPTQEIKDLEEIKQTLRADAILDVTVSGVPMKLIRVQDVSYI
Ga0133746_10100Ga0133746_101003F071329MLPVAKIIISGLTSIGAGMIASNLTKPIVSNANGIAKILLWFGSVGTGVAASAIVAREVELQFDATVKAVQEARDHVEIED*
Ga0133746_10100Ga0133746_101004F051214MPGKIVAHDTHLRIDTEFIELKDCFEAFRRGVEYREKNDVDDILVICNSTDLIEYQLKNGDSFVVTYDPIHRIIVMRVFLHDEDITIKPIYIYNNREYQIACEFLRQIMHDKIDLKKEWLA*
Ga0133746_10100Ga0133746_101005F043991MSQRDKSVIDYFDLNGDLNEEAYEFEDVKLEEYIDKRSNVKPSWVGKYSHQMHFDLPDDTEVSFYKGLNIVYADINFAGGIRTILFKCRQKKNLTRFISRVLEIAQGDPSNVHPDFRA*
Ga0133746_10100Ga0133746_101009F036281MITLIKVDEGPVDIYELRMQYLAKLKETDGVMLPTFIYRNKDLFVTEFKPTCDDQWIMYMTNAEGLITKMRIKNGDLMSNGSVLFLAEERKTYNAKEYYDYWAAREGKPAPFFYESRQYHVKSFMRVPGSTDLWITAEREHGHWYTFRMSDDQKSKFTRHTMTNEKGHQSYDWVLENVEWAADTIRYF*
Ga0133746_10322Ga0133746_103223F081510MKAIKSAAKHSYTVSKILAKKYAPVALVTTGLVGYGVAVYKGIQSGKKLEATKAKYEAKDEAGEEYTRMDVVKDVTKDVAVPVAIAVASTAAIGLGFAIQTNRLKAVSAALTMVTEEHARYRLRAKEVLDEETFKKIDAPIETKKVEIDGKEVEVESIVPKEGDFYGRWFKYSRHYASDDPDYNEAWVKEVDNMLTQKINTQSGGGMLTFAEVLDALGFEVPKAALPFGWTDTDGFYLEWDTHEVWNEDKQEHEPQIYVRWQTPRNLYSTTNLRDIIPGRKELA*
Ga0133746_10737Ga0133746_107374F095632MSFKETTGYKVVSLVASTSASITAGAVVGALCPPAGVVLTAIYGIGSSVLGTYVGDKAGRQYAETLAETIDSLQTPQNN*
Ga0133746_11346Ga0133746_113461F051214MGYRSLKGAHMPGKIIANHTHLRIDTEFIELGDCFEAFRRGVEYKEKNDVDDILVICNTTDLIEYQLKNGDSVIVTHDPIHRIMVMRLFLHNENITLKPIYIYNNREYQIACEFLRQILHDRIDLKKEW
Ga0133746_12152Ga0133746_121522F051214MSGKIIANHTHLRIDTEFIELGDCFEALRRGMEYKEKNDADDILVICNTTDLIEYQLKNGDSVIVTHDPIHRIMVMRLFLHDENIALKPVYIYNNREYQIACEFLRQILHDKIDLKKEWLL*
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