x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our
privacy policy.
OK
Sample 3300009979
3300009979: Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_126 metaG
Overview
Basic Information |
---|
IMG/M Taxon OID | 3300009979 Open in IMG/M |
GOLD Reference (Study | Sequencing Project | Analysis Project) | Gs0114297 | Gp0127579 | Ga0105032 |
Sample Name | Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_126 metaG |
Sequencing Status | Permanent Draft |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Published? | N |
Use Policy | Open |
Dataset Contents |
---|
Total Genome Size | 32258315 |
Sequencing Scaffolds | 8 |
Novel Protein Genes | 9 |
Associated Families | 9 |
Dataset Phylogeny |
---|
Taxonomy Groups | Number of Scaffolds |
All Organisms → Viruses → Varidnaviria → Bamfordvirae → Preplasmiviricota → Tectiliviricetes → Kalamavirales → Tectiviridae → Deltatectivirus | 1 |
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes | 1 |
Not Available | 6 |
Ecosystem and Geography
Ecosystem Assignment (GOLD) |
---|
Name | Switchgrass Associated Microbial Communities From Austin, Texas, Usa, To Study Host-Microbe Interactions |
Type | Host-Associated |
Taxonomy | Host-Associated → Plants → Unclassified → Unclassified → Unclassified → Switchgrass Associated → Switchgrass Associated Microbial Communities From Austin, Texas, Usa, To Study Host-Microbe Interactions |
Alternative Ecosystem Assignments |
---|
Environment Ontology (ENVO) | Unclassified |
Earth Microbiome Project Ontology (EMPO) | Host-associated → Plant → Plant surface |
Location Information |
---|
Location | Austin, Texas |
Coordinates | Lat. (o) | 30.387 | Long. (o) | -97.7301 | Alt. (m) | N/A | Depth (m) | N/A |
Location on Map |
---|
|
Zoom: |
Powered by OpenStreetMap © |
Associated Families
Associated Scaffolds
Sequences