Sample 3300010010

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

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Sample 3300010010

3300010010: Microbial communities of stony corals with Black-band disease (BBD) from Carrie Bow Cay Field Station, Belize; BBD Transitions coral #3 sample B3

Overview

Basic Information
IMG/M Taxon OID	3300010010 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0120461 \| Gp0151266 \| Ga0133901
Sample Name	Microbial communities of stony corals with Black-band disease (BBD) from Carrie Bow Cay Field Station, Belize; BBD Transitions coral #3 sample B3
Sequencing Status	Permanent Draft
Sequencing Center	University of Maryland
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	41781415
Sequencing Scaffolds	3
Novel Protein Genes	3
Associated Families	3

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	3

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Black Band Disease Transitions
Type	Host-Associated
Taxonomy	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated → Black Band Disease Transitions

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	Unclassified
Earth Microbiome Project Ontology (EMPO)	Host-associated → Animal → Animal surface

Location Information
Location	Belize: Carrie Bow Cay Field Station
Coordinates	Lat. (^o)	16.80288	Long. (^o)	-88.08213	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F047483	Metagenome / Metatranscriptome	149	Y
F051693	Metagenome / Metatranscriptome	143	N
F085126	Metagenome / Metatranscriptome	111	Y

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
Ga0133901_105645	Not Available	998	Open in IMG/M
Ga0133901_118714	Not Available	528	Open in IMG/M
Ga0133901_119355	Not Available	518	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0133901_105645	Ga0133901_1056451	F085126	VAIFRPTSSKVSVQKVLLCPFDCKPRQSGVSLESPELENILQVPGNGAEVDENYDARNGLSVILSVLNLSRAILRH*
Ga0133901_118714	Ga0133901_1187141	F047483	MQATVMAVTVDEMFICPKLGQNLSEMEVRTFVRIQKVIWDQLVASKAEFIQK*
Ga0133901_119355	Ga0133901_1193551	F051693	VIKFTDKLPFACVRFIVKYIEENIENFNTRLISRGYPEQMVEKTLREVKYKDRKEALKQKSKIAEGTTTLCVGQFHSTVNTKLWKA*

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