Sample 3300010947

Overview

Basic Information
IMG/M Taxon OID	3300010947 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0120447 \| Gp0151146 \| Ga0138905
Sample Name	Termite gut microbial communities - laboratory nests. Combined Assembly of Gp0151227, Gp0151152, Gp0151149, Gp0151146
Sequencing Status	Permanent Draft
Sequencing Center	University of Luxembourg, Luxembourg Institute of Science and Technology
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	221304184
Sequencing Scaffolds	9
Novel Protein Genes	9
Associated Families	9

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Eukaryota → Opisthokonta	1
Not Available	7
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Polyneoptera → Dictyoptera → Blattodea → Blaberoidea → Ectobiidae → Blattellinae → Blattella → Blattella germanica	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Multi-Omic Termite Study
Type	Host-Associated
Taxonomy	Host-Associated → Insecta → Digestive System → Unclassified → Unclassified → Termite Gut → Multi-Omic Termite Study

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	Unclassified
Earth Microbiome Project Ontology (EMPO)	Unclassified

Location Information
Location	France
Coordinates	Lat. (^o)	48.913957	Long. (^o)	2.485499	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Family	Category	Number of Sequences	3D Structure?
F000394	Metagenome	1186	Y
F001002	Metagenome	809	Y
F003069	Metagenome	509	Y
F006796	Metagenome	364	Y
F008365	Metagenome	334	Y
F011413	Metagenome	291	Y
F014340	Metagenome	264	Y
F050745	Metagenome	145	Y
F075418	Metagenome	119	Y

Family

Category

Number of Sequences

3D Structure?

F000394

Metagenome

1186

F001002

Metagenome

809

F003069

Metagenome

509

F006796

Metagenome

364

F008365

Metagenome

334

F011413

Metagenome

291

F014340

Metagenome

264

F050745

Metagenome

145

F075418

Metagenome

119

Scaffold	Taxonomy	Length	IMG/M Link
Ga0138905_1094487	All Organisms → cellular organisms → Eukaryota → Opisthokonta	538	Open in IMG/M
Ga0138905_1214773	Not Available	2257	Open in IMG/M
Ga0138905_1287668	Not Available	764	Open in IMG/M
Ga0138905_1339150	Not Available	1251	Open in IMG/M
Ga0138905_1351502	Not Available	864	Open in IMG/M
Ga0138905_1352772	Not Available	510	Open in IMG/M
Ga0138905_1361879	Not Available	509	Open in IMG/M
Ga0138905_1533091	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Polyneoptera → Dictyoptera → Blattodea → Blaberoidea → Ectobiidae → Blattellinae → Blattella → Blattella germanica	557	Open in IMG/M
Ga0138905_1566507	Not Available	504	Open in IMG/M

Scaffold

Taxonomy

Length

IMG/M Link

Ga0138905_1094487

All Organisms → cellular organisms → Eukaryota → Opisthokonta

538

Open in IMG/M

Ga0138905_1214773

Not Available

2257

Open in IMG/M

Ga0138905_1287668

Not Available

764

Open in IMG/M

Ga0138905_1339150

Not Available

1251

Open in IMG/M

Ga0138905_1351502

Not Available

864

Open in IMG/M

Ga0138905_1352772

Not Available

510

Open in IMG/M

Ga0138905_1361879

Not Available

509

Open in IMG/M

Ga0138905_1533091

All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Polyneoptera → Dictyoptera → Blattodea → Blaberoidea → Ectobiidae → Blattellinae → Blattella → Blattella germanica

557

Open in IMG/M

Ga0138905_1566507

Not Available

504

Open in IMG/M

Scaffold ID	Protein ID	Family	Sequence
Ga0138905_1094487	Ga0138905_10944871	F003069	NNWSQWNSSEKLKEKFGSGTRKTFDRFTTKDSYTWNIIHNTQSTAV*
Ga0138905_1214773	Ga0138905_12147731	F075418	VHRNIITNYSQQDAAFLNLFIFTDSLHVSGGSSTHHQEFHLIHGS
Ga0138905_1287668	Ga0138905_12876682	F008365	MDPLITEAIELEMYPYNMKRDDGLNMGKSWKPLLHLLKERRQPPGTQ*
Ga0138905_1339150	Ga0138905_13391502	F050745	MFFKRLVLGKGGVDDVRREPADSSDNAVSVAMAHWNVEHRVFAVEQFFLETVIL*
Ga0138905_1351502	Ga0138905_13515021	F014340	QQDAATSQVYYNRPDHDQQHCYHHAPTVNPEAATAFVVAPDDGHEDARNMLSCI*
Ga0138905_1352772	Ga0138905_13527721	F000394	MLYIYIYMERPLLMFPDHTQRRSTVGRTPPDERPARRRD
Ga0138905_1361879	Ga0138905_13618791	F006796	SLRGSMGTGTKRDESSIGRVWAARFYHVTARSRLARVLKLMNRLFL*
Ga0138905_1533091	Ga0138905_15330911	F011413	MNKCVPLTKRSQGRPKYGWEDNITQDICQMKIKNWIACVQDQGKWKEVVEKAKTFR*
Ga0138905_1566507	Ga0138905_15665072	F001002	CLKVNNLTLILLTKENGELLIMPANRRWDLIRALKG*

Scaffold ID

Protein ID

Family

Sequence

Ga0138905_1094487

Ga0138905_10944871

F003069

NNWSQWNSSEKLKEKFGSGTRKTFDRFTTKDSYTWNIIHNTQSTAV*

Ga0138905_1214773

Ga0138905_12147731

F075418

VHRNIITNYSQQDAAFLNLFIFTDSLHVSGGSSTHHQEFHLIHGS

Ga0138905_1287668

Ga0138905_12876682

F008365

MDPLITEAIELEMYPYNMKRDDGLNMGKSWKPLLHLLKERRQPPGTQ*

Ga0138905_1339150

Ga0138905_13391502

F050745

MFFKRLVLGKGGVDDVRREPADSSDNAVSVAMAHWNVEHRVFAVEQFFLETVIL*

Ga0138905_1351502

Ga0138905_13515021

F014340

QQDAATSQVYYNRPDHDQQHCYHHAPTVNPEAATAFVVAPDDGHEDARNMLSCI*

Ga0138905_1352772

Ga0138905_13527721

F000394

MLYIYIYMERPLLMFPDHTQRRSTVGRTPPDERPARRRD

Ga0138905_1361879

Ga0138905_13618791

F006796

SLRGSMGTGTKRDESSIGRVWAARFYHVTARSRLARVLKLMNRLFL*

Ga0138905_1533091

Ga0138905_15330911

F011413

MNKCVPLTKRSQGRPKYGWEDNITQDICQMKIKNWIACVQDQGKWKEVVEKAKTFR*

Ga0138905_1566507

Ga0138905_15665072

F001002

CLKVNNLTLILLTKENGELLIMPANRRWDLIRALKG*

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300010947: Termite gut microbial communities - laboratory nests. Combined Assembly of Gp0151227, Gp0151152, Gp0151149, Gp0151146

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences