Sample 3300011327

3300011327: Marine microbial communities from the Southern Atlantic ocean - KN S19 NADW_A metaT (Metagenome Metatranscriptome) (version 2)

Overview

Basic Information
IMG/M Taxon OID	3300011327 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0114292 \| Gp0125915 \| Ga0138398
Sample Name	Marine microbial communities from the Southern Atlantic ocean - KN S19 NADW_A metaT (Metagenome Metatranscriptome) (version 2)
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	129884830
Sequencing Scaffolds	52
Novel Protein Genes	52
Associated Families	32

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	28
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → unclassified Pelagibacterales → Pelagibacterales bacterium	8
All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium PRS2	2
All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia	2
All Organisms → cellular organisms → Bacteria → Proteobacteria	1
All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED161	3
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1
All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	2
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium MarineAlpha1_Bin1	2
All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1
All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Marine Group I → Marine Group I thaumarchaeote	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Marine Microbial Communities From The Southern Atlantic Ocean Transect To Study Dissolved Organic Matter And Carbon Cycling
Type	Environmental
Taxonomy	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine → Marine Microbial Communities From The Southern Atlantic Ocean Transect To Study Dissolved Organic Matter And Carbon Cycling

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	marine biome → marine water body → sea water
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline)

Location Information
Location	Southern Atlantic Ocean
Coordinates	Lat. (^o)	-28.2362	Long. (^o)	-38.4949	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F001679	Metagenome / Metatranscriptome	653	Y
F002359	Metagenome / Metatranscriptome	567	Y
F003733	Metagenome / Metatranscriptome	471	Y
F006550	Metagenome / Metatranscriptome	370	N
F006551	Metagenome / Metatranscriptome	370	Y
F020371	Metagenome / Metatranscriptome	224	Y
F021393	Metagenome / Metatranscriptome	219	N
F024127	Metagenome / Metatranscriptome	207	Y
F025846	Metagenome / Metatranscriptome	200	Y
F031929	Metagenome / Metatranscriptome	181	Y
F032684	Metagenome / Metatranscriptome	179	Y
F034336	Metagenome / Metatranscriptome	175	N
F040684	Metagenome / Metatranscriptome	161	N
F042932	Metagenome / Metatranscriptome	157	N
F050311	Metagenome / Metatranscriptome	145	Y
F052659	Metagenome / Metatranscriptome	142	N
F055787	Metagenome / Metatranscriptome	138	Y
F059353	Metagenome / Metatranscriptome	134	N
F060053	Metagenome / Metatranscriptome	133	N
F063612	Metatranscriptome	129	Y
F065855	Metagenome / Metatranscriptome	127	N
F065861	Metagenome / Metatranscriptome	127	Y
F067833	Metagenome / Metatranscriptome	125	Y
F071320	Metagenome / Metatranscriptome	122	N
F072260	Metatranscriptome	121	Y
F076161	Metagenome / Metatranscriptome	118	N
F084352	Metagenome / Metatranscriptome	112	Y
F087333	Metagenome / Metatranscriptome	110	Y
F091007	Metagenome / Metatranscriptome	108	N
F092209	Metagenome / Metatranscriptome	107	Y
F103896	Metagenome / Metatranscriptome	101	Y
F105006	Metatranscriptome	100	Y

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
Ga0138398_1001242	Not Available	950	Open in IMG/M
Ga0138398_1003502	Not Available	587	Open in IMG/M
Ga0138398_1004053	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → unclassified Pelagibacterales → Pelagibacterales bacterium	818	Open in IMG/M
Ga0138398_1020248	Not Available	546	Open in IMG/M
Ga0138398_1020471	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium PRS2	616	Open in IMG/M
Ga0138398_1024937	Not Available	534	Open in IMG/M
Ga0138398_1032020	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → unclassified Pelagibacterales → Pelagibacterales bacterium	769	Open in IMG/M
Ga0138398_1036072	Not Available	501	Open in IMG/M
Ga0138398_1040836	Not Available	580	Open in IMG/M
Ga0138398_1041704	Not Available	625	Open in IMG/M
Ga0138398_1046960	Not Available	664	Open in IMG/M
Ga0138398_1051021	Not Available	604	Open in IMG/M
Ga0138398_1054663	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia	532	Open in IMG/M
Ga0138398_1056044	All Organisms → cellular organisms → Bacteria → Proteobacteria	667	Open in IMG/M
Ga0138398_1056527	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → unclassified Pelagibacterales → Pelagibacterales bacterium	652	Open in IMG/M
Ga0138398_1057789	Not Available	543	Open in IMG/M
Ga0138398_1069367	Not Available	572	Open in IMG/M
Ga0138398_1071804	Not Available	571	Open in IMG/M
Ga0138398_1078175	Not Available	954	Open in IMG/M
Ga0138398_1080045	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED161	528	Open in IMG/M
Ga0138398_1084197	Not Available	584	Open in IMG/M
Ga0138398_1084685	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	833	Open in IMG/M
Ga0138398_1092180	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	503	Open in IMG/M
Ga0138398_1105348	Not Available	591	Open in IMG/M
Ga0138398_1106359	Not Available	585	Open in IMG/M
Ga0138398_1108261	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → unclassified Pelagibacterales → Pelagibacterales bacterium	1415	Open in IMG/M
Ga0138398_1121247	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium MarineAlpha1_Bin1	550	Open in IMG/M
Ga0138398_1121434	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium MarineAlpha1_Bin1	607	Open in IMG/M
Ga0138398_1122250	Not Available	766	Open in IMG/M
Ga0138398_1123123	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → unclassified Pelagibacterales → Pelagibacterales bacterium	698	Open in IMG/M
Ga0138398_1126539	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED161	920	Open in IMG/M
Ga0138398_1128297	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	675	Open in IMG/M
Ga0138398_1132554	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → unclassified Pelagibacterales → Pelagibacterales bacterium	596	Open in IMG/M
Ga0138398_1133198	Not Available	1811	Open in IMG/M
Ga0138398_1134752	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Marine Group I → Marine Group I thaumarchaeote	574	Open in IMG/M
Ga0138398_1136782	Not Available	899	Open in IMG/M
Ga0138398_1141677	Not Available	607	Open in IMG/M
Ga0138398_1146659	Not Available	516	Open in IMG/M
Ga0138398_1161055	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → unclassified Pelagibacterales → Pelagibacterales bacterium	514	Open in IMG/M
Ga0138398_1165439	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → unclassified Pelagibacterales → Pelagibacterales bacterium	707	Open in IMG/M
Ga0138398_1166376	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	509	Open in IMG/M
Ga0138398_1193254	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	557	Open in IMG/M
Ga0138398_1199046	Not Available	508	Open in IMG/M
Ga0138398_1206525	Not Available	777	Open in IMG/M
Ga0138398_1209379	Not Available	701	Open in IMG/M
Ga0138398_1211053	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia	647	Open in IMG/M
Ga0138398_1225170	Not Available	546	Open in IMG/M
Ga0138398_1225497	Not Available	544	Open in IMG/M
Ga0138398_1235213	Not Available	963	Open in IMG/M
Ga0138398_1237053	Not Available	533	Open in IMG/M
Ga0138398_1244526	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED161	630	Open in IMG/M
Ga0138398_1249342	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium PRS2	1652	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0138398_1001242	Ga0138398_10012421	F006550	HFDAVKTAKDKLGTSYYHDAFVDPEFKSLAEDYVSDVKSGGRQRQAALRSSVNSAVDIVNVWETVLGKRDRVYAGKNLAKEIAVPNLLISIDTVTKFTGLEKLDEGMRARVKELPYTRATFTAAKYGLKFIIHEEARLKNVHNVLQDSIQVASTKIEQRQSFDVIDVVETNAAQAAIAAWDTFVSSTDRSTGDPTVDIGIASLNIEGTGVGGKMNRVGMHQLTYAKFTGNTFLRGVASIGPRDYSYEAGTSELVGIPGIGLVLDNGIKQGDVHCVDTELEPNCALFQGPQRVGSQHDEETGDDKYFIIDYHLAAKI
Ga0138398_1003502	Ga0138398_10035021	F060053	AGTITRETIISTRRIPVAASESISKGQVCELVSGYLKKSPVAATVDVNHFVALEAIDNSGGSAGDLSAPVAVSGHYVTVVADGVIRPGARLQISASTAGQVITTGGGGNKQIGWYTGKEGGIIAKAATTPFQETFTDDSDFPPVACADGDVIEIYLGL*
Ga0138398_1004053	Ga0138398_10040531	F050311	MKALRTKLCTYAIALLASIGFATSTLAGSSDFSGVWIAAHAELNVVAINGSSTSPGQGVTVAGTGGSDNTETTSGTIGGFAPTAGYEIGFNLPLGDTFFITVGFADGGGQSAAIAKVDDANNTTDVSLHASNPSWWYIAPSISIFDNSAVYFKIGQA
Ga0138398_1020248	Ga0138398_10202481	F105006	MAMNKFTLLNSNGVARPGFYIEIVDFPNGSTPGKALYVDGRGSEDVINFIYNPETDLLDAWHVRSPENKFTMTPVTVTDRVVGLDVRFAHIANFVAHFALDLSTEDEDIVFDVLAPQAYIAEMSAVAF*
Ga0138398_1020471	Ga0138398_10204711	F065861	MGIIIEIRRKISLIYRENCFIFSLRFRVVLFMIRGETIGLNNNSAAIPTLEEGLLHKNKLVLNYLT*
Ga0138398_1024937	Ga0138398_10249371	F055787	KPLNKTEKLVTKSQHTFSTSTPRPNAAVEKIGESQPDFSPILKDARAEGYEGLSQVARNILKGKYYTPTPEEVAGF*
Ga0138398_1032020	Ga0138398_10320201	F050311	MKALRTKICTYAIALLASIGFATPTLAGSSDFSGIWIAAHAELNVVAIDGSSTTPGQGVTVAGTGGSDNTETTQGTIGGFAPTAGYEIGFNLPLGDTFFVTVGYADGGGDSAAIAKVDDGAPTSGTDVSLHASNAKWW
Ga0138398_1036072	Ga0138398_10360721	F091007	MQAKINKREIDYKGQQLWLNPVDKTVYATDGAPTYSFGEVNGTPIYNYDAHFDAVKTAKDRLGTSFLHDAFVDPEFKSLAEDYVSDIKSGGRQRQAALRSNVNSAVDIVNVWETVLGKRDRVYAGKNLAKEIAVPNLLISIE
Ga0138398_1040836	Ga0138398_10408362	F055787	AIETLEKSGGQDFSPILKDARAGGYEGLSKVAREILSGKYYKPSNDEVGQW*
Ga0138398_1041704	Ga0138398_10417042	F032684	MILLCTLRVLAIIDKFKSNFYLFKVMFLPFGIITKNTLKNITQPKITPTDKNANLD
Ga0138398_1046960	Ga0138398_10469601	F042932	EQIVDQEITKSDEEEQASYENTVAKSIDTLADVVQSIAQSQQGVEKAVSEIVERVKALETPSDLPLSPKGTQGGDDVGAKVTAPNDPYPVGDQVGLDSDRRSKNPPKKDPAGLRMQEKPVNKAVEDEPEEVVEESRPEMVTKSQHEFSTETPRPGSAPETVDKSFTKDFSPILKDARENGYEGLSIVAQNILSGKYYKPTPEEIGGF*
Ga0138398_1051021	Ga0138398_10510212	F060053	IPAGTITRETIISTRRIPIAGTTTITKGNVCELVGGYLANSPTTATVDVNHFVALETIDNSGGSAGDLSAPVAVSGHYVTVVADGAIRPGARLQISASTAGQVITTGGGGNKQIGWYTGKEGGTIAKAATTPFQETFTDDSDFPPVAAADGDIIEIYLGL*
Ga0138398_1054663	Ga0138398_10546631	F025846	MVRAVPMVNLTVAMANVSMVHGHVTVIVTALMAQMKPIVLLHHVKTKVCGIVAMANVFQHHMYVMAQVNFVTQAG
Ga0138398_1056044	Ga0138398_10560441	F071320	KIARDDKLYSMASRVPVFDADIPLRESVFFLSNPSSCFRNNPDRLYCSSDCRS*
Ga0138398_1056527	Ga0138398_10565271	F050311	MKALRTKICTYAIALLASIGFATPTLAGSSDFSGVFIAGHAELNVVAIDGTHTDGSTNTVSQQGTTSGTIGGFAPTAGYEIGFNLPLGDTFFVTLGYADGGGESAKIARANSPDTNSDVTIHASNASWVYIAPSISVFDNSAVYFK
Ga0138398_1057789	Ga0138398_10577891	F006551	STDFDATVESASGTIGTNGVLTDDTLRTFLRKIRIAAGKDPNVFLGSHEVYSEIQGLYMPSVRIPNPYGEALVQVDVNGIQTFKGTGVGIHVDSIYGIPFIPSKDAPSNSADSAEIGRLFALDTSDAEGYGYPRIGIQIAIPTEYYEATRRTPAYPFVNNAFVEKGVYRTMGETVCRHFK
Ga0138398_1069367	Ga0138398_10693672	F059353	MGKLSVADANELLDKGIITKDTLAKMQKDGLVSTRTKSVERYIQSDSGSWVTPIFYFRGLGDSKYTVKMTELRTEINKVIEKYTVNKHEVVKLETKSRKNSKGANGK*
Ga0138398_1071804	Ga0138398_10718041	F092209	IGITAVLVILVMTSTLVMADSPTDSDGKSQESGEIGHHFYTSESGEIEKCEGMVYESAEAAKAAAIENGCSGYHEFDKDGTVWYMPDC*
Ga0138398_1078175	Ga0138398_10781752	F021393	EITKSDEDIQRVETEKSFQETVKSGFDTLTDVVQSIAESQKTTQEVLGGLDNRLKALETPSDLPLTPKGTAAGDDVGAKVTVPRDPYPQGTQAGLDDDRSGEDKPISDKGGLKMQKKSDDTELIEKAEHTFSTETPRPNASLETVDKSIKDTSMILKDARAEGFEGLSQVARNILNGKYYVPSDDEVRGF*
Ga0138398_1080045	Ga0138398_10800451	F067833	TVPMEQMKPIVVLHLAPIKVYGIVVMDSVSHQAMYVMDQANFVTLDGVLIVPMAQMKV*
Ga0138398_1084197	Ga0138398_10841971	F105006	MNKFTLLNSNGVARPGFYIEIIQFPSGSTPGQAVYVDGRGTEDRINFLYNPQTDLLDAWHIKSPENKFSMSPITVSNRVVGLDVRFAHIPNFVAHFALDLSTEEEDVVYDVLAPPVHCAELTAVSF*
Ga0138398_1084685	Ga0138398_10846851	F002359	DQILILADRRSDPVTVEALSVGLTALGAHPMELVTEPIGRYGVIPQPVINAMEASDVVIWVWPVFLTFTAAYRAMGRKREESGTQLKEARLKPYFVYFEGGPALLARDYAKFPNKVLWKIAEKVRDVVSAGSVVHITDDLGTDLTATYDGSKLYGMQFRAGDPPGRNHFPWGRCGMYNGSGDANGVVYISAVQGVAGMLEEPMRWEIKEGWVTDVTGGGEVGEELNRMFEEVPGSNKFVEIMFGYHPKASIQHGIEDPMHWELISKMPWAGLGTDRR
Ga0138398_1092180	Ga0138398_10921801	F025846	MPHGSVMDMQTVLMVVMKLTVLLHHVKTKVFGIVAMANVFQHHMYVMDQVNFVMQAGVLTVPMVQMRA*
Ga0138398_1105348	Ga0138398_11053481	F055787	TETPRPGSAPETVDKSFTKDFSPILKDARENGYEGLSIVAQNILSGKYYKPTPEEVGGY*
Ga0138398_1106359	Ga0138398_11063591	F105006	MNKFILLNSNGVARLGFYIEITEVPQNGMPGTAVYSDGIGADDEISFEFNTETGLFDARKMGEPESTFTMRPITVNGRVVGLDIQFSHIPNFTAHFALDLSTESEDIVYDILAPPVHFAEMEDVSF*
Ga0138398_1108261	Ga0138398_11082612	F050311	MKALRTKICTYAIALLASVGFATSTLAGSSDFSGIFIAGHAELNVVAINGSSTTKGQGVTAQGTGGTDNTETTQGTIGGFAPTAGYEIGFNLPLGDTFFITVGYADGGGQSAAIAKVDDGAPTSGTDVSLHASNPSWWYIAPAISIFDN
Ga0138398_1121247	Ga0138398_11212472	F076161	AEAHRFMKSINFSSRYPKTGFRAFAEKPVVKSLLLPQFGGQKMPPQKASIPNRLTAWTVPQIAADPKERSNLLSSPTNPDALTGKPV*
Ga0138398_1121434	Ga0138398_11214342	F076161	SINFSSRCPKTGFRAFAKKPVAKSLLLPQFGGQKMPPQGASIPNLLTAWTVPQTAADPKERSNLLSSPTNPDAPTGKPI*
Ga0138398_1122250	Ga0138398_11222502	F040684	EGKTMKRVIYLIILAMSLTLVFSQGKPCCKNKSGKGKVACKFNRANIDVNKDGTVIEDGTQIAAAGVQCPLSAQNSSINKNNCTNCAKSPWWKFWGKKKGCCNTNS*
Ga0138398_1123123	Ga0138398_11231232	F050311	MKALRTKICTYAIALLATIGFASPSLAGSSDFSGIWVAGHAELNVVAISGTHTDNNAGDADIGARATQGTAGGFAPTAGWELGFNLPLGDTFFVTVGYADGGGQSAAILKANDSATKNDGDITLHASNPSWFYIAPSIS
Ga0138398_1126539	Ga0138398_11265394	F067833	VQTVLMKRIVLLHHVLIKVYGIVAMANVFQHLTFVMAHLNSVTQAGLLTVLMAQMKA*
Ga0138398_1128297	Ga0138398_11282972	F001679	MWRMSWRQEAMKGVEGCDKPGEAVKRALIPGFPNYRMLNT*
Ga0138398_1132554	Ga0138398_11325541	F050311	MKALRTKICTYAIALLTGIGFATSTLAGSSDFSGVWIAGHAELNVVAIDGSHTQTTASHEVGQGTVGGFAPTAGWEAGFNLPLGDTFFITVGFADGGGESAAIAKFDDSKGVADVTLHASNPTWWYIAPSISVFDNSAVYFKIGQANAALKAVGDVTGVPGDISGDMWGIGTTSI
Ga0138398_1133198	Ga0138398_11331981	F021393	DTENSEQVEETITKSAEAEEVETTQRVSTEKAFHDSVKSSLDTLTEVIQSVAETQKGVSDSIDGIDNRLKALETPSDLPLSPKGTAGGDDVGAKVTVPRDPYPQGTQAGLDDDRSGGDKPVSDKGGLKMQKKSEPEDTELLEKSEHNFTTETPRPNASPETVEKSYQTDFSPILKDAREVGHEGLSKVAQNILSGKYYKPSDDEVRGF*
Ga0138398_1134752	Ga0138398_11347521	F087333	GKHTWTNDDATLADGSSGTNATYVTNSVEAGDCLLGFDGLLYRVVSVTSETALEVDRVYEGSTAANEDITRMKLPRHIKITNDDGTGKTLQDLGVFGVTAAERSAGVDNLSAVGEVLVGSCHRTVPAVTVAAPPTNTIALAKVVTADNTIGITNHGFRTGTKLNYLNGSGSSIGGLSEQAYFVIAKETTDS
Ga0138398_1136782	Ga0138398_11367821	F020371	HDAFVDPEFKSLAEDYVSDVKSGGRQRQAALRSSVNSAVDIVNVWETVLGKRDRVYAAKNLAKEIAVPNLLISIDTVTKFTGMEKLDEGMRARVKELPYTRATFTAAKYGLKFIIHEEARLKNVHNVLQDSIQVASTKIEQRQSFDVIDVVETNTAQAAIAAWDTFVSSTTQSTGDPTIDIGIASLNIEGSGVGGRLNRVGMHQLTFAKFTGNSFLRGVASIGPRDYNYEPGTSELVGIPGIGLVLDNGIKQGDVHCVDTELEPNCALFQGPQRVGSQHDEETGDDKYFIIDYHLAAKI
Ga0138398_1141677	Ga0138398_11416772	F031929	GINSTVGLSVNGNDAQLIDVSTEGSALGIPYESSFEYDLAAEDESGESSPSYWLRGVVTPEFAKGAYGIIGYNSDEEVTYGIGYNASDNFKVATELSGDGDTVIRFSYSF*
Ga0138398_1146659	Ga0138398_11466591	F034336	MKINVKVLSAFLLIVNLYAVENPEDVKPTIQNGKGLFVLLDDTSWISQIVAEAYILGTIDGIITRKRPLRALCGNKVDKVLLTIPNGIEIERIISIVHQFLKDNPENLYKPSIALIRQSLLRAFDQYDIAGY*
Ga0138398_1161055	Ga0138398_11610551	F050311	RKNIMKALRTKICTYAIALLVSIGFATPTLAGSSDFSGVWIAGHAELNVVAIDGTHTETTATTETDAGTVGGVTPTAGYEIGFNLPLGDTFFITVGYADGGGDSGKLAGFRDEDNVNTVSLHASDPHWWYIAPSISIYDNSAVYFKIGQASADLKAIGAATGTPNNIDGD
Ga0138398_1165439	Ga0138398_11654392	F003733	MKALRTKICTYAIALLASIGFVTPTLAGSSDFSGIWIAAHAELNVVAIDGTHTNAGTTAAHASGGSENKEVVQGVIGGFAPTAGYEIGFNLPLGDTFFVTVGFADGGGEAAAIAKVRDQNGTADVSLHASNPSWWYIAPSISIFDNSAVYFKIGQAHADLKAIGDVTGSPGNIEGDMWGIGTTSIA
Ga0138398_1166376	Ga0138398_11663761	F052659	FMLLSGNPGTETRSAVFIDGRLISSLPELNYQSIDKLQQGGVPDKVSWMKPSLRGRLRLVKLQAQERNLTIEDLNQSIRSKWVILWAEV*
Ga0138398_1193254	Ga0138398_11932541	F067833	YPSHAQMKPIVLLHHVKTKVYGIVVMASVSQQVMYVMAQVNSVTQAGVLTVPMVQMKA*
Ga0138398_1199046	Ga0138398_11990461	F065855	FIIHEEARLKNVHNVLQDSIQVASNKIEQRQSFDVLAITESNTAQAAIGVWDTFTASTDHSVNDPTIDIGIASLNIEGSGVGGRLNRIGMHQLTFAKFTGNTFLRGVASIGPRDYNYEPGTTDLVGIPGIGLVLDNGIKQGDVHCVDTELEPNCALFQGPQRVGSQHDE
Ga0138398_1206525	Ga0138398_12065252	F103896	VLFGTKVQQRLSMSRTKDSQNPNGDNSLEGLVIDWQFANTERMFDDFVEPVMDYQPTYAYA*
Ga0138398_1209379	Ga0138398_12093791	F042932	ENTVAKSIDTLADVVQSIAESQQGVEKAITEMHNRVKALEKPTDLPLSPKGTQGGDDVGAKVTAPNDPYPVGDQVGLDSDRKGSNPPKKDPAGLKMQEKPVNKAEPEEVVEGFEPEMVTKSQHEFSTETPRPGSAVETVDKSFAKDFSPILKDARAEGYEGLSTVARNILSGKYYKPTPEEIGGF*
Ga0138398_1211053	Ga0138398_12110532	F067833	VKTKVYGIVAMANVFLHHMYVMAQVNSVMQVGLQTVPMVQMKA*
Ga0138398_1225170	Ga0138398_12251702	F084352	MNSPTGVKQFYTEASATLKTYTGSATSVDGVCYLKGVTINPSGTTCNIKIYSGSSAVAANLIYSFKGGTAAGDVYQEYIAANGIRSAGGLYIDLTAATTSV
Ga0138398_1225497	Ga0138398_12254971	F072260	YGMEGIDATFFEPTHKKKLGKYLERCMKKYPGIVIQKEIPNFGNSRKSPELRMYYVGNKYQYSACANENTVVRPRQEGGGFDVPLESLKRRTRSILKKLPKIVMRGKKLPRLLTRLDMGYIVDGKYDPFVNEVEFVPSWYSEDCAHHPDRLIDRSIGDQMVKITKLFVKA*
Ga0138398_1235213	Ga0138398_12352131	F063612	SAPKSVVGGSPADNVTSVTAESGLKTPRRGTGSKEHVYSSVL*
Ga0138398_1237053	Ga0138398_12370532	F024127	MIYKLTPKKSRDVKTLIEAETKKAAILYFAALLHLSAEDLLQIYKIS*
Ga0138398_1244526	Ga0138398_12445261	F025846	MVNLTVAMDLVSMAHGHVTAMVTVLMAQTKLTVLLPHVKTKVYGIVAMANVFQHHMYVMAQVNFVMQAGLQTVPMVQMKA*
Ga0138398_1249342	Ga0138398_12493421	F065861	KGIIIVIRRKISLIYRENSIIFDLPFGVVLFMIRGEIIGRNNNSAAIPTLEEGLLHKNKLVLNCLT*

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300011327: Marine microbial communities from the Southern Atlantic ocean - KN S19 NADW_A metaT (Metagenome Metatranscriptome) (version 2)

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences