Basic Information | |
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IMG/M Taxon OID | 3300013737 Open in IMG/M |
GOLD Reference (Study | Sequencing Project | Analysis Project) | Gs0118633 | Gp0137663 | Ga0117782 |
Sample Name | Coral viral communities from the Great Barrier Reef, Australia - Pocillopora damicornis (fresh isolate) - PDam_DNA_MDA_NLN |
Sequencing Status | Permanent Draft |
Sequencing Center | Australian Institute of Marine Science |
Published? | N |
Use Policy | Open |
Dataset Contents | |
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Total Genome Size | 25608059 |
Sequencing Scaffolds | 6 |
Novel Protein Genes | 7 |
Associated Families | 6 |
Dataset Phylogeny | |
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Taxonomy Groups | Number of Scaffolds |
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Actiniaria → Edwardsiidae → Nematostella → Nematostella vectensis | 1 |
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Astrocoeniina → Pocilloporidae | 1 |
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Astrocoeniina | 2 |
All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes | 1 |
Not Available | 1 |
Ecosystem Assignment (GOLD) | |
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Name | Coral Viral Communities From The Great Barrier Reef, Australia |
Type | Host-Associated |
Taxonomy | Host-Associated → Invertebrates → Cnidaria → Unclassified → Unclassified → Coral Tissue → Coral Viral Communities From The Great Barrier Reef, Australia |
Alternative Ecosystem Assignments | |
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Environment Ontology (ENVO) | Unclassified |
Earth Microbiome Project Ontology (EMPO) | Host-associated → Animal → Animal corpus |
Location Information | ||||||||
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Location | Australia: Great Barrier Reef | |||||||
Coordinates | Lat. (o) | N/A | Long. (o) | N/A | Alt. (m) | N/A | Depth (m) | N/A | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F023365 | Metagenome | 210 | Y |
F023524 | Metagenome / Metatranscriptome | 209 | Y |
F035988 | Metagenome | 171 | Y |
F059829 | Metagenome / Metatranscriptome | 133 | Y |
F073070 | Metagenome / Metatranscriptome | 120 | Y |
F074384 | Metagenome / Metatranscriptome | 119 | Y |
Scaffold | Taxonomy | Length | IMG/M Link |
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Ga0117782_101716 | All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Actiniaria → Edwardsiidae → Nematostella → Nematostella vectensis | 1255 | Open in IMG/M |
Ga0117782_103396 | All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Astrocoeniina → Pocilloporidae | 951 | Open in IMG/M |
Ga0117782_103936 | All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Astrocoeniina | 913 | Open in IMG/M |
Ga0117782_113727 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes | 573 | Open in IMG/M |
Ga0117782_115661 | Not Available | 540 | Open in IMG/M |
Ga0117782_118572 | All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Astrocoeniina | 508 | Open in IMG/M |
Scaffold ID | Protein ID | Family | Sequence |
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Ga0117782_101716 | Ga0117782_1017161 | F023524 | KLYIGETRRRLGDRFREHLRDVELNDKDASKHVVRHFNLPNHSKQHMAVYGLSLHLGSSESRKTLEQKFIFQIGTLNPHGINERFSFN* |
Ga0117782_103396 | Ga0117782_1033961 | F073070 | NRYGHRSGYQLWDNSMVVRNLFLAEEGGKTKVPTHISYEEWDCTALFQATIYARSFATSDSKGHYKTLGELYVKHHKVPLGKFHPTVVSPSGNTAETFALAIDQLRLLRNSLCHSDKSEIDKLTFDQYVQLAKEAFKALGIMTDPIDAVGGLTESDFPTKEVRKLEESFRQETRSYIECLEEVQSSVDKLVAQGNAIAVLEGKRTFSLFPSHSSIAV* |
Ga0117782_103936 | Ga0117782_1039361 | F023524 | MWCYILYNHLYVQSYECRRLGDRFRERLRNVTRNDKATSKPVAKHLNLATYCIQHMAVSGLSLHLGSSESRKTPEQKFIFQISTFNLHGIDARFSFD* |
Ga0117782_106341 | Ga0117782_1063412 | F023365 | ANIGEITEIINASELTLEVGSDVYIMLKNLQVHVGFVENRTATTGAGALYTLGKGDHFFTFTLVLTTPELSSLNNLVGPDSDGDTTSTAWKIVAKDVSAATKTMAATGFLREYDVSKPEEGKIEIDCFIRITGNTITIT* |
Ga0117782_113727 | Ga0117782_1137271 | F035988 | VKQLLETREIPLDKEDCNQTNGECTLITKPVIFIKGIQTRSQLEHYCQVPAATVRNWSKGRYTLRILINPATPKTSQIGVYAKFEGMTEGATGSQWVPLTSKGELEDKMLRCIQDRLQGGNCENIK* |
Ga0117782_115661 | Ga0117782_1156611 | F059829 | VDVSPALNSPTGLVPANVNGPISFRVLEHSFMSAVIGNERPKIGLTTNRCLGYIAETFHPSQRVDTVDPEINWPGMKFNTATILVGQYVPGADGVNDPDLGDYSAANETFWWLNPGPQGDDAYLRLYIAASEAFAFGFTGFKGARDDNQVSGQIQFAGNLTGKAPRYSRGLYGITSA* |
Ga0117782_118572 | Ga0117782_1185721 | F074384 | KHMAVSGLSLHLGSLESPKTQEQKCFFQIGTLNPHGINERFSFN* |
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