Sample 3300013747

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

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Sample 3300013747

3300013747: Oral microbial communities from fossilized dental plaque from Dalheim, Germany - S1-Shot-B61-calc

Overview

Basic Information
IMG/M Taxon OID	3300013747 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0118456 \| Gp0134801 \| Ga0116837
Sample Name	Oral microbial communities from fossilized dental plaque from Dalheim, Germany - S1-Shot-B61-calc
Sequencing Status	Permanent Draft
Sequencing Center	University of Oklahoma
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	64684388
Sequencing Scaffolds	1
Novel Protein Genes	1
Associated Families	1

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Saccharibacteria	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Oral Microbial Communities From Fossilized Dental Plaque From Dalheim, Germany
Type	Host-Associated
Taxonomy	Host-Associated → Human → Digestive System → Oral Cavity → Unclassified → Fossilized Dental Plaque → Oral Microbial Communities From Fossilized Dental Plaque From Dalheim, Germany

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	Unclassified
Earth Microbiome Project Ontology (EMPO)	Host-associated → Animal → Animal surface

Location Information
Location	Germany: Dalheim
Coordinates	Lat. (^o)	51.565093	Long. (^o)	8.849015	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F051211	Metagenome	144	N

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
Ga0116837_1008053	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Saccharibacteria	1002	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0116837_1008053	Ga0116837_10080532	F051211	MKAKKAIRIFEKIRDLPYGTSGSNEVWSCYRKCVLLKQELQHIGITSQLLIGVFDWQDLPIPEHILSLRRQRYERHVILRVFIDGSAYDIDPSIDIGLAPTLPIAHWDGTSSTATMASLKHLRVYRPHSLHERILSRLRSKFFRGNPKEFYTAIDKWLADTRTHQSS*

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