Sample 3300014132

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

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Sample 3300014132

3300014132: Human oral microbial communities of schizophrenia patients from Maryland, USA - ES_132

Overview

Basic Information
IMG/M Taxon OID	3300014132 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0121296 \| Gp0151538 \| Ga0134366
Sample Name	Human oral microbial communities of schizophrenia patients from Maryland, USA - ES_132
Sequencing Status	Permanent Draft
Sequencing Center	The George Washington University (GWU)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	23442404
Sequencing Scaffolds	1
Novel Protein Genes	1
Associated Families	1

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Veillonellales → Veillonellaceae → Veillonella → Veillonella tobetsuensis	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Human Oral Microbial Communities Of Schizophrenia Patients From Maryland, Usa
Type	Host-Associated
Taxonomy	Host-Associated → Human → Digestive System → Oral Cavity → Throat → Human Oral → Human Oral Microbial Communities Of Schizophrenia Patients From Maryland, Usa

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	Unclassified
Earth Microbiome Project Ontology (EMPO)	Host-associated → Animal → Animal secretion

Location Information
Location	USA: Maryland
Coordinates	Lat. (^o)	N/A	Long. (^o)	N/A	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F054110	Metagenome	140	N

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
Ga0134366_100006	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Veillonellales → Veillonellaceae → Veillonella → Veillonella tobetsuensis	36846	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0134366_100006	Ga0134366_10000624	F054110	VNYQPTIKKLLKALQMNGRRYVVDVRQSWSKYDKPCKVYIVNRMYTEEEYKLTFPQKYKKGKTFKQGQLYKKESEYSSTKQHEVLLFLVRTYKGGD*

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