Sample 3300014743

Basic Information
IMG/M Taxon OID	3300014743 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0121297 \| Gp0151573 \| Ga0134401
Sample Name	Human fecal microbial communities from obese patients in Germany - AS64_12
Sequencing Status	Permanent Draft
Sequencing Center	University of Hohenheim
Published?	N
Use Policy	Open

Basic Information

IMG/M Taxon OID

3300014743 Open in IMG/M

GOLD Reference
(Study | Sequencing Project | Analysis Project)

Gs0121297 | Gp0151573 | Ga0134401

Sample Name

Human fecal microbial communities from obese patients in Germany - AS64_12

Sequencing Status

Permanent Draft

Sequencing Center

University of Hohenheim

Published?

Use Policy

Open

Dataset Contents
Total Genome Size	72100148
Sequencing Scaffolds	18
Novel Protein Genes	18
Associated Families	18

Dataset Contents

Total Genome Size

72100148

Sequencing Scaffolds

Novel Protein Genes

Associated Families

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	15
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Rikenellaceae → Alistipes	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Eubacteriales incertae sedis → Gemmiger → Gemmiger formicilis	1

Dataset Phylogeny

Taxonomy Groups

Number of Scaffolds

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales

All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Rikenellaceae → Alistipes

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Eubacteriales incertae sedis → Gemmiger → Gemmiger formicilis

Ecosystem Assignment (GOLD)
Name	Human Fecal Microbial Communities From Obese Patients In Germany
Type	Host-Associated
Taxonomy	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Human Fecal → Human Fecal Microbial Communities From Obese Patients In Germany

Ecosystem Assignment (GOLD)

Name

Human Fecal Microbial Communities From Obese Patients In Germany

Type

Host-Associated

Taxonomy

Host-Associated → Human → Digestive System → Large Intestine → Fecal → Human Fecal → Human Fecal Microbial Communities From Obese Patients In Germany

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	Unclassified
Earth Microbiome Project Ontology (EMPO)	Host-associated → Animal → Animal distal gut

Alternative Ecosystem Assignments

Environment Ontology (ENVO)

Unclassified

Earth Microbiome Project Ontology (EMPO)

Host-associated → Animal → Animal distal gut

Location Information
Location	Germany
Coordinates	Lat. (^o)	N/A	Long. (^o)	N/A	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Location Information

Location

Germany

Coordinates

Lat. (^o)

N/A

Long. (^o)

N/A

Alt. (m)

N/A

Depth (m)

N/A

Location on Map

Zoom:

Family	Category	Number of Sequences	3D Structure?
F041208	Metagenome	160	N
F042910	Metagenome	157	N
F043413	Metagenome	156	N
F051934	Metagenome	143	N
F056623	Metagenome	137	N
F058154	Metagenome	135	N
F073573	Metagenome	120	N
F073574	Metagenome	120	N
F073656	Metagenome	120	N
F077319	Metagenome	117	N
F078693	Metagenome	116	N
F082714	Metagenome	113	N
F082715	Metagenome / Metatranscriptome	113	N
F087213	Metagenome	110	N
F088920	Metagenome	109	Y
F090515	Metagenome	108	N
F101192	Metagenome	102	N
F101193	Metagenome	102	N

Family

Scaffold	Taxonomy	Length	IMG/M Link
Ga0134401_100560	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	7400	Open in IMG/M
Ga0134401_100878	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	4525	Open in IMG/M
Ga0134401_101313	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	3326	Open in IMG/M
Ga0134401_101986	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	2620	Open in IMG/M
Ga0134401_102281	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	2430	Open in IMG/M
Ga0134401_102582	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Rikenellaceae → Alistipes	2249	Open in IMG/M
Ga0134401_102681	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii	2204	Open in IMG/M
Ga0134401_103001	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	2052	Open in IMG/M
Ga0134401_103318	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	1923	Open in IMG/M
Ga0134401_105766	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	1378	Open in IMG/M
Ga0134401_105981	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	1348	Open in IMG/M
Ga0134401_107062	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	1222	Open in IMG/M
Ga0134401_108853	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	1059	Open in IMG/M
Ga0134401_112094	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Eubacteriales incertae sedis → Gemmiger → Gemmiger formicilis	864	Open in IMG/M
Ga0134401_114742	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	754	Open in IMG/M
Ga0134401_115847	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	717	Open in IMG/M
Ga0134401_118332	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	647	Open in IMG/M
Ga0134401_121184	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	581	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0134401_100560	Ga0134401_1005605	F051934	MGLMRRLAAAALAAVLLLSTALCERVTFRLSADIDPVQYPAQERKLAQGLKSLFRLLTVEGDVVASDGSFDARIDLGLTNAPEKTATRIRFFGLDSHWGIQSTTLGGETLMVNQLAWLEFAIKAYNHLDLPLQRVFLWLSPYAHTSAWAGIRQAIADLTVQENDGRLENTALIACAEEIARLSEDDRALYYYIEAFGLESGTDADIFDTLATLPEYVEANFPDGLSIEHTENGVSWQNGEKTVFSYADADGTQVVSLHLPDLVDFSATLRRDALLFTGALSLQSDVLNADVSFSLPASYPVTLPFYTQIDADGMMTGDDGIHLAFEGEVQGDTITIRRIQPDHSATMMTLTVKVIQVAEGTVKYAPEDVQGTNVLSVDGPALAELMGRIGKPMVRKVTQWLAALPAELVQGAMDAMEDSGLLGTLTDAILNGEAGED*
Ga0134401_100878	Ga0134401_1008781	F056623	MKSTEEMLQAAVQQLQTAEQARLTSETDPARRQLLHLLYAREAAALQSMTLVRAEIPATQKRDWKPLIFPLAAAVLNLGALALWLTLPNCVTPENSGWMGRFALCIVAQSVSLCAAIGSIVSAMRRKPPKPVAVADEPELRRRLVEAEGRIALDAQTIEALFAQESVTIISTGAETAAELYASLYEMAQDARLDGDANQEKALSWPLSNAKRLLNAVGCEAVDYAPETAMFYDVMDADITQQRRPAIVQKADGIVQQRGLYLRKG*
Ga0134401_101313	Ga0134401_1013132	F041208	MRKILAMLLSVMMLLTAAVAETSAPYAPETVLPLVANNRPYRDFARGAISSSEDAIEQAKAWLYLPLFVTNFSAKSEAVDWSAMRAEEGWYVTAYMRNTFVWLLMDEQGRVQAYDFDLLGNASLTYDGALPDNLDEAISSYIRRFADLNGFVEVADYAREEVTTFGDYAVAVTVQVTLDGTPYRFTMRLDMMAFTSVENANLHPTAAQTQRDILLLMRDNLAEKGVDITQTFFAVQADDADGETNLTGIASFPADAASDAIREQYGELERYTLHYSGRASEAGIERVELSDWQETTATAQFPLALYALVDGKYLVPDGELAAGTAYLALDSMGLRGRNVIPLESITMLTRIRYARADGTFAESWVSSDTLTENDAAPAAPKREPIPTLESYQITLSGTAYTAFAINKVEKGYDTFADIAGTQTAVVDVLTSAAQGVIAEYGVDASDLLCHTVVEYGYRADKGCWQVDFTIPQRDMADDAYEVEVDDKDGKVTGMWGPQDGNG*
Ga0134401_101986	Ga0134401_1019862	F058154	MKNRTFQRLFPLLRMGSILLAAVLFCAALIGVNAQLTVGTNEERNLATYLGLALTAVVTYLLQDVPKMLVGRHFGWKLVRYEAFGRVYQADGTGAFVRVPVPAQSRLRYQPYLLPPEDAPRHDVTLYTLCPLLYGGALAVVFGVLTLLTLGQPVSLVLCELAMGGVVLVMTCILPMDERFIASPMAIARMLRDPEQLAEWLYFARMKANGGVEVTDVSIENIPQPATVKTCQDAICVFQRAQIALMGQCDAQKAYGLMKQVLESEARLSYTAWKLLLSDGVVAELLAGEPGEFTALYRGKAGAAIRQVMFRMVDYALPAYAVAMLVTHEAREAEVVRNTLAPVREKMPELDALMKAIEEKAARIES*
Ga0134401_102281	Ga0134401_1022811	F082714	DEGRELVMVVGIRFAADAPVRTVLQAFLPIFSTVDVDFLVREYWVCTFGNGLPERRFTAQEMRRAVDALTPDEHAELFTIYVLPHDAPDTPPSSCEDFCARRFTMAFYAYDGDGYALLAQSEEQVEAVIETLRKAVEIRSVEAVECETLARWAF*
Ga0134401_102582	Ga0134401_1025823	F073656	FTDYAANRGEIPSVLFFDIRTTDAALLPRIEAAEHSYLLDPSTATEKLDIRHAVTLKDLLYCYKYDLDPLAEGNCGNMLSTKADYRQFRNEGLPPVAREDLRRCRAVETERGTVLFTQEPDGREACERYMQHHADCFFDPDLGVETLRVYEVEVDPDGFWDKVNPQVLPTAGGMMWVPEHPFVDAEVLRRGYCLKEYDMRATADNFWAFADPQHGENLYVSNGIRDLTGLQIIMQRGYGYLMQNAERYWNREFVFRSGFDNIERKDAPDLSDEGRAAKREEQYNLAAYILDRKFPIRRRPSSEIPPMQTQGIRTFRNFDAINLLFRPDKLLEAYQRRRDEPVRGAEFHLKRH*
Ga0134401_102681	Ga0134401_1026813	F078693	MVRAPVRGAERSFIKADCSLLMSKENQKTTSDFDALDPRERGCSPLSDPKEEVETEKS*
Ga0134401_103001	Ga0134401_1030012	F073574	MLLPAAVRPYAADVDGTASRVRCAIALNGSKELHIQLCGRLKRGLFGRNQLLADGNVLCVALHQPDGDVPLFDSRCDGYANVLDDRQTPAPIPLHPAICPKCRNAAFQLRLTFEYPEAEELAAFANPDDMFTWVWVTMRCTRCHAVFRGDFTAD*
Ga0134401_103318	Ga0134401_1033182	F042910	LADRLYCALNGTTLHDLDARIHLLDVEELAPAVRTVTANRIGGGLHLLRRQREQLSLRVRFLIEEYDIAARHQLLHLVAAWAEAGGVLTLHEDGKRVLRVVCTQYPTMSTLNWLETLSLVFTAFSCPYWEDAAEPSFLMPNTSDAPSKLLAVPGDAPETPLNLLIRNIGDAAITALTISAAGKISFQGLTIAPGAAIRIHHDAGVFAAEMVSDDSTVSILPYRTPDSADDLLLRPGVLNEIRVEAGSAAFVSGRCKGRYC*
Ga0134401_105766	Ga0134401_1057662	F087213	MKKFSSVLLAVLLIFSCWTAATAESTDAVSGAPLDNDIEIVYKEHFDDMVTHYAXXXLLVSADVYDAIGMIRFDSEDSLAARQRIYGIASADDLHAILTGYFDPNDAAYTADAALDARLQAILAACGLNPEDYDISVIRNLGGMIEPITGTNWYCTLIRKGVEVAEDETNPYDMVIVLYGDEMTVGAFVLNPEV*
Ga0134401_105981	Ga0134401_1059812	F043413	MLMMLTAVGVAAAKLASVTDYPPPSGLTPEYMSHLVTLNEAYDGDLLTLSVNDLVFDGTTVEVAMNVQPKAGKQVFMDMEVTAECEGQTYTLEIEGCGGGDFMSGMFLPDETDSWSDSPFAFDGVLWDDDMQSPPEGAPIAWTMTFELLQPVWEVEYLPDAQYQALLAGGVDTLEAYVQNNWRQQIITVTYGSLVEYQYAAEAAMLADGTITEPLSGSRTEQLLSCGGFRRADTIIVQFTTDFADEYAHPELVGKRIGMGEYDLVIDNVNLSFMRANITMHYEFPAAYTEDEICQMTNLPNAWRVYVNGQTEAGYDAYANFQQVTNGAYGVDTPEQLTVGFDFYPAETDITRLTFVPIRNMGERWDACHPDAEKGFTLELQE*
Ga0134401_107062	Ga0134401_1070622	F101193	MARKCTEYHYFQHTYWDAMARYNWTRCPHCGKLCKPSRFKAATVLVPIELVIFVVCIFFRNSMNDAIGWFAAWLLFVLLLFLPHYIYVRFFMPYETLSEDETQKFRDLQEH*
Ga0134401_108853	Ga0134401_1088533	F077319	VQEKRGGQKIMLIRNATLQMSATERACMDVRVMNGCVWEMGVALVKGLYESEIDLHGDVLMPGRMLETPVPAADEKALRLLCRKLYREGVRYFVADCPADALLRVQNRPERRGALPVTALPNPEPLRSGTGMPLTRWTAAGEFVGMMDEHSGD*
Ga0134401_112094	Ga0134401_1120941	F090515	MIRSIRGACQEGVTTCCKAGPKAALQGTAPGRVACLEFAGGEKRKTNIAADYAVKVPAFTALLCRHIGSIRTFLKS*
Ga0134401_114742	Ga0134401_1147421	F088920	VSANLHHYPAFWAGLILHLILHFSKKAAIFAPKRVILLIFVPTLFFCCGAVLSLHTSSKISGQTSLYQPWLSPYC
Ga0134401_115847	Ga0134401_1158471	F082715	MMKFMKRALSLLISAMLLLGCFGLAEEAPLLPIAIVSYDLTDEATTAALSALIEPKENALTRWERVVLSDGREAWVICQFDQTTMSNAWSRVIDAETQEVLQEDTTDTGFFATAQARWESAKGIYALWSIQDKMLFDRLYAMAPCYGEPVEGDLTQEEALAAALNVTGLTAADYDAVGYGYIMGSSEQNGTWQVFFVKGNDVVSTVNLDARDATILLVEPDEEGNG*
Ga0134401_118332	Ga0134401_1183321	F101192	VNIVSVTFGGCGATMQTEPSDKEGRNMTYRGWLLVDIALLLTALSGTQTSLCQRMRSVPVYRGLTYWEVQQIAKAAPTSITPCGEDTIRRWVSGRYQIALRFNRYDVCLGVEEEIDG*
Ga0134401_121184	Ga0134401_1211841	F073573	RFPNEAPPLNLSAFDRAGYTYAENFRRNERCYEAEQCEVTSDDGSVVLSLDVRVRPRGGEIEALPRVMLSVYSEGMPFQVRRMELRTGDTTYAILPDNVQQYTMRGDTDGGFLETMAIPLGKVGMKMLLEASDAAEARWVIQGARTAQTLPLTAAQKKAIHRFCMDCEESAITYQPAFLWYKDYCTKA*

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300014743: Human fecal microbial communities from obese patients in Germany - AS64_12

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences