Sample 3300017489

3300017489: Metatranscriptome of marine eukaryotic communities from Gulf of Mexico in f/2 medium with artificial seawater w/o silicate, 18 C, 28 psu salinity and 318 ?mol photons light - Lingulodinium polyedrum CCMP 1738 (MMETSP1032)

Overview

Basic Information
IMG/M Taxon OID	3300017489 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0128947 \| Gp0212148 \| Ga0186436
Sample Name	Metatranscriptome of marine eukaryotic communities from Gulf of Mexico in f/2 medium with artificial seawater w/o silicate, 18 C, 28 psu salinity and 318 ?mol photons light - Lingulodinium polyedrum CCMP 1738 (MMETSP1032)
Sequencing Status	Permanent Draft
Sequencing Center	National Center for Genome Resources
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	78941632
Sequencing Scaffolds	38
Novel Protein Genes	43
Associated Families	35

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Eukaryota → Sar	6
All Organisms → cellular organisms → Eukaryota	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	10
All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Chrysophyceae → Chromulinales → Chromulinaceae → Spumella → Spumella elongata	1
Not Available	2
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Gonyaulacales	2
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Gonyaulacales → Pyrocystaceae → Alexandrium → Alexandrium catenella	1
Rhodophyta	6
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Peridiniales → Endodiniaceae → Brandtodinium → Brandtodinium nutricula	3
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Gonyaulacales → Goniodomataceae → Pyrodinium → Pyrodinium bahamense	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	2
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Gonyaulacales → Pyrocystaceae → Alexandrium	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Gonyaulacales → Pyrocystaceae → Alexandrium → Alexandrium monilatum	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	The Marine Microbial Eukaryote Meta/transcriptome Sequencing Project (mmetsp)
Type	Host-Associated
Taxonomy	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated → The Marine Microbial Eukaryote Meta/transcriptome Sequencing Project (mmetsp)

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	marine biome → marine water body → sea water
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline)

Location Information
Location	Gulf of Mexico
Coordinates	Lat. (^o)	27.8	Long. (^o)	-97.13	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F000076	Metatranscriptome	2620	Y
F000085	Metagenome / Metatranscriptome	2467	Y
F000115	Metagenome / Metatranscriptome	2137	Y
F000342	Metatranscriptome	1262	Y
F001154	Metatranscriptome	763	Y
F001544	Metagenome / Metatranscriptome	673	Y
F002609	Metagenome / Metatranscriptome	543	Y
F003183	Metatranscriptome	502	Y
F004926	Metagenome / Metatranscriptome	418	Y
F005748	Metatranscriptome	391	Y
F012119	Metatranscriptome	283	Y
F013530	Metagenome / Metatranscriptome	270	Y
F016002	Metatranscriptome	250	Y
F018723	Metagenome / Metatranscriptome	233	Y
F020362	Metatranscriptome	224	Y
F025290	Metagenome / Metatranscriptome	202	Y
F030772	Metagenome / Metatranscriptome	184	Y
F034578	Metagenome / Metatranscriptome	174	Y
F035774	Metatranscriptome	171	Y
F036711	Metagenome / Metatranscriptome	169	Y
F045108	Metatranscriptome	153	Y
F049390	Metatranscriptome	146	N
F049393	Metatranscriptome	146	Y
F050131	Metatranscriptome	145	Y
F052607	Metatranscriptome	142	Y
F056219	Metatranscriptome	137	Y
F058161	Metatranscriptome	135	Y
F062433	Metatranscriptome	130	Y
F064389	Metagenome / Metatranscriptome	128	Y
F064392	Metatranscriptome	128	Y
F067800	Metagenome / Metatranscriptome	125	Y
F071920	Metagenome / Metatranscriptome	121	Y
F074386	Metatranscriptome	119	Y
F088217	Metatranscriptome	109	Y
F093247	Metatranscriptome	106	Y

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
Ga0186436_1002110	All Organisms → cellular organisms → Eukaryota → Sar	2501	Open in IMG/M
Ga0186436_1004562	All Organisms → cellular organisms → Eukaryota	2076	Open in IMG/M
Ga0186436_1007780	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	1781	Open in IMG/M
Ga0186436_1012968	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Chrysophyceae → Chromulinales → Chromulinaceae → Spumella → Spumella elongata	1495	Open in IMG/M
Ga0186436_1013644	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	1465	Open in IMG/M
Ga0186436_1014273	Not Available	1438	Open in IMG/M
Ga0186436_1014871	All Organisms → cellular organisms → Eukaryota → Sar	1413	Open in IMG/M
Ga0186436_1015313	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	1395	Open in IMG/M
Ga0186436_1020142	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Gonyaulacales	1223	Open in IMG/M
Ga0186436_1022068	All Organisms → cellular organisms → Eukaryota → Sar	1162	Open in IMG/M
Ga0186436_1022515	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	1149	Open in IMG/M
Ga0186436_1024098	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Gonyaulacales → Pyrocystaceae → Alexandrium → Alexandrium catenella	1102	Open in IMG/M
Ga0186436_1025254	Not Available	1070	Open in IMG/M
Ga0186436_1027168	Rhodophyta	1018	Open in IMG/M
Ga0186436_1027468	Rhodophyta	1011	Open in IMG/M
Ga0186436_1027625	Rhodophyta	1007	Open in IMG/M
Ga0186436_1027660	Rhodophyta	1006	Open in IMG/M
Ga0186436_1027678	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Gonyaulacales	1006	Open in IMG/M
Ga0186436_1027962	Rhodophyta	998	Open in IMG/M
Ga0186436_1028096	Rhodophyta	994	Open in IMG/M
Ga0186436_1028135	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Peridiniales → Endodiniaceae → Brandtodinium → Brandtodinium nutricula	993	Open in IMG/M
Ga0186436_1029015	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Gonyaulacales → Goniodomataceae → Pyrodinium → Pyrodinium bahamense	972	Open in IMG/M
Ga0186436_1029323	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	965	Open in IMG/M
Ga0186436_1029348	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	964	Open in IMG/M
Ga0186436_1031825	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	906	Open in IMG/M
Ga0186436_1034231	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	850	Open in IMG/M
Ga0186436_1034351	All Organisms → cellular organisms → Eukaryota → Sar	847	Open in IMG/M
Ga0186436_1038037	All Organisms → cellular organisms → Eukaryota → Sar	768	Open in IMG/M
Ga0186436_1040672	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	715	Open in IMG/M
Ga0186436_1041399	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Gonyaulacales → Pyrocystaceae → Alexandrium	701	Open in IMG/M
Ga0186436_1043471	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Gonyaulacales → Pyrocystaceae → Alexandrium → Alexandrium monilatum	664	Open in IMG/M
Ga0186436_1043951	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	656	Open in IMG/M
Ga0186436_1045187	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	634	Open in IMG/M
Ga0186436_1046192	All Organisms → cellular organisms → Eukaryota → Sar	617	Open in IMG/M
Ga0186436_1047718	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	592	Open in IMG/M
Ga0186436_1047923	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Peridiniales → Endodiniaceae → Brandtodinium → Brandtodinium nutricula	589	Open in IMG/M
Ga0186436_1052501	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Peridiniales → Endodiniaceae → Brandtodinium → Brandtodinium nutricula	520	Open in IMG/M
Ga0186436_1053729	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	502	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0186436_1002110	Ga0186436_10021101	F013530	VSCEKFTEFLQGLKDLELADGQASKLCEHIAGEASEISKERFLELIKLYYKCVKGTVLSEDISIKSKTVRRLEVGEVLEALEGPAKEENAGVQRVRCMAVQDDATGWVTIAGNQGTSFLEPGGNFYSVVKETLLTDGLSVQDSKTVRRLAKGEVIEVLEFQKKDASVDVKRIRGKAKLDGASGWITVASNQGTIFLEPC
Ga0186436_1004562	Ga0186436_10045622	F025290	VRFGGCPPTKPATKARKREIFGKTVVVKAKPARKVVKAFPVAALKKSL
Ga0186436_1007780	Ga0186436_10077802	F062433	GSSLGRLVARIAGSLREREADARRREAEAKETEKLLARAEGELQQLISVVSQLHGLQQCSGETLPGTAHLGPERPRPCPKPPFFWQPSQEYADEFEVSGEHAEVVTKTKDFEDQGWVIPVGGAWRLVRGGLYRWTIRIERKCPSRPQLQLGIHGANHGQPWRLITTSRCSWSRDDEPWRDRPGGDRLIDEGDFVHLEADLRGDGSRCGSLALAINDEPFEVFFEDIPLATPYPLMPVVSMGGGESRVRLCPSY
Ga0186436_1012968	Ga0186436_10129681	F002609	TLTFGLPFSYIAIQNIYICHDVMHGATFPPYTWQKYLTHPFSDFFSLSWEEFVLEHNRHHASTVDLLQQGEFGWDPEEFQYAMLEWTWRHKKYPFPIHPFGLLFTGALLPVIHFFGLNDTGALFAMEWYCHFPEEGAGGKCNKEFWKKWFPRRLAHHSFVACLWACVWLLGTWPLGRPLSEGWRFMFTVSCFSRFGFTAAWMFITNFTHSHPWNKFLAKDPARTWPLLHDTMAFILGGKHRWNEMLFHDLHHAFPNAVGTLSQRGRFHGWQKVHDAAVEVLHNGLWKPNGDEETDMQKTQRARSVLMKSRMKK
Ga0186436_1013644	Ga0186436_10136441	F064392	EAEDEPPEVIVVAGRNKDRENQDLQGEYHRIGVHHGRPAYRKPGTRTCIRYWPAADRWLIDREGLQESDICNAYAEQGGKRHPAYDDLVWRVWETQHRQHIRDPELLVTAAPSCIQVIGRACGKENWALNGEYKLVGLHQGRVAYQKAGKLKHAIRYWALGDRWLIDLEGLRDVDVCNAYADAQGSQHPGHVGLAWNVWDSTRGRHAVDSCLQSIVAPAVIELVGREPPKENVSMNGSYHIFGMHAGKPAYLKADGNGHALRYWPREDRWLVDLDGLRDADVCNAYAEAGGHDHPGDLKIVWHIWETSRGRHLTDPAVRTFVAPHWVRIAGRDPYKENSSINGDYELVSIVEGKAAYRKEGTDHAIRYWPSEDRWIIDLEAGFHGGDIANAYADAKGAENPGNCELLWHVWETARGRHVADEDVIAEAIWLPTPDWSKVPGARPNMLEASGDADGIEARHGGG
Ga0186436_1014273	Ga0186436_10142731	F088217	GMLAPASLCRCICGTGRRENFDGRQGGDLEQEAEETSPRQQLPEDIGLLSYYVMVDQPLRGVPIREGDLWYLSAEESVDPVTLSLYVNGFAFVQGKSEISISLSPFALVRNCKFQSTYTNNLNLADFKIFKVSLFTQGICYYFGVKNEDERQAEDERSRWVLDFSRAMRLVTQSLFPPFSISCDPIESIASTQRRLMAGYLIHHEDASLASVLYCELHPHCDDQAKLTLYENELCNTPVMDIYITERSVCCEKVGINCSCFCVEDHQFGTRTLSERKLWLRAISNVKVKLQNRAPSPTLEEIKHYRLAIKEHIDTIRATLVSKAPTDALLRRSAPKASLQAAEAGAVSFPPAPSGGLPEEVSEQQDSARGQQREGGQQAAAANDTGEPGLSGKLDLLRSPTTCPAREGA
Ga0186436_1014871	Ga0186436_10148711	F001544	KAAPRPKARAAAKKRVMKAVKTKRVESHRPLAPHKSACAKKVRIGILVGKDFDPVKKGTQWPEYPEKLVLTDEDWGKYSIDAATALRMQQLHPDLLELDIMYGKEVTQKRLQKNHVNITFWYEGGVALLSGDKKHFDEVMRCQKNPECRLDPSWDYYNWVLCKPNYMEQCMKAGIPMIPTVIYKNGFDPKQCMKDVQKMGWDKFFCKVGHFTFFGAGAINGKTEDFLGKRAKDLEAYAEENKGSKTFLLQPYMMKPNGQVFDEVRNFFIDGHWRYSVFTHGTDESDAGYYEEPEGPRKAACRALAERAYQEVLKAATWQGKRQTPLLNRIDIGVIPKKGGDSLHKTDNTYFVNEVELIATTWLDRYAPISVSDVVAQAAVKHALELLAGLLKAKRRVPDEAHVRRVVKTLNERIGPFKHINI
Ga0186436_1015313	Ga0186436_10153131	F064389	PGAGGGEPAGDPPLGGAGARPRPRGPDSRMTLQRVSFLDFPWVLDYILATRFNCSLKQIRHAVCSIVLTLRTILSAAVELGILVSQDSDVDGAVSAKPFIDNMIHVITECLQNFPLCLDSEFFHSFLEPLPSHLRFLCGNFHPLTHMQFEDSAKQKAFEAQTRAITQALSELPSQCSSLELYMSSQEPVLKQIQLIKEHLRAPLWMLMHDFRSLQAEEQLLVEDVREAVRAVAELQAREPEAGAWPQWPQAMGETLLLLLPLWKLSALAVAKGQEALMRKVAEPPLGANLGTQRLLQRLIEVLLSDKVDFVDILLWFAAEPSSAALLSSGEAVEFLLPEAANDEEFTQFRKDGLLRIQENIAVLQNHIIRLPKPLRALVSAHWRKVVEEVHLYLQLYLRVIEAFLEVQKDVRSFVHSHLFIEVTLGLPLMTWLAPEGRGPCAWGRPLPALAA
Ga0186436_1018913	Ga0186436_10189131	F034578	VAECGPPPQGLLDRLADDVLQEERRMRDAQAAGEGPMFSTVLCHSLYALAAMVPLHPEAATNSSVRGAAFAQLMKVQQIVARSIQPQALFDLADEGRAKLFLYIRAITCIRLALRVITGSWFAADIGVQFAISEQGGRDFMQYCTKHITQVYNSKTAVMRLLGTPWERVMLSQGPTETMAELLLVVCSSDSNLLELTQLGGEQALQSLSQYAERPQVRQQATMLLSKLAVLQA
Ga0186436_1020142	Ga0186436_10201421	F052607	LPMFRNGLDQKCPGLKLACVPHIGHFNDGLDCKLARTLAAVRFTKDPHEKIPVEGFDLLMRRDNVMDIEVYLALYDMQDLRDWLYKTGRPYEVNLLFHAWAFPQLLYRGEAETTVEAAIFESSGVFAMADAPEGATRGLRKFGQRIWVKDKVYMCMGPDSIRCRVDRHRLVCTFWSLCIPVGEERAVVTKHALLNETHTHISKEIGAACAELSDASVGNVLQHLQKLLTVVQNATHRLSRLMGRCEGAFEGVFLDGGTSGQRYQGATEPMEVWEEQLALLDRSINDGHKVVERPAPLLSEMIRLRVYEELGRKRRKGKFPADDQETIDIGAKAFMTPAGAAGGERARAVHQVLVECIHDLERLAESNAEMLAVEGVTA
Ga0186436_1022068	Ga0186436_10220681	F000342	QGAGGRQRNVVARAAGSRRGLRPQGAARAMSKPYNTFGMQPSFERHGGPQQLPAGGPMEARAPGSIFTPGKRRRMNLVAIVVNIFMPWLTFAALYAVMSFSFHYQHPAAAWALVGVGFLVAIMAGFLAQRTMARERDPMWYTFAAIALFLAVVAAMVFGDMNFWFNMQPFYDIENLNTYPSVNPAREKGQQLMDSGRVYFADGTGLDMRKAMGFKNLDLYCVAPIVHGEEQLASYDFWAVGVNCCSGVSSDFRCGEFNNPHARSGLRLMRDDQRPFFRLAVQQAEAAYNIKATHPLFFYWMQDPVAEMNSYRDDGFKYYLLGIFTHFAFNLFCVVCAVVLFSKIGRY
Ga0186436_1022515	Ga0186436_10225151	F074386	PTTPITLDTLQGEWVNSVGAKIKVTGTEVSLNGIVMKVHPVTLNGDGTVASIGRIWQLRGWMEDERIEFKEAPSREVMEYARSVVWTKATTEYMVRWTEQMKGLGYAGSSQDPLGRGIEGCCPGTCDAKAKIAADDANRDKEELALLNKLISEWRIPGMEVVPPRKVVPDFSNRGHTGLSVEHVHYLATSFKEKGFQKRRGNAGHDIPVLVRESATSDLGKKSIQNWRSKLADEPGFPPKEHYERLFSQPELYTSLGNGHFNQALNLFGNECASIYSDKKYTIGGDAALREAVEEGVSSVVLRAAIPLRDRETISRLLNSKREYKWNVKEDGSLNILDADEDTSTCKQFEALSKVLDAVELNCLVRAELGVKDSHRIGQ
Ga0186436_1024098	Ga0186436_10240981	F003183	WDRKRRCDQDQMPRCAACEGIGGHAWSDKNEDIEMTPCEVVALPPKVNMSTVAPPLYPKAFTVKRKDGKQGGYSDTLIGWKTDPFCFGFFPQNDSIKELCYRSQDAYAKYYDIGREAARTDYNVKLTGAFSVFPNTSAIILQVNDTMWIQNHLWVVDQCICANPSGNHCTKPPCKAYVWHWDTFKDAQYLGRERIGVEWIQHHGTGKSGKMMELDHFILWSHHVWTDPISRRLVRMWKPFNGLQNYDPEAWTDSVEDPSVFDAPPAKCKKGGAKVRINCDDNGNFHPKMSEGLEHLEALHALALRMQQGQQVDLGEQVFI
Ga0186436_1025254	Ga0186436_10252541	F035774	RARGRGARAGRPKGGPRDAGMAGWPLPLFKGCVCDGVEADEDVQRRLKRKGANGVHTAFVGQGAVCPRPLLSPKVQGFPLYSSSPDQPLLGVPIREESLWHLSTQDRFEPVSFSLYVNGFAFTHSDGLEVSICLSPFSLVRNCRFQSGECAKLKSFKVSPQEPEPCCYFAVPSVSEREAEEERSEWVLGISHTILLITDSLLPSLSVTCDPLEGAPCTATRLLAGYLIHREEGSFVSVVFCELQAHSGSTARMVLYENEFCDNPIVEVSISEASVCCDVVGINCSCFIVDCHHFASQSPSERKLWLRALSNVKVKLQSQAPDPTEEELHYYRSSIRETIATLTATLEPPIVSQPLL
Ga0186436_1027168	Ga0186436_10271681	F049390	MFRIVPSGLLGPALGGVAYAVWYLCVALRRLLRLLEPLLQRLRGAPKSPYAGKTVLVTTGRQAKTLHGIRALKDLGCRVVVTDYQEMSASAVSMACDVAETLAPLDPGRVGQWVEHLEAIVRREKVDLVVPMSTINEALFIGVAKDWLARRLPGVSFFCEGLEMMARLDNKALFAEMCNECGVPVPESGTVASRAELEAVVQKLGGDMDLILKRIESTINREEEIKVVPRGEQAPASVQPSPTDPWQWQRFIRGTEYSAWFVCVEGRITFQGCYRSEGDLLFFDGIPVPQDVEAAIAGLVAKHRLTGQYAFDYFRE
Ga0186436_1027468	Ga0186436_10274681	F049390	MFRAVPSGLLGPILGAVAYAVWYLCVALRRLLRLLEPLLQCLPGAPKSPYAGKTVLVTTGRQAKTLHGIRALKDLGCRVVVTDYQEMSASAVSMACDVAETLAPLDPGRVGQWVEHLEAIVRREKVDLVVPMSTINEALFIGVAKDWLARRLPGVSFFCEGLEMMARLDNKALFAEMCNECGVPVPESGTVASRAELEAVVQKLGGDMDLILKRIESTINREEEIKVVPRGEQAPASVQPSPTDPWQWQRFIRGTEYSAWFVCVEGRITFQGCYRSEGDLLFFDGIPVPQDVEAAIAGLVAKHRLTGQYAFDYFRE
Ga0186436_1027625	Ga0186436_10276251	F049390	MFRVVPSSLLGPVLGGVAYAVWYFCVVLRWLLRLSEPLLQRLLGAPKSPYAGKTVLVTTGRQAKTLHGIRALKDLGCRVVVTDYQEMSASAVSMACDVAETLAPLDPGRVGQWVEHLEAIVRREKVDLVVPMSTINEALFIGVAKDWLARRLPGVSFFCEGLEMMARLDNKALFAEMCNECGVPVPESGTVASRAELEAVVQKLGGDMDLILKRIESTINREEEIKVVPRGEQAPASVQPSPTDPWQWQRFIRGTEYSAWFVCVEGRITFQGCYRSEGDLLFFDGIPVPQDVEAAIAGLVAKHRLTGQYAFDYFRE
Ga0186436_1027660	Ga0186436_10276601	F049390	RGPSPVGNQPPAQQCSPAAMFRIVPSGLLGPVLGGVAYAVWYLCVALRRLLRLLEPLLQRLRGAPKSPYAGKTVLVTTGRQAKTLHGIRALKDLGCRVVVTDYQEMSASAVSMACDVAETLAPLDPGRVGQWVEHLEAIVRREKVDLVVPMSTINEALFIGVAKDWLARRLPGVSFFCEGLEMMARLDNKALFAEMCNECGVPVPESGTVASRAELEAVVQKLGGDMDLILKRIESTINREEEIKVVPRGEQAPASVQPSPTDPWQWQRFIRGTEYSAWFVCVEGRITFQGCYRSEGDLLFFDGIPVPQDVEAAIAGLVAKHRLTGQYAFDYFRE
Ga0186436_1027678	Ga0186436_10276781	F045108	PLDMPEELQDIADAGVDTRTPHWSSRPLEEAKGGLKMEQLDWPNAHGVACVLSGVLFLYELVRFVLGQPPSDLECYSAAVVYAVIYASRFQSIRVLPPHFRVTFYATTGWTVYYIAHLLAATTPELFAHSVYPAGIVFLASTIYFYKHWLERMYRHYVEDRFRPYYMPGLLGLMYFHALDTVDMFNQWLDPNYWQHVPLTLPDQAWTIQDVRLTGLFMSSMALFMITLHNKGVLTGGRNTLITVLFTIFVPAFFLTGTHATLQASFP
Ga0186436_1027962	Ga0186436_10279621	F049390	AAEAQAPFAQQRSPPAMFRVVPSGLLRPVLGGAAYAVWYLCVALRRLLRLLEPLLPRLRGTPKSPYAGKTVLVTTGRQAKTLHGIRALKDLGCRVVVTDYQEMSASAVSMACDVAETLAPLDPGRVGQWVEHLEAIVRREKVDLVVPMSTINEALFIGVAKDWLARRLPGVSFFCEGLEMMARLDNKALFAEMCNECGVPVPESGTVASRAELEAVVQKLGGDMDLILKRIESTINREEEIKVVPRGEQAPASVQPSPTDPWQWQRFIRGTEYSAWFVCVEGRITFQGCYRSEGDLLFFDGIPVPQDVEAAIAGLVAKHRLTGQYAFDYFRE
Ga0186436_1028096	Ga0186436_10280961	F049390	MFRVVPSGLLGPVLGGVAYAVWYLCVALRRLLRLLEPLLQRLRGAPKSPYAGKTVLVTTGRQAKTLHGIRALKDLGCRVVVTDYQEMSASAVSMACDVAETLAPLDPGRVGQWVEHLEAIVRREKVDLVVPMSTINEALFIGVAKDWLARRLPGVSFFCEGLEMMARLDNKALFAEMCNECGVPVPESGTVASRAELEAVVQKLGGDMDLILKRIESTINREEEIKVVPRGEQAPASVQPSPTDPWQWQRFIRGTEYSAWFVCVEGRITFQGCYRSEGDLLFFDGIPVPQDVEAAIAGLVAKHRLTGQYAFDYFRE
Ga0186436_1028135	Ga0186436_10281351	F016002	GRLGVPRPTGRGPRMRRGRAAPPRPAPPGGLPGALASTLSGDSDWMLGCCSCTGYDGLGGQGEIQVQLSTDPAANQNTRHPLTRGDSFDITFTPRSFGAAGSSNQSSRAMPITPRQRDLRDQLELPLLHTYPVAPHCSPEDGEEEFALDMHSGMYLTQLTSNRDYSDIHCQLMEDMNTLKLDQSNGRIIEFPLTNVSKVYRIVKNNDKWYAAGSPSVGPASPNTEQIVVVEFMRRKLAFVFKELVVSQRFLICMELLIRGAQQNYAKKALRALTPTFPPQHNQQGLCPTPRQVYDAQPRAPQQGAASVANATTPPRS
Ga0186436_1029015	Ga0186436_10290151	F058161	GSSRGSLWVAERIALCGLGRGLRKGTFQPAMAISATSPKLEFHGMYCYATGDMFCGTLDVTGKPNGRGILYYYYSGECDVAVFDNQLNQTGEGVRYTKDRDAAYRLVDGQLEGGQIDLEEALRIMELEDTPCVRTFDTIPNTTGYDPARHKQTQAYYSYRMLAGLPLNESNFGPSPYHPIWKKDAAATN
Ga0186436_1029323	Ga0186436_10293231	F004926	TAELLKAKCIPMPNWVFSAKFPLDALEKWTGRQIDLFAAAGLTLHQIRMKNPGQGKDWTAEAIWTHVKTMASVFKSRGMEPPIVYLHNHDFNGMGAHIGAQAFKLAQAEGFNTLVIDSAYRKNGTHNDNTVLLSALNISPAQGEALIEYNYNQQGIENILSRFDSRTSQMTPWDSDWAGGTEGSDIRIAKEFGLDVRKINHAKEVANEVFPLERAVTPFSEYKLRLGIAIMIEPAIEPKTADAVRKWVNGGGKLKVGGDVLVGLKRWETLVPKTPEVDKLLANMPDELAGAMGQSARLIGVDDLPGHFTPAQRHTALGYQQ
Ga0186436_1029348	Ga0186436_10293481	F093247	FGPSFAASLPVSGRARAPGRGAMEAALADSTAGLLSRFDNVTTKRSAKRIIACDAATAEYLRSDFLKPQHLPIERVDQEANFAAGSSLQETRFHRGFQRRHRSDIQPDAARMEMELSRDMAREERARASVEATKAYRERYTFNILTGEGSGRECEFRQVGKRILNPTGSMEAAFSEHPRNASNRIKSSKHRFFEHPAPQSEPRCANIFNEGLNETTRESSIIGYGNTGNRRTRSQSCGVSDNYAHLRELQPGPQYEAPHYGNRSQIILG
Ga0186436_1031825	Ga0186436_10318251	F056219	VQSFGQAAPAAPAMHIAAVLDLHWQRRGRPSIAGAGVGSVGRPRYCLCLPCGLLPELAGQKVHVWCLLAGLVALAVLCIGVFEAARLTTHVLKSPCTILGSEVLDVGTCTVCDDEEPANCEVHPIATARLAVTFKPMHMEENVTGWVWYCKGRAEIDPCQRRVKFLDQLSLDMRTSFDDPGVHPGGPIPCTAGQVYAYMQMHAAEGEPRECFYSSRDPKGEDVWLSMPSPGLVDHAWFRKRLEYPVLLALGGLVLLSVLLGCL
Ga0186436_1032764	Ga0186436_10327641	F034578	PQALLDKLAHEALKEDQRLRQGQAGGQGPVFSTVLCHLLYALAAVVHLHPKAAAHSAAVRGAAFSQLMKVQRIVSQSMGPQALCDPADGGRAKLFLCIRAIACIQCALRIVTGSWFAADFGVRFTVSEEGGRDFMQYCTKHINQVYNSRTAITRVLGTPWERLMLSQGPTEAIAELLLAVCSSDANLLEVSRLGGEQALQGLSRYAETPHVRQQATMLLTKLAVAQRL
Ga0186436_1034231	Ga0186436_10342311	F088217	LVAGRLAFNTLADQPLRGAPIREGELWYLYAEEKVDLVRVALHVNGFSFLHGEREVSVSVSPFALVRNCKFQSSCSHLAKIKIFKVSLFTQGSCYYYGVRGEDERWAEEERSRWVADISRVMRLVTVSLFPSFGICCDPLDAVARTRRRIMAGYLVHRDDAASASVLYCELHPQFEDHAKLAAYENELCQVPVIDIYFTECSVCSEKVGINCTCFSIEEHQFSARTIAERKLWLRAISNIKVKLQNHAPAPTREELRHYRLAIKEHLDTIRSSLDCYAPMDA
Ga0186436_1034351	Ga0186436_10343511	F012119	QGSGSGRARPRHQARGRPTPAPGCERLEPQQPHAGMSFAENLTKIVADKKAEQSDRERVAGKWCAYEGKLLDRAVELFKQRCIREAEQQKCEATISFEVLSREIDDFPKRVLTDSTYFVDTWGDGLSAESWFYATRGLTASWSPGAPVLFAEVLQGMLPKFVDKVKALGFLSCSHEAGTWKVSVSWQMPPLDEDPPAKKRRGAEGP
Ga0186436_1037390	Ga0186436_10373901	F000085	WLKAQSGRTQPPPGISAPTAMSLQRLVLTSVGLFATRSAAQDWPACQEQNSVIRSAGQALFTNLQSYGATIGCFLDDCMSSDKFVASEIESCAKVCYSLPECEWWVWGTEEGEQKCWFRTGDSGREAGEGWTSGHKSCHPPGTQVLPMGNSECWSEGFGYETCCDAKYGPNGNAQCWDGVYNYDRCCFPKDEL
Ga0186436_1037781	Ga0186436_10377811	F000076	HTRAPTRAAAALRAMAEEEGQEVIFTENTAPDREIWDEKGGLIKKGAAEIAERDQDHVPEVKVLTTLGMFAVPVTAETTIGEIRQKVQEWKPEYSLEQIELVCKDKDAWGPLFNKTSRPRDDDETVESLWSDWDIPRRMMQVALWIKEKNEETGEWESTFWKMLEESKCDDWSFQGHTI
Ga0186436_1038037	Ga0186436_10380371	F000115	GGRAQGQLRAQPAAPPPAAGSFVKVAARRGALAFKHRLRVCNAYPYSAALDVFHGDKEKLTEDSPMNYKDCRNFVTPLKGGDKLEFKIGDATAGTFAVSELPNNDAVLMLVITRHDTLSTAVSFESHVFANLLNAQVAIIDAYRGAAVAMPMIRDAGGDQGPTRSEELRYNSVVAVNPGVYEVVLVGKDSEVKAKSSLVALNRESYVVLRTGVEAVQGDSYPEELVVFPRSDEKALQSAAPRAAGGWRPALLALAA
Ga0186436_1040672	Ga0186436_10406721	F018723	MAEKEDTKAKGEQQEPKKVDKPPFIQQSSLKDVYYLFCDPKTKLLPLNDVPYILRASGLTIYGEEEKKIKAEVEKIDGLGKPVSFTTLENWLSENQKNYVKSYEDAYNALATLCHEGITGDKGVVKIPHLRHLVGEVGDKIKPDTFDRILKGSDGSDGIKGDACSLDEFVSFLQK
Ga0186436_1041399	Ga0186436_10413991	F020362	AAQMYPDCVEGNVVMRHAGAHAIFVDLGAYGTSGCWQNDCKNTDKFNAVDQGVCARACAAVDECTHWTFGEQEGATKCFLRKSDGGREEAEGWAAAAKACAPAPVPDAYAALLAVDVGELQACDGGKSDACPDMAKAMATWKYAIGSLQRATEGQLDANTMQYVNQIASDTDAFAAQMSEENFPVVVGNNRQVFNALRGWLEGQPKADLDPNDPSLPNPLKGRLCGPTSCYE
Ga0186436_1043471	Ga0186436_10434711	F071920	AALGLAASAAAAGPPSFNSTKCPAYWELQAPHISRDFRLEDLPGYYYELAFHDVTQYPLCPGRSRCITSEKAIQKHADGARFVNDTWDLSCFGVAYPQQLLFNETDTPGYLLGYVPVTKIPFLPKGVVSSLVFPDTVVDFRAGPDGWALEFQCVEWLGAVRFVGINFYARRKTEAAFQEMLAAARARGLGYYMDSGLGLRRVDHGDCPKEPPAAAAPAIVL
Ga0186436_1043951	Ga0186436_10439511	F036711	ASGMPVWQNINLKQKAVFEIIQRPHARELPYYLSDAELDFFVRGIAWGPHRNTYLPQLVERHKRPIYIARGYAPPTYSRLVKIRFYGPDPVLKDHEGWDAGEEGEVMEYVMGWRWLYAYWPGPLVDEVVRAWDTPMWPDVARPDWSWEGLKFCVPPYYVPEDGLPWRKGRDAEYQPIRVTKGKGKGRAVGGRTPAAGEVKDRGDQDSARKVEGRGQAS
Ga0186436_1045187	Ga0186436_10451871	F030772	TLTFGLPFSYIAIQNIYICHDVMHGATFPPYTWQKYLTHPFSDFFSLSWEEFVLEHNRHHASTVDLLQQGEFGWDPEEFQYLMLEWTWRHKKYPFPIHPFGLLFTGALLPVIHFFGLNDTGALFAIEWYCHFPEEGAGGKCNKEFWKKWFPRRLAHHTFVLGLWACIWLLGTWPLGRPLSEGWRFAFTVSCFSRLGFSAAWMFITNFTHSH
Ga0186436_1046192	Ga0186436_10461921	F001154	AQAISARRLLGGAPGCPRPSELPSPGRMVKVTIGKPEDPWCEIDLTDEDVEDWKKGVDIAEEKLKEVLQLPPITIENCHEREDGDLQWDEITFEEEVNGKYWHALIMALHRVREDFIKKQRKMKHLDWYLTMKRTSDKRNPKYYV
Ga0186436_1047718	Ga0186436_10477181	F005748	RPSAQVPRPPPASRAMSTWRLRPYAAAAGSAAVLPMSSLSAGFSKVGLSLLVLPWKALPMALVVAPTVWLLPAAYRLIFQNSMRHTTASVFTVILYLVLSFMPVPCFENLFSELTFYGIALVSTFFMYTFFPEVMLHDFMFMHYLALFTIPLIPLAFAYMPMFAARSYLFL
Ga0186436_1047923	Ga0186436_10479231	F049393	GAVMCIASLLCGSLNLALAGVLGETKLNVYDTVAYMALPATIFLAPIAFYLEKPVPGEWSKVFGQPQMTDFQILAGVWSLNKTTMAWLVLSGVFSFIYNIIQFSIVHTLSPSATAFGGNFNKAALVFLTLLLPFLRVHELPGAPYIWVIWLSVLLNISAFSYYSYLQIKAKEEQARQQAKAKLQEAEAELTEDGEG
Ga0186436_1051536	Ga0186436_10515361	F050131	ARSQMSRAGASIAGSTGSSIPTIQETGFLSGKTRVSDAIRARCSMWKPHKSELHTSLPKTRFGMTVYADTRHVTEANVPLSHSYLSEADRFRTTNAAHSIYAAPDPRHPQTEDAMKRHARSEFRVERIRQRQHDFSERCLAANEAARSFDEMKIARKAMNQLNYERKCHMSCC
Ga0186436_1052501	Ga0186436_10525011	F049393	GAVMCIASLLCGSLNLALAGVLGETKLNVYDTVAYMALPATLFLAPIALYLQKPVPGEWSKVFGQPQMTDFQILAGVWSLNKTTMAWLVLSGVFSFAYNIIQFSIVHTLSPSATAFGGNFNKAALVFLTLLLPFLRVHELPGAPYIQVIWLSVIINISAFSYYSYLQIKAKEE
Ga0186436_1053729	Ga0186436_10537291	F067800	GGGPPAAAAAMDKLMPVVGGAVGLYVAYKVLPVMYRWELIPGLGSPEYQAKAAKIRYDHYTEGIVYSPYDTGDPIREMPPECANKMLLKQKGGGWKFQSEM

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300017489: Metatranscriptome of marine eukaryotic communities from Gulf of Mexico in f/2 medium with artificial seawater w/o silicate, 18 C, 28 psu salinity and 318 ?mol photons light - Lingulodinium polyedrum CCMP 1738 (MMETSP1032)

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences