Sample 3300019720

Overview

Basic Information
IMG/M Taxon OID	3300019720 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0129088 \| Gp0217657 \| Ga0193991
Sample Name	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? BLC_2-3_MG
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	110028740
Sequencing Scaffolds	33
Novel Protein Genes	37
Associated Families	35

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria	1
Not Available	14
All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Sedimenticola → Sedimenticola thiotaurini	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1
All Organisms → cellular organisms → Bacteria → Proteobacteria	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Olavius algarvensis Delta 1 endosymbiont	2
All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → unclassified Halobacteria → Halobacteria archaeon	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium → Sphingobium fuliginis	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter → Candidatus Accumulibacter contiguus	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1
All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter → Candidatus Accumulibacter phosphatis	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Halieaceae → Pseudohalioglobus → Pseudohalioglobus sediminis	1
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Caudoviricetes sp.	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Microbial Communities From Sediments And Microbial Mats In Various Locations
Type	Environmental
Taxonomy	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment → Microbial Communities From Sediments And Microbial Mats In Various Locations

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	freshwater river biome → river → sediment
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline)

Location Information
Location	USA: Delaware
Coordinates	Lat. (^o)	38.7906	Long. (^o)	-75.1638	Alt. (m)	N/A	Depth (m)	0
Location on Map

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Family	Category	Number of Sequences	3D Structure?
F004052	Metagenome / Metatranscriptome	455	Y
F005564	Metagenome / Metatranscriptome	396	Y
F006940	Metagenome / Metatranscriptome	361	Y
F006971	Metagenome / Metatranscriptome	361	Y
F012457	Metagenome	280	Y
F021441	Metagenome / Metatranscriptome	219	Y
F024678	Metagenome / Metatranscriptome	205	Y
F029111	Metagenome / Metatranscriptome	189	Y
F037736	Metagenome / Metatranscriptome	167	Y
F039151	Metagenome / Metatranscriptome	164	N
F039398	Metagenome / Metatranscriptome	164	N
F040603	Metagenome / Metatranscriptome	161	N
F040633	Metagenome / Metatranscriptome	161	Y
F042909	Metagenome	157	Y
F045104	Metagenome / Metatranscriptome	153	Y
F058634	Metagenome / Metatranscriptome	134	Y
F059360	Metagenome / Metatranscriptome	134	Y
F062772	Metagenome	130	Y
F063710	Metagenome	129	Y
F071259	Metagenome	122	Y
F073262	Metagenome	120	Y
F073570	Metagenome	120	Y
F074892	Metagenome / Metatranscriptome	119	Y
F076890	Metagenome / Metatranscriptome	117	N
F080062	Metagenome / Metatranscriptome	115	Y
F081352	Metagenome / Metatranscriptome	114	Y
F084398	Metagenome / Metatranscriptome	112	N
F085725	Metagenome	111	Y
F087210	Metagenome / Metatranscriptome	110	Y
F088283	Metagenome / Metatranscriptome	109	Y
F088919	Metagenome	109	Y
F089520	Metagenome	109	Y
F090406	Metagenome	108	N
F092862	Metagenome	107	Y
F104552	Metagenome / Metatranscriptome	100	Y

Family

Category

Number of Sequences

3D Structure?

F004052

Metagenome / Metatranscriptome

455

F005564

Metagenome / Metatranscriptome

396

F006940

Metagenome / Metatranscriptome

361

F006971

Metagenome / Metatranscriptome

361

F012457

Metagenome

280

F021441

Metagenome / Metatranscriptome

219

F024678

Metagenome / Metatranscriptome

205

F029111

Metagenome / Metatranscriptome

189

F037736

Metagenome / Metatranscriptome

167

F039151

Metagenome / Metatranscriptome

164

F039398

Metagenome / Metatranscriptome

164

F040603

Metagenome / Metatranscriptome

161

F040633

Metagenome / Metatranscriptome

161

F042909

Metagenome

157

F045104

Metagenome / Metatranscriptome

153

F058634

Metagenome / Metatranscriptome

134

F059360

Metagenome / Metatranscriptome

134

F062772

Metagenome

130

F063710

Metagenome

129

F071259

Metagenome

122

F073262

Metagenome

120

F073570

Metagenome

120

F074892

Metagenome / Metatranscriptome

119

F076890

Metagenome / Metatranscriptome

117

F080062

Metagenome / Metatranscriptome

115

F081352

Metagenome / Metatranscriptome

114

F084398

Metagenome / Metatranscriptome

112

F085725

Metagenome

111

F087210

Metagenome / Metatranscriptome

110

F088283

Metagenome / Metatranscriptome

109

F088919

Metagenome

109

F089520

Metagenome

109

F090406

Metagenome

108

F092862

Metagenome

107

F104552

Metagenome / Metatranscriptome

100

Scaffold	Taxonomy	Length	IMG/M Link
Ga0193991_1000150	All Organisms → cellular organisms → Bacteria	3870	Open in IMG/M
Ga0193991_1002037	Not Available	1692	Open in IMG/M
Ga0193991_1002434	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1597	Open in IMG/M
Ga0193991_1003735	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Sedimenticola → Sedimenticola thiotaurini	1380	Open in IMG/M
Ga0193991_1004061	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1338	Open in IMG/M
Ga0193991_1004301	Not Available	1310	Open in IMG/M
Ga0193991_1006336	All Organisms → cellular organisms → Bacteria → Proteobacteria	1138	Open in IMG/M
Ga0193991_1006447	Not Available	1132	Open in IMG/M
Ga0193991_1006571	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Olavius algarvensis Delta 1 endosymbiont	1123	Open in IMG/M
Ga0193991_1009535	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → unclassified Halobacteria → Halobacteria archaeon	983	Open in IMG/M
Ga0193991_1011812	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium → Sphingobium fuliginis	909	Open in IMG/M
Ga0193991_1012316	Not Available	896	Open in IMG/M
Ga0193991_1013869	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter → Candidatus Accumulibacter contiguus	859	Open in IMG/M
Ga0193991_1014303	Not Available	850	Open in IMG/M
Ga0193991_1014858	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	837	Open in IMG/M
Ga0193991_1021913	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	727	Open in IMG/M
Ga0193991_1025889	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	685	Open in IMG/M
Ga0193991_1026207	Not Available	682	Open in IMG/M
Ga0193991_1026732	Not Available	677	Open in IMG/M
Ga0193991_1028668	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	660	Open in IMG/M
Ga0193991_1028839	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Olavius algarvensis Delta 1 endosymbiont	659	Open in IMG/M
Ga0193991_1029800	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	652	Open in IMG/M
Ga0193991_1030079	Not Available	649	Open in IMG/M
Ga0193991_1030430	Not Available	647	Open in IMG/M
Ga0193991_1031203	Not Available	641	Open in IMG/M
Ga0193991_1032627	Not Available	631	Open in IMG/M
Ga0193991_1032671	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter → Candidatus Accumulibacter phosphatis	631	Open in IMG/M
Ga0193991_1032884	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Halieaceae → Pseudohalioglobus → Pseudohalioglobus sediminis	629	Open in IMG/M
Ga0193991_1033595	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Caudoviricetes sp.	624	Open in IMG/M
Ga0193991_1034080	Not Available	621	Open in IMG/M
Ga0193991_1042285	Not Available	576	Open in IMG/M
Ga0193991_1046244	Not Available	559	Open in IMG/M
Ga0193991_1052652	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	535	Open in IMG/M

Scaffold

Taxonomy

Length

IMG/M Link

Ga0193991_1000150

All Organisms → cellular organisms → Bacteria

3870

Open in IMG/M

Ga0193991_1002037

Not Available

1692

Open in IMG/M

Ga0193991_1002434

All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium

1597

Open in IMG/M

Ga0193991_1003735

All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Sedimenticola → Sedimenticola thiotaurini

1380

Open in IMG/M

Ga0193991_1004061

All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium

1338

Open in IMG/M

Ga0193991_1004301

Not Available

1310

Open in IMG/M

Ga0193991_1006336

All Organisms → cellular organisms → Bacteria → Proteobacteria

1138

Open in IMG/M

Ga0193991_1006447

Not Available

1132

Open in IMG/M

Ga0193991_1006571

All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Olavius algarvensis Delta 1 endosymbiont

1123

Open in IMG/M

Ga0193991_1009535

All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → unclassified Halobacteria → Halobacteria archaeon

983

Open in IMG/M

Ga0193991_1011812

All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium → Sphingobium fuliginis

909

Open in IMG/M

Ga0193991_1012316

Not Available

896

Open in IMG/M

Ga0193991_1013869

All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter → Candidatus Accumulibacter contiguus

859

Open in IMG/M

Ga0193991_1014303

Not Available

850

Open in IMG/M

Ga0193991_1014858

All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria

837

Open in IMG/M

Ga0193991_1021913

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria

727

Open in IMG/M

Ga0193991_1025889

All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria

685

Open in IMG/M

Ga0193991_1026207

Not Available

682

Open in IMG/M

Ga0193991_1026732

Not Available

677

Open in IMG/M

Ga0193991_1028668

All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium

660

659

All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium

652

Open in IMG/M

Ga0193991_1030079

Not Available

649

Open in IMG/M

Ga0193991_1030430

Not Available

647

Open in IMG/M

Ga0193991_1031203

Not Available

641

Open in IMG/M

Ga0193991_1032627

Not Available

631

Open in IMG/M

Ga0193991_1032671

All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter → Candidatus Accumulibacter phosphatis

631

Open in IMG/M

Ga0193991_1032884

All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Halieaceae → Pseudohalioglobus → Pseudohalioglobus sediminis

629

Open in IMG/M

Ga0193991_1033595

All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Caudoviricetes sp.

624

Open in IMG/M

Ga0193991_1034080

Not Available

621

Open in IMG/M

Ga0193991_1042285

Not Available

576

Open in IMG/M

Ga0193991_1046244

Not Available

559

Open in IMG/M

Ga0193991_1052652

All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria

535

Open in IMG/M

Scaffold ID	Protein ID	Family	Sequence
Ga0193991_1000150	Ga0193991_10001503	F029111	MLISGGGGNRTAGSSPDPDESPTVSRTGIDENTSKEPEENALVDILMTMSQIPDVNRELAEAGAMFAVLEALRRSGRR
Ga0193991_1000654	Ga0193991_10006542	F076890	MIGTRSVAAMLVAMGALGTSACSTLEVDDYCRYSETRSIRTADPESLALVLGVQAGRARQTPFVVIRSLSESAPGTSITLYTTPAAHPMPMGLDESRCARMDWKTYTLAVDPDEWNAFWQDDRNSPFEIGIAFVEDFHPLPLSAFGAVILDTGSADYLVSCGCFWR
Ga0193991_1002037	Ga0193991_10020371	F063710	MNKPRQRSLRVRVEHEPNRFSDDCLERIYEQLHPTKSREVTPDKNNKQGEVEPQKGKEGQ
Ga0193991_1002434	Ga0193991_10024343	F074892	MTAMTSKYASIVLLGLLLSSCAERGENVYKSWVGPDRPNMAIVTLRLGDDVRDITVRERVLPRSEYGTLLLVPGQYTLYEDDGANIGITIRPVMMNTEKARASGELILGHTYILHAGKSKDGGERALWIEDARSGEVFIDTR
Ga0193991_1003735	Ga0193991_10037353	F062772	MSLDGIWSCELGGAYGWEPIGTLFLQEGHVEGCGRNHYTLGTYEAKGDGAVFHIELNQFGKKRTLFGQKSEQVSVVVKAKWDHEKLIGEATLPGHRQYGIFVRFKRRADLP
Ga0193991_1004061	Ga0193991_10040611	F085725	MNLLPLLFLFLISAVGIGIYLVFLGLHQRKRSPGLGLTHAGLALSGFIVLFIEIYSGPIDKLNNIAALLLFFAILGGGMVFALNEEGRPPSMAAVIAHATMGLAGISLLIINLFLS
Ga0193991_1004301	Ga0193991_10043011	F088283	ILLTSLGVFSGCATGSDVTGSYSPSCVAFEGNTIELSENRFTWDKFTDEVTVDDTGNEVDPFPGFPVRGVYAIEDDVVSLTTDVGELAAELYIVRRPGQVYLLTESEFEAWQKDSTVPDCALLLGSGE
Ga0193991_1006197	Ga0193991_10061971	F088919	MHVEEICLSANVVDLDPDQPPEDREQSAALEQTNGMRFCRSAFTLFNNHRLAVKTQGFMQHARDYTIDIGMLDPHPKRLFKIGWSYLLSCIALCAAAWFLGSISLAVCAGLTLILAIYRSHDRLVFYSQYGRVPLVVLFNRSPDRVTLASFTDVLVQHIKDAKTRYPAANEALSEELKAHRRLMQEGGISSKRYNIVKQRILSLHSNKAIKGSVTND
Ga0193991_1006336	Ga0193991_10063362	F039151	MLHTKHITLTNATEQTLFTIPTGYTIHIVYIFIANHGGSTNQVSLWWETGGVDQMYFFDGTSIGSGNKEILGGQNDKGIFVLHNGDTVKTQASSATGQMEVAVTFELLERPTAFSNFNGS
Ga0193991_1006447	Ga0193991_10064471	F021441	SMRIRKNNLLPWFTDDHRTLPDWYLKSCRSFFDSIKLQASSIKPQASIQKNLHKPGTRVKNRFNRKI
Ga0193991_1006571	Ga0193991_10065712	F037736	VPLQKDGGQACRVQLDGLQILWLLANPLWTHGIGESGSKTITGWLLMDAAAANHIWWLNTNPFTGLLLHINSYRIRHLPFGFLTASEFQSRSTCLIKK
Ga0193991_1009535	Ga0193991_10095352	F005564	LETEIYMHKLIIGLMVIFFLGDPSLQSLAWLGEMKTYLVAAAIALVSLPFVVSQLDG
Ga0193991_1011812	Ga0193991_10118122	F040633	MSVSGVRRVKAAFSSGCKSHPAILLQPEAIGAVMEVTKWLVALGKRGRGG
Ga0193991_1012316	Ga0193991_10123161	F006940	MKRLSLDDISNAPSLPEKEIEIPEWDATVLVTGLTKADAVEINELSEKDGVRDEVLFEKHLLLKGLKEPEFDDLDQVEEFYSKATPSIVDKVLIGIY
Ga0193991_1013869	Ga0193991_10138691	F045104	PASVMAKYAPGPRPAPLRNAPPWCGLWSGPRRSAAVLFDPVIHRQLVLSLANTEQARATLLDWLAEQSAHLVIPDTLLAQPGLHHPNQIPVAVWIAPSALLEAIRFTTGLTTRAPKHTAALLARWPTAPALRPFLRRLTASRHPEQLSLL
Ga0193991_1014303	Ga0193991_10143031	F012457	MMIKDLEMSKDLDRDALSAVRGGRNSIEQGGVYAPVANAGGGFSFGSPTTIVSAPVNAPSAVLNDNDLHLKLANKSTSVLGSLGTVVLQ
Ga0193991_1014858	Ga0193991_10148581	F058634	MRYASAFVTSAMFAAALAGCNSDGSQGAEGVGNIDMKVTLATPPSGPNEQIDAVDVSFYCDGIDPVLGVPRPPQSSPEQFTINTATSQGPEPKNTIGLFEKQGLPAGDCHFSFSAVSNTGNTECTGEITLAVATNATTAGEVVLACIHTPRYGGVRPDGTFNQCAEYRQLLVTPTTQSIGNLVDVRTEVYDPDGDDVTVRVQAVGACGNVQSANGNTAASC
Ga0193991_1017610	Ga0193991_10176102	F087210	FASAETALAHTPDTGFLSNFGHQLTSLHHSPAAMLLGVVVLVLMLVAVRKLTTR
Ga0193991_1021913	Ga0193991_10219133	F084398	MARLELTLNFPKNFEIKTFNVKSEKTLSPLAKSILLSVQFKHFYYVRDDISYLLKSNPIERDFLLQALYSTVISLQNNLSINFFDMW
Ga0193991_1025889	Ga0193991_10258891	F058634	GGLLAMVLTGCGSNTSQPQGIGSVDMTVTLAQPPSGPNEQIDTVDVSLYCDGVDPVLGVPRPPQSSPETFSINVATSQGPEPYNTIGLLEKQGLPAGNCHFSFAAVSNTGNTQCTGELTVAIATNETTQSEVVLACIHTPRYGGVRTDGTFNQCAEYRQILVTPTTQAIGNLVDVRTEVYDPDGDDVTVGVQAVGACSNVEFSNGDTAASCETVSGCEAVVNTVECTD
Ga0193991_1026207	Ga0193991_10262071	F092862	MNEDKCKFCGSTELVYHQYTICDSSCQECGEWQSGDYI
Ga0193991_1026732	Ga0193991_10267321	F039398	MEYAADDINIGYMTCLMFINSEKTLVDKLNNITELQPIDHQGGVSFDLVLKSLPTYVEITMNHNGNFNIYTKTLKGETEFKDEVVETLINFLHIFYVNMVDDENKLLLNAIDTTTYRKIAKRMHYREKFGNDLSGD
Ga0193991_1026732	Ga0193991_10267322	F006971	MIYQGIEYKKHQKVKFVIPTDLRIVDPQTKKILWRYGIIQFFAKNTKSAWIVENGTKESIKISLFCVLPVN
Ga0193991_1028668	Ga0193991_10286682	F089520	MGHEIEDGEVAIVIKPELDENGEWDGALKTGLVFGGNQNPMAMRAAMDLAMTMAATTNVLDDYPELYDYFDDARVELVKQMFPKAYAETELEIEKEMEYTKEGNVIKLTKWTKTLGEA
Ga0193991_1028839	Ga0193991_10288392	F037736	VPYRVQLDGLQILWFLANPLWTHGMGESGSKTFTGWLLMGAADANHIWWLNINPPQADLLLHLNSYRI
Ga0193991_1029800	Ga0193991_10298002	F071259	MKRKQSRIIIGTAIGAAVIAVAIDHTRQRLPQAEKQLASQDAVIIIDEGEELPAENSSDCGKPAGRGRQASPCSL
Ga0193991_1030079	Ga0193991_10300792	F042909	MVDLINFIGNLNLGTFIVIWTSTIFSVIFIILLLFSVSQMNKETIKICKKVKILIEGLSEKLNLGNDDIIF
Ga0193991_1030430	Ga0193991_10304301	F073570	MNEPINQIVGNLNTTLHLQMSQNKVSVGSLTGAQVDNKKTSHKYTIENDLIVYEKYDRHGKLISRVPWLPKTIDEKV
Ga0193991_1031203	Ga0193991_10312031	F073262	ANNHLEGLRAPVGIATQLLALQSATNTMGTNFNVSLDRPKTVATLQDKCPMLIVSLLVVCEVTAMADSPVHWSTVHPMLKATEWAACHANALDSTGSETNKLVPVTSPPLVQDMGNGHFAASSANNPTEGISIFCIQPSCMPRHQEHLNCNRTFELLV
Ga0193991_1032627	Ga0193991_10326271	F004052	MRILTMIVLFSLTALLCACDQRHAASDVDPELGLECFESHRAALPPGSQYEGIEKLADNTLTIRIMNGVDVVTLDCGL
Ga0193991_1032671	Ga0193991_10326711	F104552	LFLSRIACCQVWALLLLLGLLVPAQAAEALETDALPQAQAALERLEQQLASARTATAQELKALKKEIAKVRSSAQDCVQRAEPKIEILDSELAILQPAKPKDTQKKTAEEAQPAEQAEAPVSPAIARQLQELLSRKASLEGRIANCKLVLLGSSDLDSKVDDDLRSLQTRQLLTRGPDLVSVLQANLDERKRWLDFTGQLAVTSTGWDAI
Ga0193991_1032884	Ga0193991_10328841	F090406	IVVLAGLAACSTTLTSVDKEGGNVYALPPTVVDEMLKDAMSTEISTGTLRRGSKPYPSYLGEVTWGSLDKDTITASARPAKGRKLDGTIIDGYVFEVTRKGTAPATGEPTVKRIFAKLQNDAELTGTGVAFVEFTD
Ga0193991_1033595	Ga0193991_10335951	F040603	MYYTKHKTLADTSETALFTVPAGYVLWVNYIFIANHGGSTNNVSCWREDGAGVDQLYFLDNNSLNSGAKEILGGQADAPIFVLHNGDVVKAQTGSAGDVEIAFTFKLMNEPAAFPNFNGS
Ga0193991_1034080	Ga0193991_10340801	F059360	MTLFKEVLVPANLVPAAAVIREGQALSEITGRKESVDCNISYMLKFKA
Ga0193991_1042285	Ga0193991_10422851	F081352	LYSEHRNYILLDHFSRIYYDPXLMFLADVSLMIRLIRKISTITLACLLVLNLTAGAAVVVEHCPPLLCSSSPMDIDHCDGMLNFAFPMQGCCGDCNDIFCDLIKNPLQDANAVNASPFQGSCYPFFLGNVDPIAESGTWVAWSAPRYLFFAALAWSQIPLYIENLALIIXNHHLSA
Ga0193991_1046244	Ga0193991_10462441	F024678	MRVALKLFLFFIGMALSMLGIMVALHSQQHTILGVLILFSGMTTIWGS
Ga0193991_1052652	Ga0193991_10526521	F080062	MQLTLPKILWFVAALGLAWGINQWRQQAAAHVLAAAQEGDRDAAESWVDRALRESQCELHEASDYLASEATRQYVRRPGYVETFVDKLYAGGAARLELCESDALGFR

Scaffold ID

Protein ID

Family

Sequence

Ga0193991_1000150

Ga0193991_10001503

F029111

MLISGGGGNRTAGSSPDPDESPTVSRTGIDENTSKEPEENALVDILMTMSQIPDVNRELAEAGAMFAVLEALRRSGRR

Ga0193991_1000654

Ga0193991_10006542

F076890

MIGTRSVAAMLVAMGALGTSACSTLEVDDYCRYSETRSIRTADPESLALVLGVQAGRARQTPFVVIRSLSESAPGTSITLYTTPAAHPMPMGLDESRCARMDWKTYTLAVDPDEWNAFWQDDRNSPFEIGIAFVEDFHPLPLSAFGAVILDTGSADYLVSCGCFWR

Ga0193991_1002037

Ga0193991_10020371

F063710

MNKPRQRSLRVRVEHEPNRFSDDCLERIYEQLHPTKSREVTPDKNNKQGEVEPQKGKEGQ

Ga0193991_1002434

Ga0193991_10024343

F074892

MTAMTSKYASIVLLGLLLSSCAERGENVYKSWVGPDRPNMAIVTLRLGDDVRDITVRERVLPRSEYGTLLLVPGQYTLYEDDGANIGITIRPVMMNTEKARASGELILGHTYILHAGKSKDGGERALWIEDARSGEVFIDTR

Ga0193991_1003735

Ga0193991_10037353

F062772

MSLDGIWSCELGGAYGWEPIGTLFLQEGHVEGCGRNHYTLGTYEAKGDGAVFHIELNQFGKKRTLFGQKSEQVSVVVKAKWDHEKLIGEATLPGHRQYGIFVRFKRRADLP

Ga0193991_1004061

Ga0193991_10040611

F085725

MNLLPLLFLFLISAVGIGIYLVFLGLHQRKRSPGLGLTHAGLALSGFIVLFIEIYSGPIDKLNNIAALLLFFAILGGGMVFALNEEGRPPSMAAVIAHATMGLAGISLLIINLFLS

Ga0193991_1004301

Ga0193991_10043011

F088283

ILLTSLGVFSGCATGSDVTGSYSPSCVAFEGNTIELSENRFTWDKFTDEVTVDDTGNEVDPFPGFPVRGVYAIEDDVVSLTTDVGELAAELYIVRRPGQVYLLTESEFEAWQKDSTVPDCALLLGSGE

Ga0193991_1006197

Ga0193991_10061971

F088919

MHVEEICLSANVVDLDPDQPPEDREQSAALEQTNGMRFCRSAFTLFNNHRLAVKTQGFMQHARDYTIDIGMLDPHPKRLFKIGWSYLLSCIALCAAAWFLGSISLAVCAGLTLILAIYRSHDRLVFYSQYGRVPLVVLFNRSPDRVTLASFTDVLVQHIKDAKTRYPAANEALSEELKAHRRLMQEGGISSKRYNIVKQRILSLHSNKAIKGSVTND

Ga0193991_1006336

Ga0193991_10063362

F039151

MLHTKHITLTNATEQTLFTIPTGYTIHIVYIFIANHGGSTNQVSLWWETGGVDQMYFFDGTSIGSGNKEILGGQNDKGIFVLHNGDTVKTQASSATGQMEVAVTFELLERPTAFSNFNGS

Ga0193991_1006447

Ga0193991_10064471

F021441

SMRIRKNNLLPWFTDDHRTLPDWYLKSCRSFFDSIKLQASSIKPQASIQKNLHKPGTRVKNRFNRKI

Ga0193991_1006571

Ga0193991_10065712

F037736

VPLQKDGGQACRVQLDGLQILWLLANPLWTHGIGESGSKTITGWLLMDAAAANHIWWLNTNPFTGLLLHINSYRIRHLPFGFLTASEFQSRSTCLIKK

Ga0193991_1009535

Ga0193991_10095352

F005564

LETEIYMHKLIIGLMVIFFLGDPSLQSLAWLGEMKTYLVAAAIALVSLPFVVSQLDG

Ga0193991_1011812

Ga0193991_10118122

F040633

MSVSGVRRVKAAFSSGCKSHPAILLQPEAIGAVMEVTKWLVALGKRGRGG

Ga0193991_1012316

Ga0193991_10123161

F006940

MKRLSLDDISNAPSLPEKEIEIPEWDATVLVTGLTKADAVEINELSEKDGVRDEVLFEKHLLLKGLKEPEFDDLDQVEEFYSKATPSIVDKVLIGIY

Ga0193991_1013869

Ga0193991_10138691

F045104

PASVMAKYAPGPRPAPLRNAPPWCGLWSGPRRSAAVLFDPVIHRQLVLSLANTEQARATLLDWLAEQSAHLVIPDTLLAQPGLHHPNQIPVAVWIAPSALLEAIRFTTGLTTRAPKHTAALLARWPTAPALRPFLRRLTASRHPEQLSLL

Ga0193991_1014303

Ga0193991_10143031

F012457

MMIKDLEMSKDLDRDALSAVRGGRNSIEQGGVYAPVANAGGGFSFGSPTTIVSAPVNAPSAVLNDNDLHLKLANKSTSVLGSLGTVVLQ

Ga0193991_1014858

Ga0193991_10148581

F058634

MRYASAFVTSAMFAAALAGCNSDGSQGAEGVGNIDMKVTLATPPSGPNEQIDAVDVSFYCDGIDPVLGVPRPPQSSPEQFTINTATSQGPEPKNTIGLFEKQGLPAGDCHFSFSAVSNTGNTECTGEITLAVATNATTAGEVVLACIHTPRYGGVRPDGTFNQCAEYRQLLVTPTTQSIGNLVDVRTEVYDPDGDDVTVRVQAVGACGNVQSANGNTAASC

Ga0193991_1017610

Ga0193991_10176102

F087210

FASAETALAHTPDTGFLSNFGHQLTSLHHSPAAMLLGVVVLVLMLVAVRKLTTR

Ga0193991_1021913

Ga0193991_10219133

F084398

MARLELTLNFPKNFEIKTFNVKSEKTLSPLAKSILLSVQFKHFYYVRDDISYLLKSNPIERDFLLQALYSTVISLQNNLSINFFDMW

Ga0193991_1025889

Ga0193991_10258891

F058634

GGLLAMVLTGCGSNTSQPQGIGSVDMTVTLAQPPSGPNEQIDTVDVSLYCDGVDPVLGVPRPPQSSPETFSINVATSQGPEPYNTIGLLEKQGLPAGNCHFSFAAVSNTGNTQCTGELTVAIATNETTQSEVVLACIHTPRYGGVRTDGTFNQCAEYRQILVTPTTQAIGNLVDVRTEVYDPDGDDVTVGVQAVGACSNVEFSNGDTAASCETVSGCEAVVNTVECTD

Ga0193991_1026207

Ga0193991_10262071

F092862

MNEDKCKFCGSTELVYHQYTICDSSCQECGEWQSGDYI

Ga0193991_1026732

Ga0193991_10267321

F039398

MEYAADDINIGYMTCLMFINSEKTLVDKLNNITELQPIDHQGGVSFDLVLKSLPTYVEITMNHNGNFNIYTKTLKGETEFKDEVVETLINFLHIFYVNMVDDENKLLLNAIDTTTYRKIAKRMHYREKFGNDLSGD

Ga0193991_1026732

Ga0193991_10267322

F006971

MIYQGIEYKKHQKVKFVIPTDLRIVDPQTKKILWRYGIIQFFAKNTKSAWIVENGTKESIKISLFCVLPVN

Ga0193991_1028668

Ga0193991_10286682

F089520

MGHEIEDGEVAIVIKPELDENGEWDGALKTGLVFGGNQNPMAMRAAMDLAMTMAATTNVLDDYPELYDYFDDARVELVKQMFPKAYAETELEIEKEMEYTKEGNVIKLTKWTKTLGEA

Ga0193991_1028839

Ga0193991_10288392

F037736

VPYRVQLDGLQILWFLANPLWTHGMGESGSKTFTGWLLMGAADANHIWWLNINPPQADLLLHLNSYRI

Ga0193991_1029800

Ga0193991_10298002

F071259

MKRKQSRIIIGTAIGAAVIAVAIDHTRQRLPQAEKQLASQDAVIIIDEGEELPAENSSDCGKPAGRGRQASPCSL

Ga0193991_1030079

Ga0193991_10300792

F042909

MVDLINFIGNLNLGTFIVIWTSTIFSVIFIILLLFSVSQMNKETIKICKKVKILIEGLSEKLNLGNDDIIF

Ga0193991_1030430

Ga0193991_10304301

F073570

MNEPINQIVGNLNTTLHLQMSQNKVSVGSLTGAQVDNKKTSHKYTIENDLIVYEKYDRHGKLISRVPWLPKTIDEKV

Ga0193991_1031203

Ga0193991_10312031

F073262

ANNHLEGLRAPVGIATQLLALQSATNTMGTNFNVSLDRPKTVATLQDKCPMLIVSLLVVCEVTAMADSPVHWSTVHPMLKATEWAACHANALDSTGSETNKLVPVTSPPLVQDMGNGHFAASSANNPTEGISIFCIQPSCMPRHQEHLNCNRTFELLV

Ga0193991_1032627

Ga0193991_10326271

F004052

MRILTMIVLFSLTALLCACDQRHAASDVDPELGLECFESHRAALPPGSQYEGIEKLADNTLTIRIMNGVDVVTLDCGL

Ga0193991_1032671

Ga0193991_10326711

F104552

LFLSRIACCQVWALLLLLGLLVPAQAAEALETDALPQAQAALERLEQQLASARTATAQELKALKKEIAKVRSSAQDCVQRAEPKIEILDSELAILQPAKPKDTQKKTAEEAQPAEQAEAPVSPAIARQLQELLSRKASLEGRIANCKLVLLGSSDLDSKVDDDLRSLQTRQLLTRGPDLVSVLQANLDERKRWLDFTGQLAVTSTGWDAI

Ga0193991_1032884

Ga0193991_10328841

F090406

IVVLAGLAACSTTLTSVDKEGGNVYALPPTVVDEMLKDAMSTEISTGTLRRGSKPYPSYLGEVTWGSLDKDTITASARPAKGRKLDGTIIDGYVFEVTRKGTAPATGEPTVKRIFAKLQNDAELTGTGVAFVEFTD

Ga0193991_1033595

Ga0193991_10335951

F040603

MYYTKHKTLADTSETALFTVPAGYVLWVNYIFIANHGGSTNNVSCWREDGAGVDQLYFLDNNSLNSGAKEILGGQADAPIFVLHNGDVVKAQTGSAGDVEIAFTFKLMNEPAAFPNFNGS

Ga0193991_1034080

Ga0193991_10340801

F059360

MTLFKEVLVPANLVPAAAVIREGQALSEITGRKESVDCNISYMLKFKA

Ga0193991_1042285

Ga0193991_10422851

F081352

LYSEHRNYILLDHFSRIYYDPXLMFLADVSLMIRLIRKISTITLACLLVLNLTAGAAVVVEHCPPLLCSSSPMDIDHCDGMLNFAFPMQGCCGDCNDIFCDLIKNPLQDANAVNASPFQGSCYPFFLGNVDPIAESGTWVAWSAPRYLFFAALAWSQIPLYIENLALIIXNHHLSA

Ga0193991_1046244

Ga0193991_10462441

F024678

MRVALKLFLFFIGMALSMLGIMVALHSQQHTILGVLILFSGMTTIWGS

Ga0193991_1052652

Ga0193991_10526521

F080062

MQLTLPKILWFVAALGLAWGINQWRQQAAAHVLAAAQEGDRDAAESWVDRALRESQCELHEASDYLASEATRQYVRRPGYVETFVDKLYAGGAARLELCESDALGFR

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300019720: Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? BLC_2-3_MG

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences