Basic Information | |
---|---|
IMG/M Taxon OID | 3300021272 Open in IMG/M |
GOLD Reference (Study | Sequencing Project | Analysis Project) | Gs0131209 | Gp0238796 | Ga0213899 |
Sample Name | Switchgrass-associated microbial communities from reclaimed mine lands soil in West Virginia, United States ? Hamp_Shaw_2 |
Sequencing Status | Permanent Draft |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Published? | N |
Use Policy | Open |
Dataset Contents | |
---|---|
Total Genome Size | 20412757 |
Sequencing Scaffolds | 16 |
Novel Protein Genes | 16 |
Associated Families | 16 |
Dataset Phylogeny | |
---|---|
Taxonomy Groups | Number of Scaffolds |
All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 1 |
All Organisms → cellular organisms → Bacteria | 4 |
All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 5 |
All Organisms → cellular organisms → Bacteria → Proteobacteria | 4 |
All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium 8X | 1 |
All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium | 1 |
Ecosystem Assignment (GOLD) | |
---|---|
Name | Switchgrass-Associated Microbial Communities From Reclaimed Mine Lands Soil In West Virginia, United States |
Type | Environmental |
Taxonomy | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil → Switchgrass-Associated Microbial Communities From Reclaimed Mine Lands Soil In West Virginia, United States |
Alternative Ecosystem Assignments | |
---|---|
Environment Ontology (ENVO) | terrestrial biome → land → soil |
Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Soil (non-saline) |
Location Information | ||||||||
---|---|---|---|---|---|---|---|---|
Location | USA: West Virginia | |||||||
Coordinates | Lat. (o) | 39.458 | Long. (o) | -79.073 | Alt. (m) | N/A | Depth (m) | .1 |
Location on Map | ||||||||
| ||||||||
Zoom: | Powered by OpenStreetMap © |
⦗Top⦘ |