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Sample 3300021285
3300021285: Enriched fungal communities from goat fecal pellet, Isla Vista, California, United States - Alfalfa, Gen5, Rep 1, Penicillin and Streptomycin
Overview
Basic Information
IMG/M Taxon OID 3300021285 Open in IMG/M
GOLD Reference (Study | Sequencing Project | Analysis Project) Gs0118397 | Gp0242242 | Ga0214509
Sample Name Enriched fungal communities from goat fecal pellet, Isla Vista, California, United States - Alfalfa, Gen5, Rep 1, Penicillin and Streptomycin
Sequencing Status Permanent Draft
Sequencing Center DOE Joint Genome Institute (JGI)
Published? N
Use Policy Open
Dataset Contents
Total Genome Size 103564988
Sequencing Scaffolds 7
Novel Protein Genes 7
Associated Families 2
Dataset Phylogeny
Taxonomy Groups Number of Scaffolds
All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter 1
All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp. 1
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Fungi incertae sedis → Chytridiomycota → Chytridiomycota incertae sedis → Neocallimastigomycetes → Neocallimastigales → Neocallimastigaceae → Neocallimastix → Neocallimastix californiae 1
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Fungi incertae sedis → Chytridiomycota → Chytridiomycota incertae sedis → Neocallimastigomycetes → Neocallimastigales → Neocallimastigaceae → Piromyces → unclassified Piromyces → Piromyces sp. E2 1
Not Available 2
All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp. YE315 1
Ecosystem and Geography
Ecosystem Assignment (GOLD)
Name Determining The Genomic Basis For Interactions Between Gut Fungi And Methanogenic Archaea
Type Host-Associated
Taxonomy Host-Associated → Mammals → Digestive System → Large Intestine → Fecal → Goat Feces → Determining The Genomic Basis For Interactions Between Gut Fungi And Methanogenic Archaea
Alternative Ecosystem Assignments
Environment Ontology (ENVO) Unclassified
Earth Microbiome Project Ontology (EMPO) Host-associated → Animal → Animal distal gut
Location Information
Location USA: California
Coordinates Lat. (o ) 34.4149 Long. (o ) -119.841 Alt. (m) N/A Depth (m) 0
Location on Map
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Associated Families
Associated Scaffolds
Sequences