NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Sample 3300021316

3300021316: Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States ? S.485 (Metagenome Metatranscriptome)



Overview

Basic Information
IMG/M Taxon OID3300021316 Open in IMG/M
GOLD Reference
(Study | Sequencing Project | Analysis Project)		Gs0114516 | Gp0225735 | Ga0210351
Sample NameMetatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States ? S.485 (Metagenome Metatranscriptome)
Sequencing StatusPermanent Draft
Sequencing CenterDOE Joint Genome Institute (JGI)
Published?N
Use PolicyOpen

Dataset Contents
Total Genome Size178975793
Sequencing Scaffolds67
Novel Protein Genes76
Associated Families71

Dataset Phylogeny
Taxonomy GroupsNumber of Scaffolds
Not Available32
All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales1
All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Fragilariophyceae → Fragilariophycidae → Rhabdonematales → Grammatophoraceae → Grammatophora → Grammatophora oceanica1
All Organisms → cellular organisms → Bacteria → Proteobacteria1
All Organisms → cellular organisms → Bacteria → Terrabacteria group1
All Organisms → cellular organisms → Eukaryota6
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium1
All Organisms → cellular organisms → Bacteria2
All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1
All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta2
All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira pseudonana1
All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae → Naviculales → Naviculaceae → Fistulifera → Fistulifera solaris4
All Organisms → Viruses → Predicted Viral1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Tolypothrichaceae → Tolypothrix → Tolypothrix campylonemoides → Tolypothrix campylonemoides VB5112881
All Organisms → cellular organisms → Eukaryota → Sar1
All Organisms → cellular organisms → Archaea1
All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae → Naviculales → Berkeleyaceae → Climaconeis → Climaconeis cf. scalaris1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1
All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → unclassified Gemmatimonas → Gemmatimonas sp. SG8_281
All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira oceanica2
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium1
All Organisms → Viruses → unclassified bacterial viruses → environmental samples → uncultured marine phage1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosomonas → Nitrosomonas halophila1
All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae → unclassified Bacillariophycidae → Endosymbiont of Durinskia baltica1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
NameEstuarine Microbial Communities From The Columbia River Estuary, To Analyze Effect Of Nutrient Fluxes, A Time Series
TypeEnvironmental
TaxonomyEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine → Estuarine Microbial Communities From The Columbia River Estuary, To Analyze Effect Of Nutrient Fluxes, A Time Series

Alternative Ecosystem Assignments
Environment Ontology (ENVO)estuarine biome → estuary → sediment
Earth Microbiome Project Ontology (EMPO)Free-living → Saline → Water (saline)

Location Information
LocationUSA: Washington
CoordinatesLat. (o)46.286Long. (o)-124.052Alt. (m)N/ADepth (m)0
Location on Map
Zoom:    Powered by OpenStreetMap ©


Associated Families

FamilyCategoryNumber of Sequences3D Structure?
F000203Metagenome / Metatranscriptome1619Y
F000344Metagenome / Metatranscriptome1257Y
F004408Metagenome / Metatranscriptome439Y
F004874Metagenome / Metatranscriptome420Y
F007402Metagenome / Metatranscriptome352Y
F007982Metagenome / Metatranscriptome341Y
F011154Metagenome / Metatranscriptome294Y
F011987Metagenome / Metatranscriptome284Y
F014821Metagenome / Metatranscriptome259Y
F016664Metagenome / Metatranscriptome245Y
F017093Metagenome / Metatranscriptome242Y
F019586Metagenome / Metatranscriptome228Y
F019658Metagenome / Metatranscriptome228Y
F021217Metagenome / Metatranscriptome219Y
F021307Metagenome / Metatranscriptome219Y
F022216Metagenome / Metatranscriptome215Y
F023254Metagenome / Metatranscriptome210Y
F024000Metagenome / Metatranscriptome208Y
F025483Metagenome / Metatranscriptome201Y
F026012Metagenome / Metatranscriptome199Y
F027186Metagenome / Metatranscriptome195Y
F027234Metagenome / Metatranscriptome195Y
F030134Metagenome / Metatranscriptome186Y
F031021Metagenome / Metatranscriptome183Y
F031322Metagenome / Metatranscriptome182Y
F032671Metagenome / Metatranscriptome179Y
F035771Metagenome / Metatranscriptome171Y
F036101Metagenome / Metatranscriptome170Y
F036368Metagenome / Metatranscriptome170Y
F037791Metagenome / Metatranscriptome167Y
F038082Metagenome / Metatranscriptome166Y
F039486Metagenome / Metatranscriptome163Y
F041807Metagenome / Metatranscriptome159N
F045462Metagenome / Metatranscriptome152Y
F048786Metagenome / Metatranscriptome147Y
F052281Metagenome / Metatranscriptome143N
F052686Metagenome / Metatranscriptome142Y
F052976Metagenome / Metatranscriptome141Y
F054544Metagenome / Metatranscriptome139Y
F055443Metagenome / Metatranscriptome138N
F057770Metagenome / Metatranscriptome136Y
F058542Metagenome / Metatranscriptome135N
F062310Metagenome / Metatranscriptome130Y
F062365Metagenome / Metatranscriptome130Y
F064356Metagenome / Metatranscriptome128Y
F064726Metagenome / Metatranscriptome128Y
F065440Metagenome / Metatranscriptome127Y
F068326Metagenome / Metatranscriptome124Y
F069484Metagenome / Metatranscriptome124Y
F069529Metagenome / Metatranscriptome123Y
F069706Metagenome / Metatranscriptome123Y
F070130Metagenome / Metatranscriptome123Y
F071970Metagenome / Metatranscriptome121N
F073595Metagenome / Metatranscriptome120Y
F077451Metagenome / Metatranscriptome117Y
F078248Metagenome / Metatranscriptome116N
F078249Metagenome / Metatranscriptome116N
F078730Metagenome / Metatranscriptome116Y
F079376Metagenome / Metatranscriptome116Y
F079410Metagenome / Metatranscriptome115Y
F080526Metagenome / Metatranscriptome115Y
F086339Metagenome / Metatranscriptome111Y
F087402Metagenome / Metatranscriptome110Y
F092033Metagenome / Metatranscriptome107N
F092303Metagenome / Metatranscriptome107Y
F093890Metagenome / Metatranscriptome106Y
F094641Metagenome / Metatranscriptome105Y
F094642Metagenome / Metatranscriptome105Y
F098390Metagenome / Metatranscriptome103Y
F098745Metagenome / Metatranscriptome103Y
F100053Metagenome / Metatranscriptome103N

Associated Scaffolds

ScaffoldTaxonomyLengthIMG/M Link
Ga0210351_1025148Not Available592Open in IMG/M
Ga0210351_1028213All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales1072Open in IMG/M
Ga0210351_1030381All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Fragilariophyceae → Fragilariophycidae → Rhabdonematales → Grammatophoraceae → Grammatophora → Grammatophora oceanica522Open in IMG/M
Ga0210351_1036321Not Available580Open in IMG/M
Ga0210351_1037241All Organisms → cellular organisms → Bacteria → Proteobacteria711Open in IMG/M
Ga0210351_1040118Not Available516Open in IMG/M
Ga0210351_1040330Not Available643Open in IMG/M
Ga0210351_1044674All Organisms → cellular organisms → Bacteria → Terrabacteria group722Open in IMG/M
Ga0210351_1051235Not Available503Open in IMG/M
Ga0210351_1052887All Organisms → cellular organisms → Eukaryota845Open in IMG/M
Ga0210351_1061911All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium618Open in IMG/M
Ga0210351_1078293All Organisms → cellular organisms → Bacteria681Open in IMG/M
Ga0210351_1083164All Organisms → cellular organisms → Eukaryota630Open in IMG/M
Ga0210351_1094525All Organisms → cellular organisms → Eukaryota642Open in IMG/M
Ga0210351_1095341All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria916Open in IMG/M
Ga0210351_1098819Not Available511Open in IMG/M
Ga0210351_1105758All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta720Open in IMG/M
Ga0210351_1114122All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira pseudonana674Open in IMG/M
Ga0210351_1124848Not Available646Open in IMG/M
Ga0210351_1126543All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae → Naviculales → Naviculaceae → Fistulifera → Fistulifera solaris648Open in IMG/M
Ga0210351_1130071Not Available611Open in IMG/M
Ga0210351_1137701Not Available558Open in IMG/M
Ga0210351_1144172Not Available734Open in IMG/M
Ga0210351_1147021All Organisms → Viruses → Predicted Viral1134Open in IMG/M
Ga0210351_1151094Not Available523Open in IMG/M
Ga0210351_1158334Not Available579Open in IMG/M
Ga0210351_1162615All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Tolypothrichaceae → Tolypothrix → Tolypothrix campylonemoides → Tolypothrix campylonemoides VB511288660Open in IMG/M
Ga0210351_1170584Not Available594Open in IMG/M
Ga0210351_1170669Not Available587Open in IMG/M
Ga0210351_1188805All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae → Naviculales → Naviculaceae → Fistulifera → Fistulifera solaris572Open in IMG/M
Ga0210351_1189217All Organisms → cellular organisms → Eukaryota576Open in IMG/M
Ga0210351_1194646Not Available594Open in IMG/M
Ga0210351_1203678Not Available655Open in IMG/M
Ga0210351_1215288All Organisms → cellular organisms → Eukaryota → Sar761Open in IMG/M
Ga0210351_1221181All Organisms → cellular organisms → Archaea726Open in IMG/M
Ga0210351_1221911Not Available503Open in IMG/M
Ga0210351_1225741All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta561Open in IMG/M
Ga0210351_1225965Not Available1167Open in IMG/M
Ga0210351_1231280All Organisms → cellular organisms → Eukaryota989Open in IMG/M
Ga0210351_1234184Not Available659Open in IMG/M
Ga0210351_1237338Not Available700Open in IMG/M
Ga0210351_1257513All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae → Naviculales → Berkeleyaceae → Climaconeis → Climaconeis cf. scalaris2927Open in IMG/M
Ga0210351_1261191Not Available784Open in IMG/M
Ga0210351_1268303All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium709Open in IMG/M
Ga0210351_1282269All Organisms → cellular organisms → Eukaryota732Open in IMG/M
Ga0210351_1283353Not Available2103Open in IMG/M
Ga0210351_1289271Not Available753Open in IMG/M
Ga0210351_1292267Not Available697Open in IMG/M
Ga0210351_1297596All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → unclassified Gemmatimonas → Gemmatimonas sp. SG8_28572Open in IMG/M
Ga0210351_1300881All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae → Naviculales → Naviculaceae → Fistulifera → Fistulifera solaris613Open in IMG/M
Ga0210351_1302952All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira oceanica702Open in IMG/M
Ga0210351_1303544All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira oceanica616Open in IMG/M
Ga0210351_1306117Not Available1010Open in IMG/M
Ga0210351_1307038All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium558Open in IMG/M
Ga0210351_1314821Not Available513Open in IMG/M
Ga0210351_1322893Not Available1359Open in IMG/M
Ga0210351_1323012Not Available814Open in IMG/M
Ga0210351_1337324All Organisms → Viruses → unclassified bacterial viruses → environmental samples → uncultured marine phage539Open in IMG/M
Ga0210351_1345352All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosomonas → Nitrosomonas halophila591Open in IMG/M
Ga0210351_1346438Not Available732Open in IMG/M
Ga0210351_1347061All Organisms → cellular organisms → Bacteria619Open in IMG/M
Ga0210351_1349613Not Available533Open in IMG/M
Ga0210351_1353718All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae → unclassified Bacillariophycidae → Endosymbiont of Durinskia baltica511Open in IMG/M
Ga0210351_1358481All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium585Open in IMG/M
Ga0210351_1362947All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae → Naviculales → Naviculaceae → Fistulifera → Fistulifera solaris793Open in IMG/M
Ga0210351_1364889Not Available643Open in IMG/M
Ga0210351_1366019Not Available673Open in IMG/M

Sequences

Scaffold IDProtein IDFamilySequence
Ga0210351_1025148Ga0210351_10251481F045462GFVLQPNIQERDFARYAPYLQDLDPSTVRMFYHDLCRVAHDHGIYMPAYEEYRPEATFSQIECGDTRTASVPKFCQSNVQRWEAIIHHHLKRDKVIPSTHPQANEIKHNPNGYEALMLLICPYHPGFTENGILIKPHPQQGRRSLEDHFRRCEFYYYGQECYLGTRHTWDDPIHMIRFLNSCQNSGVLRTLYNQER
Ga0210351_1028213Ga0210351_10282132F019658MKVSKIKNKDYKLFKYNLLKLQIYSSKPFFISDSFSNSILEQIEAYLKQALKIIFEYHTYQFKILFVGFPIISKTKQMKLIDFTNHNFIPKKSXISGIFRNRFSILTYLKLVQSQNFSKSLRLLLEIKTKPHLVVIFNQTIEANLVHEFYKAGIPILSFDRNLSNTFKTAYKTFGNFNFVERNIKLTFFFLFYSLLKKSPLDKRKILKTAYLSN
Ga0210351_1030381Ga0210351_10303811F094641VDQEYNLMQALYIAKVIMEIHNGVSEHGVCFSQNYIYQKSIKLFGEKGRKAAGKELDQLHQRNCFEPIDVIELTPEEKAQAMEALMFLQEKKDGTTKGRMVYNGKPTREWLSREDSASPTAALESIFLTSIIDAKEERDVMSADVPNAFIQTPMPDDNKKVIMKITGVLVHLM
Ga0210351_1036321Ga0210351_10363211F078730MDYTNIIQPKRLTNMQEMEVHVNGPDGANRLFMYSGMAEVELCGGLPHPRWSL
Ga0210351_1037241Ga0210351_10372411F077451GRSSPGRWAGLAASFTELGVDLDTAKKFGPIVIDYVKHHGGEDIVDKLRTALKL
Ga0210351_1040118Ga0210351_10401181F065440KCCANGRLSSASDSDNFDEELMNEHELDPMPSFLARIISTCTDISRKSSIYNNLVAMAGTAVCNYSELNGWLRRGPGDQCVFINGRVHHYMKIASSTSQNCGISYFVFDDIASLAGSADARDVDPQILSDICKGLRDENPYCIELRFLGAEARERAEGIVVVPRMTNQPTH
Ga0210351_1040330Ga0210351_10403301F011987LTALVNVCGVAHSHWKTHPIYLALKRDGVTQFNMAFIHLTAADIDGLQYEKGGVLVPLELNFKMMLRALLAFYHHESHKQRGGINILEADVPLKFRVFRNSEYDPTKEITPWGLAIAHNKGLSDWNKLIKPSAWDFKPFREANNWIDYKEMFMITLEAQNLTHLVDPTYVVVDGDLHKAQQNFMYKVLRDNMLHHEAKSIVKAHSKTKDVALIW
Ga0210351_1044674Ga0210351_10446741F036368SAEQHGCQFHRAWHASDGSAFYAIAKWESREGASAFFEEWQIEDEPGEIAVILEGDVGLVPQP
Ga0210351_1051235Ga0210351_10512351F064726ESVMVATQEVVTKATDNERKYRSPNRILARSFRLARDKWKQKYMDTRAALKRARQLATERGDSRDRWRAECDAALQQVRAAEALAQERLQELEQLRARELEVKKTFLTDAS
Ga0210351_1052887Ga0210351_10528871F017093VKRKHGSNPYLDPMRITQVNDNGTVKLVKIADNNGGAVSQTWNIRNIEPRMA
Ga0210351_1054131Ga0210351_10541311F100053VDDAKVAHKIWRSSVPKLKGSTVRETGQRKLQSLVKVPQELIQLQQKVCIGIDVFFVNGHIFFMTYSRKICFTTVTHLLKHKVSDVWAAMHKIYQMYLLRGFHIVEIAGDGESAWIADQVASLPTNPVLDLAAASQHVGLIERNIRFLKEKTRSIRHSLPFERIPAL
Ga0210351_1061911Ga0210351_10619111F070130MTKVRRIPDSPASQPEFFVGWWEIMYHIRDGEQTDVTGIIEHVDAAGNFTVFRDGERIGAGHHVDFTVDPDGFTNVQEVTGAHTQTGRELAVYRFSGDVLEVCKASEHTGGPTSFASPRGSGWTHVAIRRISDDDPRIRAQR
Ga0210351_1065827Ga0210351_10658272F038082MSAHVKREQHLHSNLPKAFAYIMNDYCTDGLKTRLIALPDYESTIRDDPLALLTAIKTCVHENARTQYPPVTISTHWDRLLKLKQAEEEDTPSYAKRFEQQLETVKGYIGSTFTDGFAEQMPEYKAHAYKHDAGKITTLLDTHVADVDARKALADDLIDLLSHYKPKETH
Ga0210351_1078293Ga0210351_10782931F041807MARLELTLNFPKSFQIKTFNVKSEKKLSPLAKLILQSVQ
Ga0210351_1083164Ga0210351_10831641F054544MRTTQTNDNGTVKLVKVANNNGGAVSQTWNIRNIEPRMA
Ga0210351_1094525Ga0210351_10945251F039486SLPTNPMLNLAAASEHVGLIERNIRFLKEKTRSVRHSLPFERIPAVMLIRMVLHTVQFMNSFPRKGGLKHYPPSAIMNGTRLHMNQLQLKFGSYCQVAEDVTPRNSLAARTRGAISLGPSGNLSGGQRFLTLDTGKLVVRNRWKELPMTSDVIDRVNLLGRSERSMLVFKDRLGRVIGDYTPTENVAGDDEESIVNDLYSSIPPAPAGMPGVSS
Ga0210351_1095341Ga0210351_10953411F032671AHCGRLIEELQLQRLPNLAVRDRSALRVSLYPSGTTTFTDTEAIDGGRSYSLWDFMSEINAVVLYVTEGDDATFTLLQRTTGRKVELPSDPKLSPDRARLVTADFCASRCSNELALWRVTRDGVRKESTWRPHASWSDVVANWKDAETVVVEFSVAGTPARSSISRRLADREWVRAQAP
Ga0210351_1098819Ga0210351_10988191F048786VDSVDDVRATFVDMCSNGTGAQCRSYFVVLSLNGYATHAIFDDHNKRRFMFMDYITYQGVTEHVAEQMMLQDLERLFRKSRSSLEKFGFPTPDNVPTELEEAISLWMQPDVMARQGQLLDGLIATHPNNDEQQMAFDSIMNSIIDFKNANRDDITEHVFHFIGGPGGTGK
Ga0210351_1105758Ga0210351_11057582F026012QFKHFYYVRDDISYLLKSNPIERDFLLQALYSIVISLQNNLSINFFDMWIYEIYINKVSTHNKFMSQKSQNLEPGEYITIKLAYGSSVSQEKN
Ga0210351_1114122Ga0210351_11141221F025483MLRTAEIDMATSVEPSDIDAFITNAAWAIRSTYHTVLKASPGAAIFGRDMLFDIPFLADWNKIGEHRQRQTDRNTERENCSRRVWDHKVGI
Ga0210351_1124848Ga0210351_11248481F019586NKITPVHETIIDALTGILQYVPEDDDDEIGIARVAFITSLLTKADDDLFLWAQSTTVGSPEVAARVAPSLRKNMNIAGAIATLSSELQNNKNKIRGRMLNVIDLINDDSDLKDQLSQVLPQERNMEELDTAELNAVNKVGEYLSHAKAVPTRVNGKLKSVRGYEAFWKIAHGDGVYIYVPVGHPGVSYLEDLYKEGTDLTLTNIFQGAPTEPRKR
Ga0210351_1126543Ga0210351_11265431F031322ALRTFGCRAWVRPPGRRAAKLIPNSRKGIFLGFIPNTDKNIIWYDTETHVVKIAKHVRFDEGMNDLPPDLVPPNVVHLQRTQNGEPLPAETEETSVDQFTFHLNPFSYTMVKGVKVTDDDPSYGLTLATDEINNRAYVADVKKDSTADKMYATHKSTLKNVKGAYLVGINGKQVFGKDDAISMLRQLYDERAKNLQLELAIERKLTSAETWRAVAE
Ga0210351_1130071Ga0210351_11300711F087402MARAKVVEYDYYQFLRILQRAGNAGQRIDKTDSRWGEYVRENKINEVAATAIARQKFENATPVIIAEGGDADGLYFFSKDDEACLRLTALE
Ga0210351_1137701Ga0210351_11377011F068326VRLCILYNERENNVARKLGVSTVTLRNWVGLKNTSNNFDSNTLQQNTSSEEIDLSEARGGSKFRKDIPNFYAALNEPTGIMENVKELNDSSAHCLHQNIETIAYNLIDKIDTLQRTQIDIHHIEIITDRVFHNIEKLKNEIRANNSYVQSLEHMNRNLEAKIDVLLMQNEAITQKCTQFELLGE
Ga0210351_1144172Ga0210351_11441722F007982MRPVASWMLSAVVMALLVACTERAPQDKEEARAKGRDTDETVFDDMIQTQDRARAVEGLTLGRTGELDAAIERSEGETADDAR
Ga0210351_1147021Ga0210351_11470211F024000SAFKRLILKTPLCQHLLLSMSSILLTKLTDQECEKGQLTQRPPIPYATPKAETILKASRETVKMKTSEGEVKMAVLGDNPGPEEYLQHLNSFTRMLSRKKLDEEMTKLTKAVLATTARARKLARTPSDETEPQTSVRLGLGEAAEVEIKKAEAEEAVKAGLVYDLFRKTLKEDPELQWDRIVDDMHSKDPWEDLRGAKHDGLRRKSIASLWDCIDFHKLTVYSVDAVERQRFYMLCNLKQPAKSSIRSHVTRMETLNKYLGLLPTIKNSPQAVASTELGNVPFNETTLASIVLSHLPVAWRTQYALIRVLVPESPRASLVDFENIEKLLAEKANEAARANKAKAATALNRADEHVPRKGKREHGGGPIKGAPKKGRTA
Ga0210351_1151094Ga0210351_11510941F078248EEFGLPDMVFDMHPCGLHVYYPEKIDGQYGFVQTVAENMKLFMKRQIDGALKARHLYETLGYPSNADFESVLRAGGIGGCSVTVEDAKVAEKIWGSSVPRLKGSTVRESGHRKPQSLVKVPRELIKLQQKVSIAIDIFFVNGQIFFMTFSRKICFTTVTHLVNRKVNGVWAAMH
Ga0210351_1158334Ga0210351_11583341F069706PVPRNAGQAPSLQGTLGRIPSHLSLAVSAASASVLPTSGYFGSQKHQAVEINARRVICPKHARGAHGSRDYARHQEAATKAIPYPFASAKHFHAKNADGEASNKYANLQSEYAGNLAKIKTLKRRMDAWDMISPFVIPDFIDPYALSVENRWGDRKLTGVNLLKNWGKVTLKQCRNWQRDSFDYACTEDLTSM
Ga0210351_1162615Ga0210351_11626152F022216VSDRPASSGPTDEQRRRIRRTTLVLALVALGIYVAFIASGVMQARQ
Ga0210351_1170584Ga0210351_11705841F036101STESETIKVKLPDGTTVSVKAFSSGNNEDYILHWATIFRLFEQKGLKSDVEVRAKVAGDQMGVLKDIHKALGGSTAAGRKKTPSDAEKLELEETEKSVSEAKAEFQKAVLKPFDLVRQLLIGEARTQWDKIVKEMFDRDTWTGVNGKTHDGARMRTWKSLMDCIELHKLTVLPADAAEKQRFYVQQVVRKPQRVTIR
Ga0210351_1170669Ga0210351_11706691F027234MRRSMMFAALVGGLSVAAASVAVAGPVSDQFRSGIFGLPWNAGKAAIEAKYPGGAWDQDDTGHARYCAASQQPLLKLPPQHQTRELCFLIGSDGTLASATARMDASLPALLAIVNRSRTIFGDFDSVRRDEAAIQSRSTA
Ga0210351_1188805Ga0210351_11888051F014821YEAATCRIHLCDDDPYEELLHNVDEVETLLQDPVVLAATHRLLDPDADLDELRVSALQSEAISPEERALPRFSRRALKRLPTWDLWHKNELEQLDQMKALGMFGSPIKLPEGGILMRFHWQYRIKVNGKRRSRLCCDGSPRAAPEVHSTTNTYASCLEHPVFRLFIALCAADNLTIYGGDAKDAFAHSPG
Ga0210351_1189217Ga0210351_11892171F055443SISDLVAGLPTMPRLDWAAASQHCGLIERNIRFLKEKIRSLRHSVPFERVPGIMVVRMVLHVVKFVNGFPRKGGPKLYSPGEIMTDRRLHADDLRLGFGTYCQVAEHVEPRNSLAPRTRAAISLGNSGNLSGGQVFLALDTGHTITRHQWVVLPMPPAVIARVNVLGKAEPSILTFTDRHGREIGDYPQDE
Ga0210351_1194507Ga0210351_11945071F052976LIQCKKPIMSDGVYKCDACGRNNFKSQRGLSKHKLENKACRAHLHARFGSKADSKIAAAYLAVDTVHKPQACDAGSQNAMHYSDMSAGLGAKRAKFMSLPDKNFVSAWAMKAQSLLEQSQAELDSDSDVGSDTGMHDAENDAILPPTEESSARQRIMLDNFKDYAKRANDF
Ga0210351_1194646Ga0210351_11946461F057770NFILSPNSFKALLGKHYNGYKLECDDDKKSFHFSLNHKMRKSGSVLLRGTTRGGLCYTRPAVPPMPMTEGTAEMSLDMADRAAISMVEDHPKNSYRHEMKLHALSAKAERLLWHQRLAHCGDEQLCRAHMFSDGVPEITRGKDSALDNCPVCLAANMRSRNRGDGETRTATKPGQGLSLDFSFAGQHSKNATDPKKM
Ga0210351_1198563Ga0210351_11985631F092033GARVQIAGKNFEPDWGLYNGCIGMVMEIVFEDNQNPLDGCHPKYVIVEFPEYCGPAWMEDKPKWVPITPTIEMNCEKHYCQLGYVPLALAYAKTCHTFQGQTVGKNCSIECIIVQPGTRDFEGKCPGLFYVFLSRATDIGTEGNRKTSAIFFDTNEMNRDRIRDLTNSLTSGKEYVKATK
Ga0210351_1203678Ga0210351_12036781F021217ATGSILTANRYEAHLDGGSQASTTNDKAILWGFKWYTNKNPCRIRLICADGKTPIVPEGYGTVRIPADNAEGYVPIKCYYTPDIPNFILSPNSFKALLGKHYNGYKLECDDDKKTFRFSLNHKMRKSGSVLLRGTTQGGLCCARPAVSPMPTTEGTAEMSLDMADKAAISMVEDHPKNSYRHKMKLHALSAKAERLLWHHRLAHCGDEQLCQAHMFSD
Ga0210351_1215288Ga0210351_12152881F098390KTKSKPKPTRPKKTIATKPSGDRSEELEDALPKPGKDASAPTHLRRSTRLQQQALETARMNFLDSNPYLPMDSIGMYEAATCRIHLCDDDPYEELLHNVDEVETLLQDPVVLAAIHRLLDPDADLDELRVSALQSEAISPEERALPRFSRRALKRLPTWDLWHKNKLEQLDQMKALGMFGLPIKLPKGGILMRFHWQYRIKVNGKRRSRLCCDGSPRAAPEAHSTTNTYASCLEHPVFRLFIALCVADNLTIY
Ga0210351_1221181Ga0210351_12211811F064356MIHGVKDQPVHENFTVSDSQGNLITGIDTTNGFTPYVYDPSGAEVTGLVSGFFTELGDGNYRYTFTPNANGVWYVNVTNLEYFPWGKNDDVYVDTSDLSGIYEIVIRTLGLVHHNFYIDQATYDEFGNLISSRVRIYNSAANVGTNAGVIETYMLTADAEACGQFSFWKQVVSP
Ga0210351_1221911Ga0210351_12219111F079410VKILAWQNRAKYIQDTKKGIFLGYRTSTLKNVVWYDPLTDRVKYGYHVRFDEGFNDLPLSKLPPNVVLMDRREERIPAETLTITIPPFTTSEHPFFHEDDVTVKVVCASDLYGFELREDDCMKRVYISDFKKDGKGTKGRRSCNTICSTERATRRKYRGAYITAIDD
Ga0210351_1225741Ga0210351_12257412F021307MDQILYDHKCRCKKKISITKKRKVTKRSEGKPLRYPNLDEIRAKTFQIKSEQKLSLIAKLVLNSFENKYLYYAIDDILYLLKSNPIER
Ga0210351_1225965Ga0210351_12259651F030134VIITKFNSFRTKNLQKKCKDKIQPVLQRFKLRSRIFLKVEQTYFKNFYIFQEKMIQHRGSKHSYR
Ga0210351_1231280Ga0210351_12312802F062310SGLRKKLSSLDTELGLMEMVLAGIKSTLTRQPFSVSQDLRNLAAAQEAIGWTNLFKGRISKQWIERQRHHIGDKATTKNNALNWATTVIDYFFTQWFKVWDQRNLDRHGNDYQGRANKLKDVAFREMTHLYTFEETVPDDIRWLFQTPLEECLHWPLFRQRAWITNWEHIIKKEYATQMETG
Ga0210351_1234184Ga0210351_12341841F011154MRSDEKPLRIESSRPGRFRAWANRSYPEGIRLLLCISTGGRLWRPPEGGLPNERRRKAGQSERPNREGHAASAGPVKTFQAVGDVKNDTADLWTKGNLRVKRRDPWHRANALSKAAADPALSGEDADKKTQTCLYLVRKPVAQPPVEAS
Ga0210351_1237338Ga0210351_12373381F007402HHAGKFLPKTKGFFPHDFTLIASVVGESVIGHGIGGKHIPIMARLANGQTLE
Ga0210351_1249110Ga0210351_12491102F052686MTEKPRGKAPVPPTAGHDPGHLGVNDRGNVTWEWADERDLQADDTLGAAERVRALVDPSLQVKDDDDDPMS
Ga0210351_1251443Ga0210351_12514431F000203HALFPMPTLGAIQAAGFPTLFSMASGMFGLIAGPSSALRSLNY
Ga0210351_1257513Ga0210351_12575132F080526MPNPLLPVAGAVVGVGTGTMISESALMTLKAIGLFYVGIAKTCYTSTGSKRIACAVAALACGTALIPGPHQGPFIVACAAASRGANKL
Ga0210351_1261191Ga0210351_12611913F086339YIMAKQKMMPNMQTYGGQESPGYKPPSGSAGVKAKGMFSSNSNPLAVPQKGSSIGPGYGNTDRMKAMASKNAQAAKENLRGKPC
Ga0210351_1268303Ga0210351_12683033F031021YTDKAGRRHWRWPATNAAAERGGRDAEADSRPRAGLPSPQQTSFALLPLRGK
Ga0210351_1282269Ga0210351_12822691F069484MAEACYTARATTKQQVLDGIDKLTLQTNEHGQYTHDAILLLQKGIQRVLVSQFNPSDPGKGMVKLLDDGDNILTRIQSTDAITAGSVLKSAKKRADDLSTTTGKTILPTFTTRTEAQEEADRLNVINQSVIGAKEGVVEAVSKLVGSDITDAILRTADGSDFKSIDDYTLYEVMKVAINGANRPTTNE
Ga0210351_1283353Ga0210351_12833531F027186MTTNSNFNFTKNSIITLELPFSEHIEELRQRIFLVFGIILL
Ga0210351_1289271Ga0210351_12892711F079376TLKASVWLLPGVGDHGMFDIVSTRQPGRPCVSFEVSRVCWTTEEGGRQMRYRESDSLVVPEKAGNAAGGKEATHGSVV
Ga0210351_1292267Ga0210351_12922671F058542MANFVPNPAIWGPQHWEQPTDLPHAKKLLGNLRQAKTKAKRKEDSFPLAKINGVIQQAHLEWSRLDKEITDHLIANGGRANATHYMLCHNPNGLSNGDTDEETIQRKKACITIARTMVHNHHEEWIKVKALNLWIDTFLPKFNPAIFTPDQ
Ga0210351_1297596Ga0210351_12975961F035771MGAVEKSRQWRSRQFSVLTYWKYAPRAKLAAAFPS
Ga0210351_1300881Ga0210351_13008811F062365SCNMQKPSLSSVDDEDDGDIYREGRDDIMIMSSINAVDIHRISWSPASDVQVEPVDVQCDDDNPDAIRAQIDTGAHVSCTDQLHMLHGYRKFTRSRPSPVKLMPATVDSDAVPKGIGYLHVPAKNAQGYLAVPTCYTPCLRTAAIDERDLVKAAKVSVKDIRSDSITKHKDAGTFTYHARHRMKSSKDVIVHGVLIDDKCYTGA
Ga0210351_1301592Ga0210351_13015921F092033KKYRGVTKHFAKQRSQSAIPTVVNICRGAKVQLTGKNFEPDWGLYNGSIGTVIEIVFKENEHPLEGFQPEYVIVDFPQYCGPSWMESQKTWVPIPAVEMNCDKRCCQLQYIPLSLAYAKTCHTFQGQTVGKNHPISCIIVQPGTRDFEGKCPGLFYVFLSRATDIGSSDDRRSSAIFFDGPDMTNDRITDLTRSLTTGREYVKVSKRNQWVKYL
Ga0210351_1302952Ga0210351_13029521F078249ETDVRLFSPQTYHQMHGGYSEVHSDCIRMLLKTSTIEIQHVREEHPVVFDSFVSGKAKKALASNMRSGLCHTRLNALDFFHDNDLGNLGRSPQNSVLDSEHFSNFCGACVGAAENENISAAQTELLKWHWKLGIGIYRIQEMMRERHYEDPDGRTTILPAII
Ga0210351_1303544Ga0210351_13035441F078249ETDVRLFSPQTYHQMHGGYSEVHSDCIRMLLKTSTIEIRHVREEHNLPVVFDSFVSGKAKKALASNMRSGLCHTRLNALDFFHDNDLGNLGRSHQTNVLDSEHFSKFCGACVGAAENENISPAQKELLKWHWKLGIGMYHIQEMMRERHYEDPDGRTTILPAIIQPKNASARNCIVPPCQSCLLARVKKRSPNVSRTQPLEDHE
Ga0210351_1306117Ga0210351_13061171F069529FDEGFNDLPLAQLPPNVVLMDRREERAPAETLTITIPPFTTSEHPFFHEDDVTVKVVCNSDMYGFELSEDNCMKRVYISGLKKDGKGTKGRRSCNTMCSSERATRRKYRGAYITAIDDEEIVTIDQAKEKFAELRAKKVESFTMILAREPKPSKAMTRRAYDELELPAFDLDDNLGEDYFAPEEDLEGDSSATPSQKTTEFGADHVPSIGTKISKDFGSKGCFEGEVVSGPHNVTVEGDNMVVWKVCYEDGDREEMTASEIAHWKAPVKEARASKTKSKSKPTRPKKTIATKPSGDRSEELEDDLPKLGKDASAPTHLRRSTRLQQLALETARMNF
Ga0210351_1307038Ga0210351_13070381F092303ELAAIALLLPVLVLMSRIEDRGRSALIAAALGTWLVAVALAPVLAESHRAVAELPEVGEYLRRNAPPASQLAGKAFSYVALAWLLAGTGLLPHVAAGVTVLFVLLLGLLHVGAVAPAYGWIDLVIAMIAGFMITRWMPRGAGR
Ga0210351_1314821Ga0210351_13148211F073595MHREGHGVSAGSVKTFRNVGDVKNGTADLWTKGDLRVKRRDPWFR
Ga0210351_1322893Ga0210351_13228931F052281MMNTEVVDYTHFDGHTYRFSSTSKKENESKYLCNKYRLAGDTALWGTRRQSMSTGGTTPGEKCPGSLIVKHEFGMSGGDHPYIKVEHKCVDNREVTSAVARGVKDYRPQLERISPNIENGNFLSRNVIEEVLREFNNAEKNDKNLWQNITGGNAMRKWIPDMYDNNVKRVALKVIVEIALKGYITIVQGRYPTLKYFKVGALKSLPGAKSQYVGHGRRLHSDYPQSVEELEPRFRPVSIIVGLNSFNFTWLNDRTSRESEIRKMTVYPGEMIMFTNHCLHAGGENSTNEEQTRLFAYLASDESHFPSGEVTTWDWQRRDNNPLISKPSRNANTAIVRRPGTNQIRLISGRVASVGGVPDR
Ga0210351_1323012Ga0210351_13230122F071970VFHVCVACFLHAGVECVACGIEILDVLDIRFEWLRLYESLLTYVAHMDLVGDPLQDTCHARASEILITKIHKIFYLGIRRIFM
Ga0210351_1337324Ga0210351_13373241F004408SSDVHFLKFLNKSQVDSFYGLTNEEQESVKLYISEKSFFTQKDVLGLISEALSTKNESLEDRIIRLMPDSIKPIWNQLNESNRKSLLSQSRLFPEEVLQTESQIEHFWNTRNLKKNESVTKKLVSHEALIQEDRVNDAEMKAIMERFKNI
Ga0210351_1339931Ga0210351_13399311F038082AFAYIMTDYCTDGLKTRLAALPDYLTSIQDDPLALLKAIKTCVHENAVTQYPPVTIQQHWSRLLQLKQSNDEDPPTYAKRFEQQLETVKGYVGNTFTDGFAEHMPDYKANAYKHDAGKITALLATHVTDDAARQALATDLHDLFSYYKPKETQAQLEIKAQVRSEFEAHLFLRSASRAKYGSLLKT
Ga0210351_1345352Ga0210351_13453523F037791MEVAAFHPPPDRFDPLRRRLVSVALFIAFINRVNGDL
Ga0210351_1346438Ga0210351_13464381F000344MRPKSTHAALSGVGEHPARESESAKWCAEGKERVANA
Ga0210351_1347061Ga0210351_13470611F004874MGFNAKQPGKIKRADIIMLGAFIVVTVALLLWALKG
Ga0210351_1349613Ga0210351_13496131F093890ASPTFLNRQVYPLQLGLTDIGQFHQNDLKTFEVWTQWSNPSSEKIVVKITFTLFDRDSADAQLGEDGEDDSLMVVTETVTIPEQASNWGKFVQLTAIGQKLNQGFDHPSEGSGLELYLDAQVISVKHLPSE
Ga0210351_1353718Ga0210351_13537181F098745MKKLFAKDKENRQSVKQLELKQFILKQISTNSNFIKTVRWNALYELNCTKE
Ga0210351_1358481Ga0210351_13584811F016664MNQVIQGMPKRDEAKNTVEIVVHVSENLEERQRSNLIVALENKNGIVSAEFCPLRYHLMLVRYDKEQYSSQDVLSAVSGQKLQARLIGPI
Ga0210351_1362947Ga0210351_13629471F031322WVRPPGRRSAKLIPNSRKGIFLGFIPNTDKNILWYDTETHAVKIAKHVRFDEGMNDLPPDLVPPNVVHLQRTQNGEPLPAETEETSVDQFTFHLNPFSYTMVKGAPVTDDDPSFGLTLASDELSHRAYVADVKENSTADKMYASHKSTLKNVKGAYLVGINGKKVFSKEDAISMLRQLHDERAENLQLELAIERKLSSAEAWRAVAEHNIMDPSAVPDVDHHHQLTLADIRSISAARYPHLDFSEASISTEEMEMVVQAIQSQA
Ga0210351_1364889Ga0210351_13648891F023254RSCNAICSTERATRRKYRGAYITAIDDEEIVLLNQAKEKLKELRNKNVDTFTMILAREPRPSKSMTRRAYDELELPEFDLDENLGEDYFASDGNLEGDSSMTASGETNAFGTDYVPPIGTKISKDFGTKGFFTGTVTSGPHIREKDGDDVTVWKVQYEDGDREDMTASEIAYWKMPTEEVQTSQTKAKSKKPKQTMATKPSGDRSEELEDAIP
Ga0210351_1366019Ga0210351_13660192F094642VAPLAARFVMVVGREDGTFTIEASHWGGADLVDSREEVEATELLSLRNLLGAEAGESSERLEAGEGVRLLGGNMDVAISLSV
Ga0210351_1376290Ga0210351_13762901F052976MSEAVHKCEHCGRDDFKSKRGLSKHKFENKGCKDHLKARFGSTADTKIAAAHLPVDTVHKPQRCAAGSQNAMHYPDVADGLGAKRAKCMSLPDKDFISAWLMKAQSQLEQSQVDTDLDTDIGMYDAENDVVLPPTEESSARQKLMLENFKDYAKRAND
 ⦗Top⦘



Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.