NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Sample 3300021539

3300021539: Marine sponge Stylissa sp. microbiome, Papua New Guinea CO2seep, Upa-Upasina 'control', st32ic 200bp no Eukaryotes last



Overview

Basic Information
IMG/M Taxon OID3300021539 Open in IMG/M
GOLD Reference
(Study | Sequencing Project | Analysis Project)
Gs0117787 | Gp0124816 | Ga0224716
Sample NameMarine sponge Stylissa sp. microbiome, Papua New Guinea CO2seep, Upa-Upasina 'control', st32ic 200bp no Eukaryotes last
Sequencing StatusFinished
Sequencing CenterUniversity of New South Wales
Published?N
Use PolicyOpen

Dataset Contents
Total Genome Size54822198
Sequencing Scaffolds48
Novel Protein Genes54
Associated Families48

Dataset Phylogeny
Taxonomy GroupsNumber of Scaffolds
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium6
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Caudoviricetes sp.1
Not Available32
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa2
All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.1
All Organisms → cellular organisms → Bacteria3
All Organisms → Viruses → Predicted Viral2
All Organisms → Viruses → unclassified bacterial viruses → Synechococcus phage S-EIVl1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
NameSeawater And Marine Sponges Microbial Communities From Papua New Guinea Co2 Seeps
TypeHost-Associated
TaxonomyHost-Associated → Porifera → Unclassified → Unclassified → Unclassified → Stylissa Sp. → Seawater And Marine Sponges Microbial Communities From Papua New Guinea Co2 Seeps

Alternative Ecosystem Assignments
Environment Ontology (ENVO)Unclassified
Earth Microbiome Project Ontology (EMPO)Free-living → Saline → Water (saline)

Location Information
LocationUpa-Upasina 'control' site, Papua New Guinea
CoordinatesLat. (o)-9.828217Long. (o)150.820517Alt. (m)N/ADepth (m)N/A
Location on Map
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Associated Families

FamilyCategoryNumber of Sequences3D Structure?
F000479Metagenome / Metatranscriptome1092Y
F001407Metagenome / Metatranscriptome702Y
F001905Metagenome619Y
F003751Metagenome / Metatranscriptome470Y
F004325Metagenome / Metatranscriptome443Y
F006793Metagenome364Y
F008031Metagenome / Metatranscriptome340Y
F008560Metagenome331Y
F008942Metagenome / Metatranscriptome325Y
F013419Metagenome271Y
F013777Metagenome268Y
F015565Metagenome / Metatranscriptome253Y
F017657Metagenome239Y
F018810Metagenome / Metatranscriptome233Y
F022150Metagenome / Metatranscriptome215Y
F023046Metagenome / Metatranscriptome211Y
F024258Metagenome / Metatranscriptome206Y
F024330Metagenome206Y
F025263Metagenome / Metatranscriptome202Y
F027869Metagenome193Y
F031451Metagenome182Y
F032680Metagenome / Metatranscriptome179Y
F034580Metagenome / Metatranscriptome174N
F035329Metagenome172Y
F037769Metagenome167N
F043240Metagenome / Metatranscriptome156Y
F043451Metagenome156N
F044550Metagenome154N
F047978Metagenome149Y
F051941Metagenome / Metatranscriptome143N
F058430Metagenome135Y
F059684Metagenome / Metatranscriptome133Y
F067817Metagenome125N
F068499Metagenome / Metatranscriptome124Y
F069320Metagenome124N
F069743Metagenome / Metatranscriptome123Y
F077401Metagenome117N
F080158Metagenome / Metatranscriptome115Y
F082820Metagenome113N
F087060Metagenome110N
F090258Metagenome / Metatranscriptome108Y
F090511Metagenome108N
F092220Metagenome107N
F093358Metagenome / Metatranscriptome106N
F098759Metagenome / Metatranscriptome103Y
F100481Metagenome102N
F101300Metagenome102N
F106146Metagenome100N

Associated Scaffolds

ScaffoldTaxonomyLengthIMG/M Link
Ga0224716_1000104All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium1276Open in IMG/M
Ga0224716_1000563All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Caudoviricetes sp.678Open in IMG/M
Ga0224716_1003156All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium643Open in IMG/M
Ga0224716_1005387Not Available521Open in IMG/M
Ga0224716_1009175All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa728Open in IMG/M
Ga0224716_1011376Not Available561Open in IMG/M
Ga0224716_1012704Not Available829Open in IMG/M
Ga0224716_1018262Not Available779Open in IMG/M
Ga0224716_1018789All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium716Open in IMG/M
Ga0224716_1022806Not Available1155Open in IMG/M
Ga0224716_1027396Not Available1130Open in IMG/M
Ga0224716_1037722Not Available700Open in IMG/M
Ga0224716_1039600Not Available550Open in IMG/M
Ga0224716_1041277All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium668Open in IMG/M
Ga0224716_1041476Not Available771Open in IMG/M
Ga0224716_1043265All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.747Open in IMG/M
Ga0224716_1044181Not Available1979Open in IMG/M
Ga0224716_1044368Not Available1939Open in IMG/M
Ga0224716_1045175Not Available642Open in IMG/M
Ga0224716_1045486Not Available677Open in IMG/M
Ga0224716_1046540Not Available2785Open in IMG/M
Ga0224716_1046762Not Available506Open in IMG/M
Ga0224716_1047800All Organisms → cellular organisms → Bacteria1178Open in IMG/M
Ga0224716_1049136All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium572Open in IMG/M
Ga0224716_1050551All Organisms → cellular organisms → Bacteria650Open in IMG/M
Ga0224716_1053857Not Available656Open in IMG/M
Ga0224716_1053913Not Available1687Open in IMG/M
Ga0224716_1054330Not Available629Open in IMG/M
Ga0224716_1060301Not Available767Open in IMG/M
Ga0224716_1061005Not Available560Open in IMG/M
Ga0224716_1061958Not Available1505Open in IMG/M
Ga0224716_1062973All Organisms → Viruses → Predicted Viral1174Open in IMG/M
Ga0224716_1063258All Organisms → Viruses → unclassified bacterial viruses → Synechococcus phage S-EIVl671Open in IMG/M
Ga0224716_1063489Not Available621Open in IMG/M
Ga0224716_1064044Not Available627Open in IMG/M
Ga0224716_1065258Not Available769Open in IMG/M
Ga0224716_1067544Not Available922Open in IMG/M
Ga0224716_1068834All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa644Open in IMG/M
Ga0224716_1069039Not Available761Open in IMG/M
Ga0224716_1069561All Organisms → Viruses → Predicted Viral2762Open in IMG/M
Ga0224716_1074628All Organisms → cellular organisms → Bacteria806Open in IMG/M
Ga0224716_1078868Not Available1881Open in IMG/M
Ga0224716_1088193All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium1312Open in IMG/M
Ga0224716_1090804Not Available911Open in IMG/M
Ga0224716_1095168Not Available585Open in IMG/M
Ga0224716_1095930Not Available563Open in IMG/M
Ga0224716_1096977Not Available528Open in IMG/M
Ga0224716_1098246Not Available1296Open in IMG/M

Sequences

Scaffold IDProtein IDFamilySequence
Ga0224716_1000104Ga0224716_10001043F035329MATRKSLVLISGLTQELNSSSDKLDFAGNSTSDLSEG
Ga0224716_1000563Ga0224716_10005632F008560MLKYFKVEDLIDSFHTDEKNKGRRYREFLYHCYTKFEKEIKKIKSKKIINRYITMRNNTLSHLIQNEKEITLKLSK
Ga0224716_1003156Ga0224716_10031561F003751DEGVFGWPGVEAFELIGFAKVTNLVGTKASHKSFDLTVPSPDRRPDDRVRDDRTSLVVQASTDRPAYIYGASVAIAQDLPAGGLATFPASPVTADLGGTTGELLLLGPNNGGVPFGVPSTQQNGLAAASSSIQASSSLFAQGLTDTTTGDLPFWTVVTGGGITAANAANSMMYKVTADTTFKVFNVDAIANTTVSGDGVFISQADSDAGRAAYI
Ga0224716_1005387Ga0224716_10053871F023046PFPEFKARFSATVGWHFSRDLTRRLLIGGCGQSTYLLSMAEITPGSSFEPSKPREQKLGY
Ga0224716_1009175Ga0224716_10091751F022150LVGTGRAISILFGINGVRNQRSHLVGAPFPEFKARFSATAGWHFSSDLTRCLLIGGCGHSHVSVKYG
Ga0224716_1011376Ga0224716_10113762F090258MKKFNKMESNLICDSLDYYVAHLEAEIKALEEKGRTSIFAPGFYPMIKDELVNKIKQDMTKKQRVXHYT
Ga0224716_1012704Ga0224716_10127042F001905MMFPFYIRMAILLCVGAFAPIIIHHIIMKLWDVSILRAAEYTFIACIPIAVWMAEKINERWNDEDK
Ga0224716_1018262Ga0224716_10182621F059684SHLEVAVEGRKLAYTVHFTSYKAVPRSRRQSRDMK
Ga0224716_1018789Ga0224716_10187891F008031MATYKSDAGAILEPGNQINRLSSFNHEGVKGWPGVEAFEQIGFVKINNASADKASFKSFDITVPSPDRRVSDRVRDDRTTLVVKASSARPAYVYGASIALAQDDPSGGLPSFPASPITADLGGTNTEVLLLGPNNSGSPFGVPSTQQNGLAAASSSLTFSGTTISQGTGAVTTAKLPFWTVVTGGGITAANAANSMMYKVTADTTFK
Ga0224716_1022806Ga0224716_10228062F098759HILTPILRLCLSLPTLVRQGYSAFFVSILSGESNELISMMKAWGYSSEKASGMISIKLV
Ga0224716_1027396Ga0224716_10273963F031451MTKRILKEGDRVRYSSTFCRTIGAVTGFTPQARGVITRLWGKGEFAEIVWDFPDPEGKLCGGAHVSALERLK
Ga0224716_1037722Ga0224716_10377221F006793MRRWILPNAHTTNTRGIMTNNRSTNEQIQERVNFAADELAKGKRAMDISKKLASKYNVSIQQARDYVRQAKPILTQSISPNDRAFIFSKVMSCLEQDRLDARKEENLKDQTKSTAGMVKMVSLLTSIDQVGSWDSAREAEGDYLFRNFSEVARKRKKYGDLDSLDNTTDSETPF
Ga0224716_1039600Ga0224716_10396001F059684MGGHLEVAVEGRKLAYTVHFTLYKAVARSRRQSRC
Ga0224716_1041277Ga0224716_10412771F008031MATYKSNAGAILQPGNQINKLSSYNKEGVHGWPGLEFYEQIGFVKVSNKSGTKANFKSFDITIPSPDRRPDDRVRDDRTSLVVPASSTKPAYVYQASLAIAQDIPAGGLPTFPASPVPADLQGTNGEFLLLGPDNGGAPLGVPANQPSGLAAASSLLDIGASGIAQGTGMTSTDGTVDGIIPFWTVVTTGGI
Ga0224716_1041476Ga0224716_10414761F098759PILRPCLSLPTLVPQGYSALFVSILSGESKELITMMKARGYSDEKASGMISIKLV
Ga0224716_1043265Ga0224716_10432652F032680MSKYVGRIMDEVYDNFRNHFDDNEEKVWFLEELIEQLQTELEYYSNE
Ga0224716_1044181Ga0224716_10441812F004325MKHKKASTTEKADKFLQNIGTAGGAIGSPQLVGFGGMDTMSQVAAGNRDEYANIRMKQGDTRVVEGAKMPSDLDASYLKLNLPGSPLPANGLLVPQNLRAAERNQDMIGVSEQMFLAKYLPAAGLTQLPVGQPPLESKKGKK
Ga0224716_1044368Ga0224716_10443682F087060MYTIITTKPMTQSHTTSNDTSAKQVVRTLSCITQGKPVDTGDAPQTKKFDPVADQDNRLMQMLELSLAIKDKKSEYDDLRKSFTNDLKAALDDNEENPKIRHSENDRVHVYLSKRRVYKYSDKLTAKRLKLEAQMADLKDEEAKEVRHNKAELTKETFTVSFKG
Ga0224716_1045175Ga0224716_10451751F069743MQSHTINLSIAPSDYDALTGFLMGPFSDSVRQLSFNVSIVNDAIPEDDEDFTARLTLLPADQARLRNRVTVQPD
Ga0224716_1045486Ga0224716_10454862F092220MEPVKTIEPITEKDEIQKFQELKEQVFKEYADYSLNKLYNFNELLIDTIHQLQFKQMAMQELITHRLDNICPKETNSN
Ga0224716_1046540Ga0224716_10465406F024330MSQNDKLPAGTENYPVNNYIPKSNPNSRPKKFTKYAYVIKNQVEWDRMHKRYVVLEGKGKQETQPIPLLHKDNRKAYEDACDVCKWHYKNREARTLYVTDGTYISPTAIKRMRELP
Ga0224716_1046762Ga0224716_10467621F067817MLRPNTELLREDVMQGQPRFVDISKGTLTAETKRSRAVNKATKY
Ga0224716_1047800Ga0224716_10478001F013419MRESKYSFLYRNSDGHVMRPESFLNINKGRTLSSSQLRMLGIEKIKNPSYKRQAASIKRQAAST
Ga0224716_1049136Ga0224716_10491362F058430VKDTLNFTSTTFDVDVPSQSAANGNANVSLPVDFCFYLVSTGTITNINQFFPLFTQSIPQVSENQILSTTLTEKLPLINHPTVQSGALNFAGANNETAPKQRGLMLRRGQALYVAASGATALTNGFYCNIQGGFY
Ga0224716_1049808Ga0224716_10498081F100481MYNHYPGSRGVTDIVSVTMPLLSIKDLAVAISTRAGPAEDDPPLYKLGLKPVQAVCKGESGALN
Ga0224716_1050551Ga0224716_10505512F013419MIRESKYSFLYRAHDGSIMKPENFLNINKGRTLSSSQLRMLGITKIKNPSYKRQASSRKLDKQPE
Ga0224716_1053857Ga0224716_10538572F047978TLLLFSLDATAGEVTEFKPRPAAVEQGSDTYVGILLSEEDFRKLLQDKIDTNAKVAECDVDKKVCTKLQEQYKLSIKNLQETIQKDNTWFKRNKGSLGLLTGVVIGVGTSIAIVRAVQPS
Ga0224716_1053913Ga0224716_10539134F090511MLSPFKSKILQRLGLNHVAYHGNKNCNEDWLNGYFQAKKDLEMQLNQIMITTDDLD
Ga0224716_1054330Ga0224716_10543301F015565MLLFCAKTIVTESRNFELARLKKKKKENILAVRMATFWFGTFAMLFSATGCVVRHENTRK
Ga0224716_1060301Ga0224716_10603011F044550MYVMGRKLVRARKLYYLIIDDESKYCLLKLDTESKDYIELDHDLDLFALSRLLFQQDHDHNNKRIQSKKE
Ga0224716_1061005Ga0224716_10610052F001407MSIIKQDQRRLDNIANMYWKTSGEMREMWGRKWYELIKIIGRKLDESKNERSAADTRQIH
Ga0224716_1061958Ga0224716_10619582F043451MPNIQPWLYPQHPSPDRVAYTPTRSAHILEYQEEMIDAEGNVYWMTVDSTTLGGATSVKEFLEQMKDFYETKSCRKDKMQS
Ga0224716_1061958Ga0224716_10619585F077401MTMKTFWAWKHDINSTHKNMSGYTKILARDMNSAYKKAHKHYKHHMFNSDFNVSVMSGETDKHGYAKEVQYSTGKWTRKAWSTYKYFHSLEPEMQERVHNHYKE
Ga0224716_1062973Ga0224716_10629732F101300FPNTGIESVIPGTRQDREGNVIDSRDNPGVFNDFGYAPTGNFYQVPEYNDDPEGSLSGLLYYQTRWCKHIYAALWSMKHDEGNDQFSFEGRYQQSGPNVTITIVNHGLLPDKRVAIDFTSGDLLDGQYVVSSVPDENTIVIVYPFSGTTQGDCTVSNLKIHEYVNTWLLEPNDQPAGNALEKFYKNFEKEQERTRKAAERMALLGYGLPWTGNKDVEFGQRNAPEEVAQFDPTLVTMKLTDTIRRDGRELSRDGRLLNNAASTLMSMQKVLNLDFKLIEDVRIGLVNQPLTDFTPDFQFGEIEGGVYLNGVPETGAGVSSMDCSTYNPGVEQSINVDAGLYLN
Ga0224716_1062974Ga0224716_10629742F069320MSIKLPDSPVSRISRCFKCHHLAVEFWNPKYNRSYTVEEWLTICEEGRDS
Ga0224716_1063258Ga0224716_10632582F080158MATYKSSAGAILQPGNQINKLSGYNDEGVFGWPGIEAFELIGFAKVTNLEADKASNKSFDLTVPSPDRRPDDRVRDDRTTLVVQASSDRPAYIYGASVAVAQDLPAGGLATFPASP
Ga0224716_1063489Ga0224716_10634891F015565MLLFCAKTIVKESRKFELAHLKKKKKEKHFGRLVTFWFGTFAMLFSTPGCVFRHENTRR
Ga0224716_1064044Ga0224716_10640442F018810MVNPQKPIVKLGTKLEKGVVTGIFHGKIEVTGEAGVQSLTFATVEKEVL
Ga0224716_1065258Ga0224716_10652581F068499RYSLLVSEMYSIREFSAFYSNLQVTSGQMASLPGHFRSPKVT
Ga0224716_1067544Ga0224716_10675442F027869MDTKKAKKAKNMAENALRMMALEEQMEAAQEADLQPEDGYINPMGRIGTVPPTTYSLGNMLNGTTTQSVINPET
Ga0224716_1068834Ga0224716_10688341F093358VSYKLMNLKIILLLIHCLVDMPTSQARLSYLVMSERYRIVRVMVSEDR
Ga0224716_1069039Ga0224716_10690391F000479MSKAVNILEVLEKAHQSPDKISERNKKAIVDAYGRALTMKKVLDDFIKVNRNLITDMGMILHGKDYTIHVSEKLSVKVDSNLVKEKLGEVEYHKCKVPTQYKTIQALPNE
Ga0224716_1069561Ga0224716_10695614F037769MSYIQTQTDKEDEKLLRRLLSEKMPEKDADKIISHVFSNLIKWTYEDAVLHLTQVFNFTEEESNQLIKEYDILSSTTKEVIMNPPPNFNATAPNDVKDYSANLWQARKCLSDAKKLINATALTPKDYENDEDFHEALLHRLHIAEHFISINKYIDEHLDFAKAHIPPQAP
Ga0224716_1069561Ga0224716_10695617F006793MTNNRSNNQQMEERVNYAADQLAKGKRAMDISKKLASKYSVSIQQARDYVRQAKPVLTQSISPNDRAFIFSKVMSCLEQDRLDARDQENLKEQTRSTGGMVKMVSLLTSIDQVGSWDSAKESEGDYLFRNFSEVARKKKKYGDLDSLDNSDMPF
Ga0224716_1074628Ga0224716_10746281F025263MAINANQLHVAKIYPGNYTNALRYWHEEKSVSFQNANGVDSTYPNHPVGGPVAVLFQPGSIAQQAVGYVDLSYQALGTNNQLSYYTKPYGSGQNSAEQPFLNGDVIVPSPDFHKDVRADITDGIKVPATAYVYRASLRLSGGDIVSSGVAGADSTPELTLVPAVGVGLKDDGTVVSGQFGASITGANSAIANGSTGSTNIFDSSSWAALGSETQWKLFTTTDLGGAAGSGLAQGSGVYDPRAAANKLSGDDKALAICEVCW
Ga0224716_1078868Ga0224716_10788683F051941MATSFKNMIYDLTPTTSEKTVYGVPTDSHSIINAFYVNNTDPFSSIFVEVRLDRGPNRLYVASTTSLFSVELASNQYLNLLTGPLVLEGGDKLVFTTNTTGRVQGTIAAMQVNREDQETTPIGSV
Ga0224716_1079505Ga0224716_10795051F106146PGNIQSVIQTVGFNIESILNELSKNSGGSGAVGTNATSKGEMFFNRDQLEFDDYDRQETTITLTDLPQGNNPFASTTKNVPVSMNDLFSEDWFVSQGYDTSYAENKVRENFIIYGLARANKPTGRLNVDDIKRASDAISIYGAKAPQDVITALKEVDRKIRQAQQGLLRAYPEIILRDPTFSNPEKTDKILRNLGLNPDDFATYLNQLTQSGTSPDANAI
Ga0224716_1088193Ga0224716_10881932F017657MMMDNNRKEALDKATKAKQKMAIEAEMMKQIQPTVPEVTAENIDMQPAIIPNPKPEGPVVGANVFNPGNLYPGISGTSKLAANWNPMMDPAAG
Ga0224716_1088193Ga0224716_10881933F082820MRKLIDGLAIASFVLSLTTVGAIGFGYLALTNKTNQEKIKNYAIGQVQKLLSDQLTKSIPSLPDATGDVVPVKPSLPKF
Ga0224716_1090804Ga0224716_10908041F013777MTKTFTMWGPTSTAHFKNLHDHYLKKNHVVHAYATPYHNDPADNPAAMWSFVMHEKRDLERIAFKTYIHPQGDFQNGYYDICDIEKGTFDSDNMNLGEVYPVILYAHHETILTVGCVVKTSDHPDIHGKEQLALWIYYPSAENIESFDMASGHIYE
Ga0224716_1095168Ga0224716_10951681F043240MWSIEAQKKPWNKTGGMTPLMVSTASAEALKSSESETMPPIIAWLHNVT
Ga0224716_1095930Ga0224716_10959303F008942RRGLFEGVKEKAMSKKEKGRKWDGKSRVSNDLYRKNFEIIFGKKIDKDKEELEGYYIHDGKIDVLTKKKS
Ga0224716_1096977Ga0224716_10969771F024258MRLHVNYACAIGTRLNLDLLCVAQNGVVLELHRIAASQNCQSCQFANKRAERGYYDESDIVLCVKLLNTCFSL
Ga0224716_1098246Ga0224716_10982462F034580MLALKNKQLTSSGQVTTKVSAGTNTLSAPARVVALNIKCGATQGKVDLIDNGSGGTVKYTIVTPAIGSGEDEYLQVNFPDTGLRFETDLFVFFNQATSVGVVYG

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