NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Sample 3300022784

3300022784: Microbial communities of marine sponge Stylissa flabelliformis from Great Barrier Reef, Australia - S10 Version 2



Overview

Basic Information
IMG/M Taxon OID3300022784 Open in IMG/M
GOLD Reference
(Study | Sequencing Project | Analysis Project)		Gs0120440 | Gp0149072 | Ga0242729
Sample NameMicrobial communities of marine sponge Stylissa flabelliformis from Great Barrier Reef, Australia - S10 Version 2
Sequencing StatusPermanent Draft
Sequencing CenterUniversity of New South Wales
Published?N
Use PolicyOpen

Dataset Contents
Total Genome Size35065252
Sequencing Scaffolds17
Novel Protein Genes18
Associated Families11

Dataset Phylogeny
Taxonomy GroupsNumber of Scaffolds
Not Available17

Ecosystem and Geography

Ecosystem Assignment (GOLD)
NameSponge Microbes In A High Co2 World
TypeHost-Associated
TaxonomyHost-Associated → Porifera → Sponge → Unclassified → Unclassified → Marine → Sponge Microbes In A High Co2 World

Alternative Ecosystem Assignments
Environment Ontology (ENVO)Unclassified
Earth Microbiome Project Ontology (EMPO)Host-associated → Animal → Animal corpus

Location Information
LocationDavies Reef, Great Barrier Reef, Australia
CoordinatesLat. (o)-18.833Long. (o)147.683Alt. (m)N/ADepth (m)N/A
Location on Map
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Associated Families

FamilyCategoryNumber of Sequences3D Structure?
F007683Metagenome / Metatranscriptome346Y
F010384Metagenome / Metatranscriptome304Y
F013612Metagenome / Metatranscriptome269Y
F020857Metagenome / Metatranscriptome221Y
F022150Metagenome / Metatranscriptome215Y
F038110Metagenome / Metatranscriptome166Y
F041611Metagenome / Metatranscriptome159Y
F073151Metagenome / Metatranscriptome120Y
F083784Metagenome112Y
F085218Metagenome111Y
F093358Metagenome / Metatranscriptome106N

Associated Scaffolds

ScaffoldTaxonomyLengthIMG/M Link
Ga0242729_100591Not Available751Open in IMG/M
Ga0242729_104947Not Available785Open in IMG/M
Ga0242729_110154Not Available752Open in IMG/M
Ga0242729_112916Not Available530Open in IMG/M
Ga0242729_114951Not Available874Open in IMG/M
Ga0242729_116571Not Available1150Open in IMG/M
Ga0242729_119433Not Available710Open in IMG/M
Ga0242729_122600Not Available567Open in IMG/M
Ga0242729_123539Not Available617Open in IMG/M
Ga0242729_123816Not Available646Open in IMG/M
Ga0242729_126164Not Available667Open in IMG/M
Ga0242729_126392Not Available530Open in IMG/M
Ga0242729_133895Not Available760Open in IMG/M
Ga0242729_135265Not Available671Open in IMG/M
Ga0242729_143760Not Available671Open in IMG/M
Ga0242729_149980Not Available593Open in IMG/M
Ga0242729_151104Not Available842Open in IMG/M

Sequences

Scaffold IDProtein IDFamilySequence
Ga0242729_100591Ga0242729_1005911F038110PAVSEDRGHMLKVDGPESLAISNRDVSYKLMNLKIILLLIHCLVDMPTSQARLSYLVMAERYRTVRMMVSEDR
Ga0242729_104947Ga0242729_1049472F013612MMSRLAMSLGLRFCVSRKDRTRGGGWVHLKGANSMAAFGLIFRGDLVGTGKAIFVLFGINGVGNKRSHLVGPPFPEFKAHFSATAGWHFSRDL
Ga0242729_110154Ga0242729_1101541F020857MLSTIKDYSGDIFVLFLQDYCALLESPMKMNFTLAVAPPFVHPMTSLPATPTHSVQKYGFFGEPTRRRQVAKYGNLKRCESVIFW
Ga0242729_112916Ga0242729_1129162F085218YRAESLPSQASYAVLAEESLTRPDFLQTLPAHQQYF
Ga0242729_114951Ga0242729_1149512F010384MQPQLAIWKRRIISLLVVNRCSLSWGSGKGLLEVYQRWTDAASAGDLKEVD
Ga0242729_116571Ga0242729_1165712F038110MVERCSPAVSEDRGHTSKVDGPESLAISICDVSYKLMNLKIILFLIHCLMDMPTSQARLSYLAMSDIAVRVVSEDR
Ga0242729_119433Ga0242729_1194331F020857VLFLQDYCALQELPMKMNFTIAVAPPFVHPITLLPATPTHSVWKYDLFSEPTRRRQVAKYGNLKRCESLSFCGDIESLEPSKF
Ga0242729_122374Ga0242729_1223741F041611MLELKFAIYYRAVSLPSQASYAVLAEESQAFFKHSLHTKSISNSAILRNDYISLLSDLCACVHIKKMASQGSHSSSERFESPCVTSNLEKAMGWCTAQ
Ga0242729_122600Ga0242729_1226001F083784MDFNDTPFNVTMEAETTVVSAEIPILNDEINEAEEEFVVVLEVVSDTTNSEEFTTNVTVCRIPASDCKCRAECLHGLN
Ga0242729_123539Ga0242729_1235392F010384MQPQLGIRKRFIRSLLGVDRCSLSWGSGRGLLEVYQGWTDAASAGDLEE
Ga0242729_123816Ga0242729_1238162F010384MQPQLGMWKRFIRSLLGMDRCSFSWGSGRDLLEVYQRWTDAASAGDLEEVY
Ga0242729_126164Ga0242729_1261641F010384MQPQLGIRKRFIRSLLRVDRCSLSWASGRGLLEVYWGWTDAASAGNLEEV
Ga0242729_126392Ga0242729_1263921F022150LVGPPFPEFKARFSATVGWHFSRDLTRRLLIGGCGQSHVFAKHG
Ga0242729_133895Ga0242729_1338951F007683LKGISFMHDTFSLMMSLPAMSFGDRFCFCRKGGIGGGGWVHPKDANSMATSGLVSRRNLVGTGRDISVHFSVNGVTNK
Ga0242729_135265Ga0242729_1352651F020857MKMNFTLAVAPPFGHPMMSLPATPTLSVRKYGFLSEPTRWRQVAKYGNLERCESLSFSGDIESLEPSKF
Ga0242729_143760Ga0242729_1437602F093358PESLAISIRDVSYKLMNLKIILLLIHSLVDMPTSQARLSYLVMAERYRTVRVMVSEDR
Ga0242729_149980Ga0242729_1499801F073151VSGFEKRGNFAQNAKFWHFSSYHHFKAVRASDFILGLEAHQAFCFTNPTFEAVDSLLSEA
Ga0242729_151104Ga0242729_1511042F013612YICHETFSFMMSLPATSLGLRFCVSRKGRTGGGEWVHSKGANSMAASGLVFRSGLVGTGRAISILFGINRVRNNRSLLVGPPFPEFKARFSATVGWHFSRDLARHLLIGGCGQSHVSLKY
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