NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Sample 3300022797

3300022797: Microbial communities of marine sponge Stylissa flabelliformis from Great Barrier Reef, Australia - S3 Version 2



Overview

Basic Information
IMG/M Taxon OID3300022797 Open in IMG/M
GOLD Reference
(Study | Sequencing Project | Analysis Project)		Gs0120440 | Gp0149080 | Ga0242736
Sample NameMicrobial communities of marine sponge Stylissa flabelliformis from Great Barrier Reef, Australia - S3 Version 2
Sequencing StatusPermanent Draft
Sequencing CenterUniversity of New South Wales
Published?N
Use PolicyOpen

Dataset Contents
Total Genome Size47274652
Sequencing Scaffolds31
Novel Protein Genes36
Associated Families16

Dataset Phylogeny
Taxonomy GroupsNumber of Scaffolds
Not Available30
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Porifera → Demospongiae → Heteroscleromorpha → Haplosclerida → Niphatidae → Amphimedon → Amphimedon queenslandica1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
NameSponge Microbes In A High Co2 World
TypeHost-Associated
TaxonomyHost-Associated → Porifera → Sponge → Unclassified → Unclassified → Marine → Sponge Microbes In A High Co2 World

Alternative Ecosystem Assignments
Environment Ontology (ENVO)Unclassified
Earth Microbiome Project Ontology (EMPO)Host-associated → Animal → Animal corpus

Location Information
LocationDavies Reef, Great Barrier Reef, Australia
CoordinatesLat. (o)-18.833Long. (o)147.683Alt. (m)N/ADepth (m)N/A
Location on Map
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Associated Families

FamilyCategoryNumber of Sequences3D Structure?
F010384Metagenome / Metatranscriptome304Y
F013612Metagenome / Metatranscriptome269Y
F015565Metagenome / Metatranscriptome253Y
F022150Metagenome / Metatranscriptome215Y
F024258Metagenome / Metatranscriptome206Y
F035204Metagenome / Metatranscriptome172Y
F041044Metagenome / Metatranscriptome160Y
F041611Metagenome / Metatranscriptome159Y
F043240Metagenome / Metatranscriptome156Y
F063409Metagenome / Metatranscriptome129Y
F068499Metagenome / Metatranscriptome124Y
F069743Metagenome / Metatranscriptome123Y
F073151Metagenome / Metatranscriptome120Y
F074458Metagenome / Metatranscriptome119Y
F076933Metagenome / Metatranscriptome117Y
F093358Metagenome / Metatranscriptome106N

Associated Scaffolds

ScaffoldTaxonomyLengthIMG/M Link
Ga0242736_100231Not Available736Open in IMG/M
Ga0242736_101112Not Available858Open in IMG/M
Ga0242736_104075Not Available976Open in IMG/M
Ga0242736_106673Not Available1352Open in IMG/M
Ga0242736_106863Not Available504Open in IMG/M
Ga0242736_108530Not Available1364Open in IMG/M
Ga0242736_108842Not Available567Open in IMG/M
Ga0242736_114417Not Available530Open in IMG/M
Ga0242736_114771Not Available1196Open in IMG/M
Ga0242736_117784All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Porifera → Demospongiae → Heteroscleromorpha → Haplosclerida → Niphatidae → Amphimedon → Amphimedon queenslandica548Open in IMG/M
Ga0242736_118046Not Available519Open in IMG/M
Ga0242736_121591Not Available536Open in IMG/M
Ga0242736_123224Not Available690Open in IMG/M
Ga0242736_125502Not Available557Open in IMG/M
Ga0242736_127643Not Available814Open in IMG/M
Ga0242736_135707Not Available530Open in IMG/M
Ga0242736_136357Not Available664Open in IMG/M
Ga0242736_142368Not Available608Open in IMG/M
Ga0242736_148095Not Available660Open in IMG/M
Ga0242736_149576Not Available518Open in IMG/M
Ga0242736_157479Not Available631Open in IMG/M
Ga0242736_161525Not Available597Open in IMG/M
Ga0242736_162699Not Available696Open in IMG/M
Ga0242736_165152Not Available533Open in IMG/M
Ga0242736_165922Not Available723Open in IMG/M
Ga0242736_166088Not Available1859Open in IMG/M
Ga0242736_166917Not Available508Open in IMG/M
Ga0242736_171497Not Available613Open in IMG/M
Ga0242736_171649Not Available686Open in IMG/M
Ga0242736_172243Not Available559Open in IMG/M
Ga0242736_176899Not Available509Open in IMG/M

Sequences

Scaffold IDProtein IDFamilySequence
Ga0242736_100231Ga0242736_1002312F010384QLGIWKRFIRSLLGVDRCSLSWASGRGLLEVYCGWTDAASAGHLEEVD
Ga0242736_101112Ga0242736_1011121F010384MQPQLGMWKRFIRSLLVVDRCSLSWGSGRGLLEVYQRWTDAASAGDLKEVD
Ga0242736_104075Ga0242736_1040751F010384MQAQLGIWKRFIRSLLGVDRCSLSWGSGRGLLEIYQGWTDAASAGGLEEIY
Ga0242736_106673Ga0242736_1066731F043240TWSIEAQEKPWNKTGGMTPWTASTASAGALKSGESETTPPIIAR
Ga0242736_106863Ga0242736_1068631F010384LEEVYSKFISGGQNQLRLRIWKRFIISLLVVDRYSLSWGSGRDLLEVYQGWTNADSFGDLEEVY
Ga0242736_108530Ga0242736_1085302F035204MPMPPCEPVFQVIESGRDGENLEKLSMETTVLNVRYVMHILGFHMTFNET
Ga0242736_108842Ga0242736_1088421F010384VYYKFIRGGQVQPQQGIWKRFIRSLLVVDRFRLRWGFGRGLLEIYYGWRDAAAAGDVEEV
Ga0242736_114417Ga0242736_1144171F063409QGGFEGVRTNPPCSLAKFIFNETAAVQGTIIQPCSGIATDGIQAIMQLLQGVVTYTSPVKVFATGIKNLAGLVSDSF
Ga0242736_114771Ga0242736_1147712F073151MTSSNLFRYVSGFEKRGNFAQNAKFWHFSSYHHFKAVRASDFILGLEAHQAYCFTNPTFEAVGNFLSEVVAVKPKV
Ga0242736_117784Ga0242736_1177841F010384MQPQLGIWKRFIRSLFGVDRCSLSWGSGRGLLEVYQGWTDAASAGDLEE
Ga0242736_118046Ga0242736_1180461F035204QMPMPPCEPVFQVIESGRDGENLEKLSMEATVLNVHYVIHIIGFHVTFNET
Ga0242736_121591Ga0242736_1215911F041611VLELKFAIYYRAASLPSQVSYAVLAEESQAFFKHSPHTNSISNSAILRNNYISLLSDLCACIH
Ga0242736_123224Ga0242736_1232241F035204PCEPVFQMIESGRDGENLEKLSTEATVLKVYYVFHIIGFHVTFNET
Ga0242736_125502Ga0242736_1255021F015565MGWCTAQWKMLLFCAKTIVKESRKFELARLKKKEKHFGRLATFWFGAFAMLFSAIGCVFRHE
Ga0242736_127643Ga0242736_1276431F074458MRSLTAKWFFKMAGILSAAFVFDDDLATELELTYAEANIKLLSRVANIALASSNTFSESGLLHW
Ga0242736_127878Ga0242736_1278781F010384FIRGGQMQPQLVIWKRFIRSLLRVDRCSLSWESGRGLLEVYWA
Ga0242736_135707Ga0242736_1357071F024258MRLHVNYACAIGTHLNLNLLCVAQNGVESELRRIAASQNCHSCQFANKRAERGYYDKSDVILCMK
Ga0242736_136357Ga0242736_1363572F074458MRSFFEMAGIPSAAFVFDDDLATELETYAKANVELLSRVVNVALASSDTFSESGLLHW
Ga0242736_140173Ga0242736_1401732F076933MIYANCGAIAVITSTTYMTIVELFDEYSAPFSPEVIRPLIMTPTSILNDIILSMETERSTKACC
Ga0242736_142368Ga0242736_1423681F022150MLTVKAITIIFGINGVRNKRSHLVGPPFPEFEDRFSATAGWHFLGDLTRCLLIGGCGQSHISAK
Ga0242736_148095Ga0242736_1480952F013612MMSLLAMSLGLRFCVRRKGRTGGSGWVRPKGANSMAASGLVLRSDLVGTGRAISVLFGINGVRNKRSHLAGPPFPELKARFSATAGWHFSRDLTRCLLIGGCGRSHV
Ga0242736_149576Ga0242736_1495761F010384MQPKLEIWKRFIRSLSGVDKCSLSWGFGRGLLEVYEGWTVAASAGDLEKVY
Ga0242736_157479Ga0242736_1574791F010384PQLGIWKRFIRSLFRVDRCTLSWASGRGLLEVYWGWTDAASAGDQEEVY
Ga0242736_161525Ga0242736_1615251F068499TASYSLVGSEMYSIRKFQAFYSHFQVTSCEMTSLPGHFR
Ga0242736_162699Ga0242736_1626991F063409PPCSLAKFIFNETAAVQGTIIQPCSGIVTDGIQAVMQLLQGVVTYTSPVEAFATWITNFD
Ga0242736_165152Ga0242736_1651521F010384FIGGGQIQPQLGIWKTFIRSLLGVDICSLSWGSGRGLFEVYRGWIDAASDEDQEVVY
Ga0242736_165922Ga0242736_1659221F069743MQSHTIHLSIAPGDYGALTSFSLGPFNNSVRQLSFNVSIVNDMITEGNETFIANLTLLPADQARLRNRVTVQPDSATVTILDDDGTIAIDKSQLLKVHDIVGI
Ga0242736_166088Ga0242736_1660883F010384MQPQLGIRKRFIRSLLGVDRCSLSWGTGRGLLEVYMGWTDAASAGDQEE
Ga0242736_166917Ga0242736_1669172F074458MRSLTAIEMAGIPSAAFVFDDDLSTELETYVKPKIELLSRVANVALASGDTFSESGLLHW
Ga0242736_168640Ga0242736_1686402F041044VRSLVSNSIYAKKEIALLVPTKSLLKTNPDAAAVPPFLLTQNLSPKDIAGSDIMKLKVSRRHMKSLGMKGLSKLA
Ga0242736_171497Ga0242736_1714971F010384MQPQLGIWKRLTRSLLGVDRCSLSWASGRGLLEVYWGWTDAASAGDQEEVY
Ga0242736_171649Ga0242736_1716491F010384MQPQLGIWKRFIRSLSGVDRSGRGLLEVYLGWTDAASAGYLEEVY
Ga0242736_172243Ga0242736_1722432F093358VDGLESLAISIRDVSYELMNLKIILLLIHCLVDMPTSQARLSYLFMAERYRTVRVMVSED
Ga0242736_175808Ga0242736_1758081F076933MIYANCGAIAVIASTTYMTIMEFFDECPAPFSPEMMMVDXSXNQRYILNDIHVLSMETEISTKAAVEGNRFW
Ga0242736_175835Ga0242736_1758351F022150PPFPEFKARFSATAGWHFSRDLTRRLVIGGCDHSHVSVK
Ga0242736_176899Ga0242736_1768991F022150LVGPPFPEFKARFSATAGWHFSRDLTRRLLIGVCGQSHVSAKHG
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Biomedical Sciences Research Center "Alexander Fleming"
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