NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Sample 3300023277

3300023277: Microbial communities of marine sponge Stylissa flabelliformis from Great Barrier Reef, Australia - S6 Version 2



Overview

Basic Information
IMG/M Taxon OID3300023277 Open in IMG/M
GOLD Reference
(Study | Sequencing Project | Analysis Project)
Gs0120440 | Gp0149083 | Ga0242739
Sample NameMicrobial communities of marine sponge Stylissa flabelliformis from Great Barrier Reef, Australia - S6 Version 2
Sequencing StatusPermanent Draft
Sequencing CenterUniversity of New South Wales
Published?N
Use PolicyOpen

Dataset Contents
Total Genome Size47685343
Sequencing Scaffolds47
Novel Protein Genes53
Associated Families20

Dataset Phylogeny
Taxonomy GroupsNumber of Scaffolds
Not Available44
All Organisms → Viruses → Predicted Viral2
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Porifera → Demospongiae → Heteroscleromorpha → Haplosclerida → Niphatidae → Amphimedon → Amphimedon queenslandica1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
NameSponge Microbes In A High Co2 World
TypeHost-Associated
TaxonomyHost-Associated → Porifera → Sponge → Unclassified → Unclassified → Marine → Sponge Microbes In A High Co2 World

Alternative Ecosystem Assignments
Environment Ontology (ENVO)Unclassified
Earth Microbiome Project Ontology (EMPO)Host-associated → Animal → Animal corpus

Location Information
LocationDavies Reef, Great Barrier Reef, Australia
CoordinatesLat. (o)-18.833Long. (o)147.683Alt. (m)N/ADepth (m)N/A
Location on Map
Zoom:    Powered by OpenStreetMap ©


Associated Families

FamilyCategoryNumber of Sequences3D Structure?
F007683Metagenome / Metatranscriptome346Y
F010384Metagenome / Metatranscriptome304Y
F015565Metagenome / Metatranscriptome253Y
F017963Metagenome / Metatranscriptome237Y
F020857Metagenome / Metatranscriptome221Y
F022150Metagenome / Metatranscriptome215Y
F023046Metagenome / Metatranscriptome211Y
F024258Metagenome / Metatranscriptome206Y
F035204Metagenome / Metatranscriptome172Y
F038110Metagenome / Metatranscriptome166Y
F041044Metagenome / Metatranscriptome160Y
F041611Metagenome / Metatranscriptome159Y
F043240Metagenome / Metatranscriptome156Y
F049434Metagenome / Metatranscriptome146Y
F069743Metagenome / Metatranscriptome123Y
F074458Metagenome / Metatranscriptome119Y
F076933Metagenome / Metatranscriptome117Y
F083784Metagenome112Y
F085218Metagenome111Y
F093358Metagenome / Metatranscriptome106N

Associated Scaffolds

ScaffoldTaxonomyLengthIMG/M Link
Ga0242739_104014Not Available558Open in IMG/M
Ga0242739_104169Not Available1484Open in IMG/M
Ga0242739_104730Not Available517Open in IMG/M
Ga0242739_105136Not Available603Open in IMG/M
Ga0242739_106511Not Available677Open in IMG/M
Ga0242739_108022Not Available588Open in IMG/M
Ga0242739_108099All Organisms → Viruses → Predicted Viral1403Open in IMG/M
Ga0242739_110752Not Available624Open in IMG/M
Ga0242739_110910Not Available682Open in IMG/M
Ga0242739_112566Not Available659Open in IMG/M
Ga0242739_117182All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Porifera → Demospongiae → Heteroscleromorpha → Haplosclerida → Niphatidae → Amphimedon → Amphimedon queenslandica992Open in IMG/M
Ga0242739_118806Not Available2088Open in IMG/M
Ga0242739_118928Not Available540Open in IMG/M
Ga0242739_120246Not Available974Open in IMG/M
Ga0242739_120436Not Available536Open in IMG/M
Ga0242739_121756Not Available675Open in IMG/M
Ga0242739_121822Not Available1882Open in IMG/M
Ga0242739_123325Not Available583Open in IMG/M
Ga0242739_123510Not Available657Open in IMG/M
Ga0242739_124262Not Available564Open in IMG/M
Ga0242739_125183Not Available532Open in IMG/M
Ga0242739_125634Not Available669Open in IMG/M
Ga0242739_128163Not Available942Open in IMG/M
Ga0242739_131584Not Available750Open in IMG/M
Ga0242739_132850Not Available552Open in IMG/M
Ga0242739_135682Not Available1297Open in IMG/M
Ga0242739_139727Not Available626Open in IMG/M
Ga0242739_141881Not Available674Open in IMG/M
Ga0242739_150719Not Available609Open in IMG/M
Ga0242739_153047Not Available592Open in IMG/M
Ga0242739_154299Not Available579Open in IMG/M
Ga0242739_154909Not Available1097Open in IMG/M
Ga0242739_155135Not Available748Open in IMG/M
Ga0242739_156265Not Available978Open in IMG/M
Ga0242739_162505Not Available556Open in IMG/M
Ga0242739_164666Not Available576Open in IMG/M
Ga0242739_164679Not Available591Open in IMG/M
Ga0242739_165605Not Available1600Open in IMG/M
Ga0242739_165746Not Available998Open in IMG/M
Ga0242739_171047All Organisms → Viruses → Predicted Viral1612Open in IMG/M
Ga0242739_173439Not Available551Open in IMG/M
Ga0242739_175340Not Available548Open in IMG/M
Ga0242739_176612Not Available891Open in IMG/M
Ga0242739_187539Not Available562Open in IMG/M
Ga0242739_187786Not Available593Open in IMG/M
Ga0242739_190269Not Available613Open in IMG/M
Ga0242739_190537Not Available577Open in IMG/M

Sequences

Scaffold IDProtein IDFamilySequence
Ga0242739_104014Ga0242739_1040141F010384MQPQLGIWKRFIRSFLVVDRFSLSWGSGRGLLEVYQGWTDAASAGHLEEVY
Ga0242739_104169Ga0242739_1041692F083784MYLSFHAGMDFNDTQPFEVTMAAGTTVVTADIPIVDDEINEAEEEFVVILEVFSDTTNPVEFTTNTSVCRIPASDRKCSTECLHGLN
Ga0242739_104730Ga0242739_1047301F015565MLLFCVKPIVKDSRNFELVCLKKKKKERKHFGRLATFWFGTFSTTRCVVGHEALKNEWYVVIK
Ga0242739_105136Ga0242739_1051361F038110GHMSKVDGPESLAISIRDVSYKLMNLKIILLLIYCLVDMPTSQARLSYLVMAERYRTVRVMVSEHR
Ga0242739_106511Ga0242739_1065111F010384RFIRSLLGVDRCSLSWGSGRGLLEVYQGWTDAASAGDLEEVY
Ga0242739_108022Ga0242739_1080221F017963GANSMATSGLVFRSDLVGTGKAISILFGINGFRNKRSHLVGSPFPEFKDRFSAMAGWHFSGDLARCLLIGGCGQSHISARCG
Ga0242739_108099Ga0242739_1080991F010384QLGIWKRFIRSLLGVDRCSLSWASGRGLLEVYWWWTDAASAGHLEVQ
Ga0242739_109520Ga0242739_1095201F076933MIYANCGAIPVITSTTYMTIVELFDEYSAPFSPEMIRSLVMTPTSILNGIILSMETERSAKACC
Ga0242739_110752Ga0242739_1107521F085218MLELKFAICYRAASLHSQASYAVLAEESLTRPGFLQTL
Ga0242739_110910Ga0242739_1109102F010384PQLGIRKRFIRSLLRVDRCSLSWASGRGLLEVCWGGTDAASTEHLEEVY
Ga0242739_112566Ga0242739_1125661F010384KRFIRSLSGVDRCSLSWGSGRGLLEVYWGWTDAASAGDLEEVY
Ga0242739_117182Ga0242739_1171821F010384EGGQMQPQLGIWKRFTRSLLGVDRCSLSWASGRSLLEVYWAWTDAASAGDQEEVD
Ga0242739_118806Ga0242739_1188061F017963VHPKGANSIATSRLVLRSDLVGTGRAISVLFGINGVRNKRSHLVEPPFLEFKAHFSATAGWHFLRDLTRCLLVGGCGHSHVSVKYG
Ga0242739_118928Ga0242739_1189282F010384MQPHLGILKRFIRSLLGVDRCSLSWESGRGLLEVYQGWTDAASAGHLEEVY
Ga0242739_120246Ga0242739_1202461F074458MHAPNAVTYCQVWFFEMAGISSAVFVLDDNLATELETCTKANVELLSRVAIIALASGDTFSESGLLHW
Ga0242739_120436Ga0242739_1204362F024258MHSLVNYACAIGTRLNLDLLCVAQDGIVLELRRIAASQNCHSCQFANKRAERGYYD
Ga0242739_121756Ga0242739_1217562F083784MQFSLPYSVYLYLPTGMDFNDTPFVVTMAAEITLVAANISVVDDEINEAEEVFFVVLEVVSNTTNPVEFTTNTTVCRIPASDRKCSTECLHGLN
Ga0242739_121822Ga0242739_1218221F024258MNCACAIGTRLNLDLLFVAQNGVVLQLRGTAASQNRHSCQFADKRAERGYNNQSHVILCM
Ga0242739_123325Ga0242739_1233251F023046PFPEFKARFSATAGWHFSRDLTRRLLIGGCGQSTYLLSMAEITSGSSLEPNKPREQKLGY
Ga0242739_123510Ga0242739_1235101F010384MQPQLGIWKRFIRSLSGVDRCSLSWASGRGLLEVYWGWTDAASAGDQEE
Ga0242739_124262Ga0242739_1242621F015565MLLFCAKTIVKESRKFELARLKKKKKEKHFGRLATFWFGTFAILFSATGCVVRHENTRR
Ga0242739_125183Ga0242739_1251831F083784FNDTQPFEVTMAAGINQSEVVTADIPILDDEINEAEEEFIIVLEVVSNTTNSVEFTTQTTVCRIPPSDRK
Ga0242739_125634Ga0242739_1256341F038110MAEVCSPVVSEDRGHTSKVDGPETLAISIRDVSYKLMNLKIILLLIHCLVDMPTSQVRLSYLVMSERYRIVRVMVSEDR
Ga0242739_128163Ga0242739_1281631F017963MAASGLVFRSDLVGTERAISILFGINGVRNQRSHLVGAPFPEFKACFSATAGWHFSRDLTRCLLIGGCGQ
Ga0242739_131584Ga0242739_1315841F010384MPPQLGIWKTLIRSLLRVDRCTLSWASGRGLLEVYWGWTDAASA
Ga0242739_132150Ga0242739_1321501F076933LFMIYANCGAIVVITSTTYMTIVELFDEYSAPFYPEVIRSSIMTLTSILNDIISSMETGRSTKACC
Ga0242739_132850Ga0242739_1328501F010384RKRFIRSLLRVDRCSLNWASGRGLLEVYWGWTDSASAGHLEEVY
Ga0242739_135682Ga0242739_1356821F017963VHPEGANSMATSGLVFRSDLVGTGKAISILVGINGFRNKRSHLVGPPFPEFEARLLATAGWHFLRDLTRHLLIGGCGLSHVSAKHG
Ga0242739_139727Ga0242739_1397271F074458MAGIPSAVFVIDDDLATELETYAKANIELLSRVVNVALASGDTFSESGLLHW
Ga0242739_141881Ga0242739_1418812F022150VRNERSRLVGPPFLEFKARFSAKAGWHFSRDLTRRLLIGGCGQSHVSAKHG
Ga0242739_150719Ga0242739_1507191F020857MKMSFTLAVAPPFVHPMTSLPAMPTHSVWKYGFLSEPTRRRQVAKYGNLKRCESLSFSG
Ga0242739_150990Ga0242739_1509901F041611LFMSLFFSSRCMLELKFAIYYRAVSLPSQASYAVLAEESQAFFKHSLHTKSISNSAILRNDYISLLSDLCACVHIKKMASQGSHSSSERFESPCVTSNLEKAMGWCTAQ
Ga0242739_152456Ga0242739_1524561F049434MKTLEDEQYVVIKAYKFAVFEIWRDFNVLSYIACPRYPYIRVYRLYDIETRVNLAQILPS
Ga0242739_153047Ga0242739_1530471F043240GGMTPWMASTASAGALKSGESETTPPIIARLRNVTCPPP
Ga0242739_154299Ga0242739_1542991F015565VLVHCSGENAAVCAKAIVKESRKFELAHLKKKKEKHCCLATFWFGTFAMLFSAIGCVVHHENTQR
Ga0242739_154909Ga0242739_1549092F010384MQPQLGIWKRLIRSLLGVDRCSLSWGSGRGLLEIYQGWTDAASAGDLEEVY
Ga0242739_155135Ga0242739_1551352F022150VGPPFPEFKARFSATAGWHFSRDLTRRLLIGGCSQSHVSAKHG
Ga0242739_156265Ga0242739_1562651F035204MPPCKPVFQVIESRRDGENLEKLSMETTVLNVHYVMHILGFHMTFNET
Ga0242739_162505Ga0242739_1625051F007683MMSLLAMSLGLRFCVSRKGRTGGSGWVHPKGANSMAASGLVFRSDLVGTGRAISILFGINGVRNQRSHLVG
Ga0242739_164666Ga0242739_1646661F010384MQPQLGIRKRFIRSLLRVDRCSLNRASGRGLLEVYWGWTDAASAGHLEEVY
Ga0242739_164679Ga0242739_1646791F093358RDVSYKLMNLKIILLLIHCLVDMPTSQARLSYRVMSERYHIVRVMVSEDRGATLLPISNQ
Ga0242739_165605Ga0242739_1656051F041044MALPVPTRSLLNTIPDAAMLFAPFGWTHPPSPVPPFLLTQNLSPKDIAGSDIMKLKVSGRIYPLWALKS
Ga0242739_165746Ga0242739_1657461F024258GTSLNLDLLCVAQNGVVLELRRTAVSQNCHSCQFADKWAERGYYDESDVVLCVN
Ga0242739_171047Ga0242739_1710472F010384MHPQLGIWKRFIRNLLGVDRCSLSWASGRGLLEVNWGWTDAASAGDLEEVY
Ga0242739_173439Ga0242739_1734391F024258TRLNLDLLCVTQNGIMLELRRIAASQNCHSCQFANKRAERGYYDESDIVLCVK
Ga0242739_175048Ga0242739_1750482F049434MKTLEDEQYVVIKAYKFTVFEIWRDFNVLPYIACPRYPYIRV
Ga0242739_175340Ga0242739_1753401F010384WTDAASLGIWKRFIRSLLGLERCSLSWAFGRGLLEVYWGWTDAASAGHLEKVD
Ga0242739_176612Ga0242739_1766121F069743MYTLHTHSHAQLTHLHTYMQSHTIHLSIAPGDYGALTGFSLGPFSNSVRQLSFSMPIVNDMIPEGTETFIANLTLLPADQARLRNRVTVQPDSATVTILDVQGKILAV
Ga0242739_187539Ga0242739_1875391F010384MQPQLGIWKRFVRSLLGLDRCSLSWASGRGLLEVYWGWTDAASA
Ga0242739_187786Ga0242739_1877861F017963VGGKQHGRVWLVLKSDLVGTGRAISVLFGINGVRNKWSHLVGPPFPAFKACFSATAGWHFLRDLTRRLLIDGCGQSHVHISVKNG
Ga0242739_190269Ga0242739_1902691F024258MRLHVNYACAIGTRLNLDLLFVAQNGVVLELHRIAASQNCHSCQFANKRAERGCYDESDIVL
Ga0242739_190269Ga0242739_1902692F076933MIHANCGAIAVITSTTYKTIVELCGEYSAPFSPEVIRSLIMTPISILNDIILSMETERSA
Ga0242739_190537Ga0242739_1905372F024258MRLHVNYACAIGTHLNLDLLCVAQNGVVLELRRIAASQNCRSCQFANKQAERGYYDESDIVLCMK

 ⦗Top⦘



© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.