Sample 3300024530

3300024530: Metatranscriptome of freshwater microbial communities from St. Lawrence River, New York, United States - Law_Miss_RepB_8d (Metagenome Metatranscriptome)

Overview

Basic Information
IMG/M Taxon OID	3300024530 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0133460 \| Gp0294611 \| Ga0256322
Sample Name	Metatranscriptome of freshwater microbial communities from St. Lawrence River, New York, United States - Law_Miss_RepB_8d (Metagenome Metatranscriptome)
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	147953134
Sequencing Scaffolds	61
Novel Protein Genes	72
Associated Families	55

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	41
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Demerecviridae	1
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3
All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium LSUCC0115	1
All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	1
All Organisms → cellular organisms → Eukaryota	3
All Organisms → cellular organisms → Eukaryota → Cryptophyceae	4
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	1
All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Lacunisphaera → Lacunisphaera limnophila	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Enterobacter → Enterobacter cloacae complex → Enterobacter hormaechei	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1
All Organisms → cellular organisms → Bacteria	1
All Organisms → cellular organisms → Eukaryota → Sar	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Freshwater Microbial Communities Amended With Dissolved Organic Matter (Dom) From Various Rivers In The United States
Type	Environmental
Taxonomy	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater → Freshwater Microbial Communities Amended With Dissolved Organic Matter (Dom) From Various Rivers In The United States

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	freshwater river biome → river → river water
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline)

Location Information
Location	USA: New York
Coordinates	Lat. (^o)	45.0061	Long. (^o)	-74.7949	Alt. (m)	N/A	Depth (m)	5
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F000191	Metagenome / Metatranscriptome	1666	Y
F003666	Metagenome / Metatranscriptome	474	Y
F004323	Metagenome / Metatranscriptome	443	Y
F004727	Metagenome / Metatranscriptome	426	Y
F007472	Metagenome / Metatranscriptome	350	N
F010249	Metagenome / Metatranscriptome	306	Y
F015601	Metagenome / Metatranscriptome	253	Y
F016245	Metagenome / Metatranscriptome	248	N
F016926	Metagenome / Metatranscriptome	243	Y
F017444	Metagenome / Metatranscriptome	240	Y
F018910	Metagenome / Metatranscriptome	232	Y
F023532	Metagenome / Metatranscriptome	209	N
F023855	Metagenome / Metatranscriptome	208	Y
F025748	Metagenome / Metatranscriptome	200	Y
F026478	Metagenome / Metatranscriptome	197	Y
F028495	Metagenome / Metatranscriptome	191	N
F029333	Metagenome / Metatranscriptome	188	Y
F032540	Metagenome / Metatranscriptome	179	N
F033041	Metagenome / Metatranscriptome	178	Y
F036098	Metagenome / Metatranscriptome	170	N
F039170	Metagenome / Metatranscriptome	164	Y
F041009	Metagenome / Metatranscriptome	160	Y
F042749	Metagenome / Metatranscriptome	157	N
F044315	Metagenome / Metatranscriptome	154	N
F044442	Metagenome / Metatranscriptome	154	Y
F045549	Metagenome / Metatranscriptome	152	N
F046188	Metagenome / Metatranscriptome	151	N
F047509	Metagenome / Metatranscriptome	149	N
F048103	Metagenome / Metatranscriptome	148	Y
F049019	Metagenome / Metatranscriptome	147	N
F050883	Metagenome / Metatranscriptome	144	Y
F056317	Metagenome / Metatranscriptome	137	N
F064751	Metagenome / Metatranscriptome	128	Y
F065491	Metagenome / Metatranscriptome	127	N
F067419	Metagenome / Metatranscriptome	125	N
F071251	Metagenome / Metatranscriptome	122	Y
F071977	Metagenome / Metatranscriptome	121	Y
F072011	Metagenome / Metatranscriptome	121	N
F073097	Metagenome / Metatranscriptome	120	N
F076857	Metagenome / Metatranscriptome	117	N
F078267	Metagenome / Metatranscriptome	116	N
F079612	Metagenome / Metatranscriptome	115	N
F079635	Metagenome / Metatranscriptome	115	N
F079656	Metagenome / Metatranscriptome	115	N
F081256	Metagenome / Metatranscriptome	114	N
F082151	Metagenome / Metatranscriptome	113	Y
F082152	Metagenome / Metatranscriptome	113	Y
F082153	Metagenome / Metatranscriptome	113	Y
F082737	Metagenome / Metatranscriptome	113	Y
F086577	Metagenome / Metatranscriptome	110	Y
F088788	Metagenome / Metatranscriptome	109	N
F097215	Metagenome / Metatranscriptome	104	N
F097454	Metatranscriptome	104	Y
F100737	Metagenome / Metatranscriptome	102	Y
F102620	Metagenome / Metatranscriptome	101	Y

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
Ga0256322_1002494	Not Available	3519	Open in IMG/M
Ga0256322_1004692	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Demerecviridae	2656	Open in IMG/M
Ga0256322_1006873	Not Available	2231	Open in IMG/M
Ga0256322_1008842	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1975	Open in IMG/M
Ga0256322_1009317	Not Available	1930	Open in IMG/M
Ga0256322_1009387	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium LSUCC0115	1923	Open in IMG/M
Ga0256322_1018551	Not Available	1366	Open in IMG/M
Ga0256322_1019621	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1323	Open in IMG/M
Ga0256322_1022367	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	1231	Open in IMG/M
Ga0256322_1023115	Not Available	1209	Open in IMG/M
Ga0256322_1030821	Not Available	1024	Open in IMG/M
Ga0256322_1033803	All Organisms → cellular organisms → Eukaryota	971	Open in IMG/M
Ga0256322_1035033	Not Available	950	Open in IMG/M
Ga0256322_1035066	All Organisms → cellular organisms → Eukaryota	950	Open in IMG/M
Ga0256322_1035129	Not Available	949	Open in IMG/M
Ga0256322_1035595	Not Available	941	Open in IMG/M
Ga0256322_1037149	All Organisms → cellular organisms → Eukaryota	917	Open in IMG/M
Ga0256322_1037345	Not Available	914	Open in IMG/M
Ga0256322_1041129	Not Available	862	Open in IMG/M
Ga0256322_1041990	All Organisms → cellular organisms → Eukaryota → Cryptophyceae	851	Open in IMG/M
Ga0256322_1042737	Not Available	842	Open in IMG/M
Ga0256322_1042936	Not Available	840	Open in IMG/M
Ga0256322_1043508	Not Available	833	Open in IMG/M
Ga0256322_1044412	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	822	Open in IMG/M
Ga0256322_1044420	Not Available	822	Open in IMG/M
Ga0256322_1045689	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Lacunisphaera → Lacunisphaera limnophila	808	Open in IMG/M
Ga0256322_1048468	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Enterobacter → Enterobacter cloacae complex → Enterobacter hormaechei	779	Open in IMG/M
Ga0256322_1049009	All Organisms → cellular organisms → Eukaryota → Cryptophyceae	773	Open in IMG/M
Ga0256322_1049072	Not Available	773	Open in IMG/M
Ga0256322_1049799	Not Available	765	Open in IMG/M
Ga0256322_1050522	Not Available	758	Open in IMG/M
Ga0256322_1052776	Not Available	737	Open in IMG/M
Ga0256322_1055026	All Organisms → cellular organisms → Eukaryota → Cryptophyceae	718	Open in IMG/M
Ga0256322_1056060	Not Available	710	Open in IMG/M
Ga0256322_1057764	Not Available	696	Open in IMG/M
Ga0256322_1057777	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	696	Open in IMG/M
Ga0256322_1057923	Not Available	695	Open in IMG/M
Ga0256322_1059908	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	680	Open in IMG/M
Ga0256322_1063564	All Organisms → cellular organisms → Eukaryota → Cryptophyceae	654	Open in IMG/M
Ga0256322_1063635	Not Available	654	Open in IMG/M
Ga0256322_1064482	Not Available	648	Open in IMG/M
Ga0256322_1064905	Not Available	646	Open in IMG/M
Ga0256322_1072803	Not Available	599	Open in IMG/M
Ga0256322_1073577	Not Available	595	Open in IMG/M
Ga0256322_1073933	Not Available	594	Open in IMG/M
Ga0256322_1074470	Not Available	591	Open in IMG/M
Ga0256322_1075621	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	585	Open in IMG/M
Ga0256322_1076948	Not Available	579	Open in IMG/M
Ga0256322_1078779	Not Available	570	Open in IMG/M
Ga0256322_1079734	Not Available	566	Open in IMG/M
Ga0256322_1081323	Not Available	559	Open in IMG/M
Ga0256322_1086027	Not Available	539	Open in IMG/M
Ga0256322_1087389	Not Available	534	Open in IMG/M
Ga0256322_1089748	Not Available	525	Open in IMG/M
Ga0256322_1089763	Not Available	525	Open in IMG/M
Ga0256322_1089803	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
Ga0256322_1090583	Not Available	522	Open in IMG/M
Ga0256322_1090837	Not Available	522	Open in IMG/M
Ga0256322_1091467	Not Available	519	Open in IMG/M
Ga0256322_1092090	Not Available	517	Open in IMG/M
Ga0256322_1094650	All Organisms → cellular organisms → Eukaryota → Sar	509	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0256322_1002494	Ga0256322_10024942	F045549	MASPSEEINPLEQLRALRTEVIDRERTRVRGLLDEVSTSEQETSGETTTAEPSVPTAEDSEAVSERKPRKGKAVRRPASLEGEELKIRLGTELRRLVAQQCHTDGWSVNDLVSSVLRSALSARSPSIWHGGTALATANVCRFWHRHPMDTALRLTSDKGVFLITTNPASPLFKHWKEHYTLLGMPDCDRMARQMRLIQLQEWVQSVDDFDVDDWRKPLSEEDYMVTRAVVSQQDAPTDAASRDDETSPSSSSP
Ga0256322_1004050	Ga0256322_10040502	F000191	SGYTVGNLVNQHVRFIESGEKDPLMTYEKALITQSRALEIPELD
Ga0256322_1004692	Ga0256322_10046925	F004727	MKVTITYHDNESFTMEEVVKQAVHNYGKAAKVEVMPESTMAYDYIYFGLQQLLTHEQLSLLYDSGATYQQDIKKLRDQVMYKITEIVDQVIIDNESKVG
Ga0256322_1005006	Ga0256322_10050062	F000191	SGYTVGNLVNQHVRFIETGEKDPLMTHEKALITQSRGQEIPGLD
Ga0256322_1005294	Ga0256322_10052942	F000191	VNQHVRFIETGEKDPLMTYEKALITQSRTGEIPPID
Ga0256322_1006117	Ga0256322_10061171	F000191	GYTVGNLVNQHVRFIESGEKDPLMTYEKALITQSRDREIPELD
Ga0256322_1006873	Ga0256322_10068734	F067419	MNEYVSPMDTYYQDGVARPFIQIGENVWVADNSGVKRVRIYKWLAPSVYLVKVTAVRVGYEKKIPIGTELCGVLVRFKDFGYYAYNQVCLFKTHHLLKNYMGGDPMFTHIYNGTVAIKNDLEQYQTIINACCLQVGDFVRINLETYAQIEKVVLFKKGLEGSEFEVKLTSGNRFFYETGFKKGQLVKGILKRKLFA
Ga0256322_1007367	Ga0256322_10073671	F000191	GYTVGNLVNQHVRFIETGEKDPLMTYEKAFFTQSRPGEIPLID
Ga0256322_1008842	Ga0256322_10088422	F076857	MSEIREKLSELEKGLESLNAAPVGREIATEQFDAADALVTQRELRKKFAKMNTAEISEMLDIQASRETGKQASNDVLNRLAVANPNIAKLLDSSGGTALIRQDLEPMLYSLFVKRFPFFERIRKEPANGLVHAFNQQTAYGDAVFQTETGTVTDDSATYSRQTTNVAVLATRRGITLKNQFALGQGGSPFNGLSTELAGGVTAIAGKLQKTLFQGNADTTASAGTATELGAYDANGFTGLRKLLGSGSSAEIVTKATSESYLSNINEVVAGILDNGGNPSAILLSPTDYANFVNELTSLVRFNAPSQQGQVAGATFASVATANGVLPLLAVPGDSIGSYTLSSVNYRDMYVVDEDTWSMPYLGTDSITTLEIPIGVNGALTRLYIMYVMFGLGAKAPQFNGKIRV
Ga0256322_1009317	Ga0256322_10093172	F079612	MWGQPIPSLTKPTRFLMDWLIRLVLAFQLTVLSTLADPLGDEVAGLKLNLRQFRPLSSNELRLVVDLAHSAGLKRVATIAAADGQGPESHGSLVVGSDEVVSGRRISQYTVEVRVEPFAPRGDRVGKFSIDSREKPFEIHHATFTIRGKPMRVSCDSDLDLVAADLAFSALEAGRITYSTDQAKTNAAAIDFATPLSVTNKEGKVSIIFKTSDRWCWDFIDGRLKKDQLVIEQASRGCS
Ga0256322_1009387	Ga0256322_10093872	F102620	MKLYDLVKDRVKDPQGVISDNEMVVLNRRDFLYSETSTAGAFLKLFNADRVTYEMYSIIDYIHSSVCKIRAPTEVNVYQLSQSMTLPSLAVSAFVGNMSSRVRVHAPRGIQAIQSRDQFGKDVAERFKQQLECGLAMGDLGSHDNAVEILLCNASNEAEVSSGLKAFERARRGFILIKGYGRAKAPNCGEIILSARLNVHCTLAGFGVCSAL
Ga0256322_1009474	Ga0256322_10094741	F000191	GNLVNQHVRFIEPGEKCPLMTYEKAFITQSQGQEIPGLD
Ga0256322_1013829	Ga0256322_10138292	F000191	GYTVGNLVNQHVRFIETGEKDPLMTYEKALITQSRAGEIPPID
Ga0256322_1018551	Ga0256322_10185514	F081256	VLFLVVLLSSGLRGELEFSAFVVLQKSELFVLRDLEQDQTSGFLNLGQSFHGYTLKSFDKNREVVTVQKDGRDLEIRLKVSKIKDGKITVAGMVSALNGQNAEGVRVSLFIGEESVIPLSESLRLSITPTRTAEGHMKYAAKFITITEGKEKVVLCPAVVALPGSPFAVKVGAYGYQFAPQP
Ga0256322_1019621	Ga0256322_10196211	F049019	MRTSRKLTHVLFAVFTLAIMSMAALAADPGTSLPATSQASDQKQGSLLIYSHYGSVTSNVSANDTRINITNTHVTSSVVVHFFFVSQGCNVADFKTELTQSQTYSFLVSDFDPDTVGYIMAVAEAEDGLPIAMNFLIGDLFVKSSTGPFSANLGAIAFAAQWDGTNNGNNPNESGFWRIPGGDAATPSVNITFGSAGNYNALPRTLAVDNIPSFAGGDRALLILLTPVQSFVTGGGSVGTLFGLLFDDAEQSQSFQINGGACQSTNIISDSYPRTAPRFTTVVPAGRTGWMKVYKTSDLGILGSVIVYNIGGRDVNFHGGHNLHHLTLAGSQT
Ga0256322_1020337	Ga0256322_10203371	F000191	VGNLVNQHVRFIETGEKDPLMTYEKALITQSRVLEIPELD
Ga0256322_1022367	Ga0256322_10223671	F097454	MLSKMKVQRLPRASRVLVARSLFRGAVATQSLVMPVETSSTTRIFRRHFGAGHIKTVSLSAAESVVPPFPTAIIYNQSKHASGSVLADIRAVWGNKIRVLQTVETGLHPLPGVDGAIFIPPKTWGDMKTFGKALDSSCALDHGLKRHRNEKRVVFMAGWSAFAESHEAAVAVTKLGLVWPGTEPKASARLEKIGFKNICRQVGAPTPNFVVLSEEGDQKNLNDPVVKEAVIQQYMAAVAAMKSHEKGLIKSIHGGGGKGTAHLDNPQDPEQVRAAIQKVFNEMGRSDGIYFEEKVNTKGDGRFFQLEIEVDGSTVAHGGRFVWFNSRLQKVVEIGLSDAHIPRFMPQDLYQKARAWSSEIARVAGNNTR
Ga0256322_1023115	Ga0256322_10231151	F079635	AGTDPYYIDTDPEEAEGVVRPGYVRVMCWQNSACLQIREDVINQSQLMNFLASARPAENLSECIHLQNQLASADNVRLICDWLAKHIEFQSRDAPAEERRAFDQRFFLLNPAGHAAYDSAPNDQAKSDILDSRKDWLRWREDNEENEDPKRLSVDPSNKRTPKFQRTGPVEARLHRTYEEIQHVMFVANFLELHPTDWHVEFAKKEAERIAAQPPGPFQEYGLDPADKFAETVMELCCHHLGDMILGCESPVDMQHRFPTLIGAKALTAKDRYDIVTADLWIHGDDFVEKVVPELQAQQRAEFAKAKAEGMSDPDIEAKFGKPIPDWTLESTQDERAFMKEVPGQEANPTLRVPAIKINDQQPADEGFEIGHHWWG
Ga0256322_1030821	Ga0256322_10308212	F065491	VQLLSFGSYLTEPDGDSLVVEVDSILIDHGTSGFVAASMATALSAWGPYLVGPSTLNVLWRPDSSGLYAAGWRIKEFRNGQVIGIQRVQHHFRVVKSFATSLIDLGRDEISTWDPESHGDYYNLNGQLIFSGVWGKDRRYDGVLLIRQGSRFWKKAWLP
Ga0256322_1033803	Ga0256322_10338032	F007472	LVQLGKMVYFTYKKLNICTVALLASVFAILIAAMAVDWYSYKVEFSYTRVASSDTSLASTLYNYTQTNFDMFGQTVNVQTANNNKIVRTTQQTYAQLGATNVNQQFKIQQAFVLIALLTAGLLFVAHTLYFFDGFRNKILFFVGITALRTILIIALLIVVSAEIIAFLAFLGLSDKIASDSPNCLTGPCQKFSDTVTTQLGVNALTIGNEASVLATLQSVATWGPTAGWYLVLATIPLTVLATIIVVINRFPIPVDSLGTGEAL
Ga0256322_1035033	Ga0256322_10350331	F072011	MQVAYTSKNGRQLPESMGYGFIDKQSIVETDSTLEANYISEISNSLAHKVTWSLTSCKIETFNSNGTRGRITVNQSLEKALLFDAITWDLGKDPLYLEASNAITSLGNILVMYPGKTELNYYPAGKLMLFILPVKKLDDAYLSFKQGLIDNKLAGLFMEQKGHYIAFTKELTIQNLFLVSFIVSMAQIHTAAKYFAAAGIIGPDKPDRLIIDDSDSMRTKHMRVFTTNEGDGYYALLFKELT
Ga0256322_1035066	Ga0256322_10350661	F007472	LAVGIQLGKMVYFTYKKLNICTVALLATVFAVLIAAMAVDWYSYKIEFSYTRVAASDTSLASTLYNYTQTTFDMFGQTVNVQVANTKIVRTSQQTYAQLGASGVNEQFKIQQAFVLIALLTAGLLFVAHTLYFFDGFRNKILFFIGITALRTILIIALLVVVVAETIAFLAFLGISDKIAKDSPNCLNGPCQKFADTVTTQLGQSDLSISGGNVAVSLQQVATWGPTAGWYLVLATIPLTVLATIIVVINRFPIPVDSLGTGEAL
Ga0256322_1035129	Ga0256322_10351293	F025748	MEVFALLGEWDYEGSILLGVYASEEEARTAHGVYTRDGDQFIQHYYVVRQVVGAPVDSDAHRVYIG
Ga0256322_1035595	Ga0256322_10355951	F056317	KSLAIPVRMELLSGFRQQQSQPPPSAAVAAPKTPSPPAESSALTADSELEIISRLPQGKQLDILTRSPAFLQLAEILQGPKYERLRADFPKKEIRAAWFRDLPSDQRLALERLYACVAEKRMIREGDEMSVNYLFKTLFSDAVLEKYEEFIRAAFTRGEGLSAITYRKSYFSLVSLITSLAGRHNSNVEPRHLASVMQARRRLLDHADSWNKETTLASNLSESDKILRTMTSTPPERVLTMLYFLLETQKLWFELNFSKRTVQEHESQRALGFTQFALLMARPVSRAETLVNLTLATVQKQLREPGTLCWTFE
Ga0256322_1037149	Ga0256322_10371491	F007472	QIGKMVYFTYKKLNICTVALLATVFAVLIAAMSVNWYQYKVEFSYTRVTASDSSLASSLYNYTETTFDMYGQTVNTQGANTKIVRTVQQTYAQLGASNVNEQFKIQQAFVLIALLTAGLLFVAHTLYFFDGFRNKILFFVGITALRTILVIALLVVVASEIIAFLAFLGLSDKIASDSPNCLSGPCQKFADSVTTQLGQSTLAIGSESAAAVSLQQVANWGPTAGWYLVLATIPLTVLATIIVVINRFPIPVDSLGTGEAL
Ga0256322_1037345	Ga0256322_10373451	F015601	MAGYSREFLIDAFMSRYIKCALISIESLVNLEQMANDLYDRVGRDKFRSYASLDAEALRVYKNQC
Ga0256322_1041129	Ga0256322_10411291	F044315	VMPHQQIDVAGLDGSESFRVRGASRSRSLLLVGSMLALAVCGVLMYVGMGSSQPVDLLQRSCPNCLAKISAKINALSSDQKHMAQQFESELNRLQRSVALLKSEVAHVNPRSGLVVIKKALSAAAPANHDSEFDESGFKKGANRARNMRDKKYGAFANRAIDKDTVEAFADHIYGPNPTTLDRKGVEREGYFTMAKIHSGNFYYINLEGVSNHHIKLIMQGTDGYNREFEGYGSIYTGPLYDGDHGVRDYFEVQDLVSGDVEFFRFSHPWTPPVMK
Ga0256322_1041990	Ga0256322_10419901	F042749	MKVIALPCLLLVAMVAVMYFEPSEPSIHHKGEVALQESAQHVQSLALFKHAAIEDVYVYAGKEEHTRHLVPFICRLIKRHRFRLNIHQFFSVDDAPLRSVLWSHDSRVVIFPPFESYPQISSKGFTDLRAYVAAGNNIVFMGSYIALQVMNDAFGFSLRDDYKEGPYYRNDRNVRGTEFEYLPSRLNEPSPRVYGAMAKSLPPGAFSLYDSLGSVVVFYVRYDLGTIVYIGYQFDNPYQIDSWVRVIHAAMAM
Ga0256322_1042737	Ga0256322_10427372	F003666	FPRRVRIHGGEFGESARAIHRIESEKSGSSRDREILELD
Ga0256322_1042936	Ga0256322_10429362	F028495	TSEGENTMSVQMNETESVVGFPALESNYAVLINNAIGEHRNSDVNFIVRSYNMEKNNITRKSVIERLRDAF
Ga0256322_1043508	Ga0256322_10435082	F073097	MKKGESMYKLKVPVADSKAMGVEPIWSEDYEPANYQSEYGNALNWYNFIVDQKDCRAFLVDWFKGDATKLKALSQLSDKMLPRTYANSARIAMRGFPLTDEHKARIWEKVEERISKKTVLIEDDTAAPEPVAKVIKKPLVATTFIVSDVDDEIEKLINGEDTRTVSQILIPYRLTDKNYLDCVEKIEPILAEFAELVEVRRLPK
Ga0256322_1044412	Ga0256322_10444121	F079656	KVTRKDYVDYHRMAQTDVPTAFSYDASLTGIDTTGNANNAVYYLNGNVVLYADSVSSNPAGDNYLFTVKGANFQNLLTAIGGTTSVEAQLWLENNSLNLSSVTHNYTVVDDNTITFTIGYSDIDALTDCTSGVVRPTLALGTATGGFHMTGLHFFLDIVEP
Ga0256322_1044420	Ga0256322_10444201	F044315	MLALVVCGLVMFVNNGSARAQPLDLLQQTCPGCLAKISKKINALSADQRHMAQQFESELTQLQQSVSKLKAEITHVNPRSGLVRVIKSDVLKSASPAGASEAAIAVSTQSTHDPEFDESGFKKGADRARNMRDKKYGAFPNRWVDKDTVEAFADHIYGPNPTTLDRKGVEREGYFTMAKIHSGMFYYINLEGVSNHHIKLIMQGTDGYNREYEGYGSIYTGPIYDGDHGVRDYFEVQDLVSGDVEFFRFSHPWTP
Ga0256322_1045689	Ga0256322_10456892	F004323	MPLNGLRRLEGRATPAVANHSPVTRDYPSRALSGVFQAAALR
Ga0256322_1048468	Ga0256322_10484681	F004323	MPLAGLRRLEGRTTPAVAAHSPVTRDYPSRALSDVFQAAALRLFTHE
Ga0256322_1049009	Ga0256322_10490092	F032540	RFGVVKRGSRAPIPSVVAGNMARGSVAVVPELGLATGADQLGGRSLRKRVVVAVVMLALGCVAVALAVASASGDAELRDTSVLKVGVSDRLDVWRQYENDEDINPRKKTGPKADWEKQRSIPDFVDGIIGPSPTAMDEGGGKSRGSFNVQKITDKTDFYYLRVSDRSGNGDRIRAELVGSDGYRLDWVGFGEIFTGPIHEGNLGETDYLRVEDLITGEEQFFRFRF
Ga0256322_1049072	Ga0256322_10490721	F048103	VGRPIEVGTPIGITRRDTAKHEVIRFHYCVFQYKRVLKTERYVRVRVVPLLTLINFYQGVDLEVILKYGNGDISRSS
Ga0256322_1049275	Ga0256322_10492751	F000191	GYTVGNLVNQHVRFIETGEKDPLMTYEKALITQSRALEIPDLD
Ga0256322_1049799	Ga0256322_10497991	F086577	EDWKIIGDVRVLSFSISVLMETAGAGNRKFSGSVQGSIGIGRFTFGAYVPFNKPGSQMEFTLPEVTVNGVNVNELFGIGTQVSVSPADIEKLLESEGGDVKARVKAELAQKAAELKALAKEQLRANLLAPIEELEARVEQMRQLAQNGSVLLLGNVVDSLRISGFDSKVLNPGVAGLPNFGRFGLTDLQIEFAAPANGSSYSRLKTLGATVIATEDWKIIGDVRVLSFSISVLMETAGAGNRKFSGSVQGSIGIG
Ga0256322_1050522	Ga0256322_10505221	F046188	MGDTPPMAFETIATEEILYEVRTWSLIGNAYAATSVLFVSDFKI
Ga0256322_1052776	Ga0256322_10527762	F064751	VSPVSVMVIATVPDAAPPVVRTIVVFAEVTLPEVAVNDVTPLAMEVTDPKK
Ga0256322_1055026	Ga0256322_10550261	F032540	GNMARGSVAIVPELGLATGADQLGGRSLRKRIVVAVVMLAFGCAAIALAAASASGDSKLRDTSVLKVGVSDRLDVWRQYQNDEDINPRKKKTEKADWEKQRSIPDFVDGIIGPSPTAMDEGGSKSRGSFNVKKITDKTDFYYLRISDRSGNGDRIRAELVGSDGYRLDWVGFGEIFTGPIHEGNLGETDYLRVEDLITGEEQFFRFRF
Ga0256322_1056060	Ga0256322_10560601	F071977	GLDKALGTDIFSKGQQFVHQHVGGGITSFVNQAVDGFSGVMNGAMKAVNDRIQSVLDPNRAQREYMNSQEYKDKMAAKQIFETFSKKLELPSNMPKYLSDSIVQWIMGEMKVTPLGKQPFLTNLNSENQCVPESTPNTCTSGDIKCIVLANKCFLDDEECVRAALKKVPIAALEQYAATHHLDFPGSSYGRYIRFSAPLCKKRAHSLGQHIGSKRSLLSQSDEADSQSDTTDSEES
Ga0256322_1057764	Ga0256322_10577641	F082152	KPDGYVSVIVLLVASAPPAVVVNENVAAADALPATRSPVAIVNEGSVG
Ga0256322_1057777	Ga0256322_10577772	F033041	MEKIKINTNFKFTFDSDVELRRAQSSGYIESYDMVRICVKRLDNGNQVDFPIKTREDYFETVASLNERSNEYDMVEIYQDTHMYDIQDYI
Ga0256322_1057923	Ga0256322_10579231	F016926	HENGFSNYWVLPAGTVWQCKGDPNGPYGLVAGAREFANCVRGVQDWSDLWSKLNSNSHSMDFDDWRTICDCWGDTWDDPTFSSPDKRHFADCFLDAVGGCGDGSAAGRQRLENQERAFLGIVLRTMGQADATNPTVLTTRTTLLINLLATPAPVDVPGKSCRYTEPSCVTFSPTIAVTPAPVQPMCPCETYAISCTNTPCPTNSCGDAGVASRTCVCQKSSGGRVVGQADC
Ga0256322_1059908	Ga0256322_10599082	F017444	FLLLFLKPHQSLDEKVRELSHQAIDEVLKTIGEIYEQEY
Ga0256322_1060289	Ga0256322_10602891	F082151	QIAVFDPFGTNVALNKPCDAINLFVTDKLIPYLPAGPENVYPLEQTMCERAVDGNLVNRNGNEIFQSNDPDSDSVTFYLGKDVFIKRIMYWNRKDCCQSMMAGATLDIISADGNVVNSEVLNDKLVQSFDFPSSQSRATLFTECNYHGEQVAIGPGNYKFALLQIPKSSLSAIKLPNDLEIKLFEGESFDGKSTPWIQADVPCLDWFQFNDRTGSVQVRERSKFN
Ga0256322_1063564	Ga0256322_10635641	F026478	LSFVMARSVLLIAVVLSLLLVAQCSKPKRKAVALDDEEVVQAKDFALKEIIKLSDSYRDMKIVKLISAEKARSAFSDGTNFFLKMELSCVSKCEAPLSPASTCRRGKYKGTNEIIVFWKDDGHYDGIAIDEFPQMDGEFHPCTPSYKGSEKCNPAEHRTPEQAALFMDDPEDDSVPRKED
Ga0256322_1063635	Ga0256322_10636351	F097215	LKSDEKGRYALGRFLPRRPDVRVEKNSDGSVTLHPVKRRMSRAEVEAFVSSRAGTWDGPVSGGKLLKLTRGA
Ga0256322_1064482	Ga0256322_10644821	F010249	NIQNEAKQIVEQLADRQISGMKAKYNEFQNWMSIENNPVVSERYNGDQVVNEYDSAHKYVYMTMFKRYNHALQQYELPVSYPSDYKGQREMSYSKDLLYVVYELQLQLRSGWEARYREDFIAQNMAKLNRALAKHIDDNMSASDIKVNIGGDGAEVIAIVDGKVFRTFGTLCGGYVQCLHYRYRSSLK
Ga0256322_1064905	Ga0256322_10649051	F010249	MKALENIQNEAKVIVEQLAERQINSMKERYNQFQEWMKVDGNAIVNDFHNRIDMYQSAHKYIYMTQYKNWNRELNQYELPTVYPSDYRGQSGMNYNKDLVFQVYELRLQISERWENNYREDFIGQNMVKLNRALAKHLNNEMTARDIRVKVGGDGAEVLADVD
Ga0256322_1072803	Ga0256322_10728031	F041009	QSAIIMESPEEAGRSRIPDFEASGIYIQPTFDMAFDFYLPRVGQFQQISALQFQCERAKSTAKDFWMPWFEFIFTSGDKFAQGEKSTNRLAVTKSLPLSSEEYMIRIELSSNKDKGYTITAIKTNKKLYNFKCGATSIALDVPPRSKDLIIGFAGNVQSGADGTYFTNLQALHLKLNAFADEVAEVQVNQ
Ga0256322_1073577	Ga0256322_10735772	F018910	KNLITEEFKEKFKLAFTRFMNIIIVSSTLIAGFGMGYYFQELKMKPKAVNETILNKEVRIAIDSEDKLIMMDRKTGGYTIYSDSIGRIIFKMYATKIASPVVIK
Ga0256322_1073933	Ga0256322_10739331	F078267	AGLDEKGNTLQSEYDRSKTLEREYVQKLIAFHETQAQVASEMSAFASSFDASFNELLTTRESAYNQMLNEAIELKLGRLYEVEKRSLAIFQDLLVEGMTETLQSIAEDEDSEESDLAQLEMILESPSEMTDYEVVENAGGYDGSDAVWNAEYDASDDIEYELLGDATQVPAEVFADPNSIVELYRENDFLDK
Ga0256322_1074470	Ga0256322_10744701	F088788	TTKMQVTIPEEVRRFFPVQAGSRLSWSVEGETLVARRVRGVSELRGCLTSDVAFPGIEGEKAAVAASRSSHYATKHRRG
Ga0256322_1075621	Ga0256322_10756211	F044442	PQITLKECAAIYYTIRDQRTGAKGEKIGYPNWLFNKNKIERGVYQLPIPTDAELSAYAKELADKNTPKVAKAKAKVVKLAKAKTVKVAAPAKVAVQKEDKMEMSRLQKIIDDSVDVDGDTEDFNAILRENGIEV
Ga0256322_1076948	Ga0256322_10769482	F047509	MSTVPLHLELPADEVESLRAFAIAHGLTMAELVSRWAQSLKAANRSGLSAIHPDVIAITGLVPREWTDVKTEHQHHVLTKHSQRPVRAPRL
Ga0256322_1078779	Ga0256322_10787791	F082737	MPGLSPSHPARRTSLRLAPRLRNFSVGASLLSGTPASLPVRSRNFEADFHSPTTTSLLPDRHGGVRVPALPLQLRGTLSVGPVRFDLHPRPVSRTAWGLLQSKPVAFRSCATPACLVESSLPFRVSTLPDQSTRSRWPTGNLLPATPDLPSLPTGGRIRYQHQRIIVPAPLRLCQLAV
Ga0256322_1079734	Ga0256322_10797341	F086577	VTEMAAPANGSSFARLKTLGATVIATQSWTVIGDVRVVSFAFSVLMETDAAGNRKFSGSVQGSISIGRFTFGAYVPFNKPGSQMEFVLPEVTVNGVNVNELFGVGTTVSVGADDVENLLAGAGAEVTARVKAELAQKAAELKALAKEQLRANLLAPLQELQARAELMRQQAQNGSVLLLGNVVDALRI
Ga0256322_1081323	Ga0256322_10813231	F023855	VIQYNGNLKTERYGEVRVVSLSSFIKLYQEFSSEGVQKYGSRDVTESSLVSSRSKGGLAR
Ga0256322_1084277	Ga0256322_10842771	F071977	NSQEYKDKMAAKAIFQTFSTKLGLPSNMPKYLTDSLVQWIIGEMKVTPLRRQPFLTNLNSDDQCVSEKAPDTCNEDDIKCIVLANKCFLDDEGCVRAALEKVPTSALEKYAAANRLDFAGSSYGRYIRISAPNCKKRMLASAPPTGAKRQLMQSEEETEPEADSNDSDVIHDEEDTTVDA
Ga0256322_1086027	Ga0256322_10860272	F071251	MNKAFSTHVEEDINHDGFHMTFDNGATISVMFGKHTYCDQGETTAEVAVWNQNGDWYVLNEDDNHNSLIKYPDGTEVIGHCTSNMVAHIMNLAKNL
Ga0256322_1087389	Ga0256322_10873891	F039170	GDPHYRTWDNAHFDIQPHTYWGEIVLVQHKRMGGGDIEVQTATVPWFHNSWSESQHHTGYPKGNTGLAIAAWGNVIVFYARNHLGSYFLNGNQVTWHNHGWTTIAQGIQCAKSGHHYNFLIDKGTGYLRIWGYMVGSNNIDVYGHASGSWATGKSLTGAWADWNGDAGNDQAIINQLN
Ga0256322_1089748	Ga0256322_10897481	F016245	GAGFACGANTAVTFVSPAVASGSVSISAELMLTLQLSGGVFSAGGAVQFWFGGVTNPSSDQAQVSDLAAVTTSSTGVVVGGSVTGVLPAIVKGLGTLSVGLSNTVRQGTGIRMTVSFTPVDAVPSDGRLVVTLVGAGFACGANTAVTFVSPAVASGSVSISAELMLTLQLSGGV
Ga0256322_1089763	Ga0256322_10897631	F082153	VAAPMVRPVTVTVTAVLAAIDWVAMVMTIWVLVGAATVPVGGPLPLICIPGDPALAKKPDGYVSVMLPPEPSAPPAVVVNENVAAAEVLPATRWDVAIANEELVT
Ga0256322_1089803	Ga0256322_10898031	F100737	GIVTTTSVTGSFAGFTVVSGSATITGLRDAYGAELTSTDWIIPAGFTIPIFVTSCSLSSGAILLYN
Ga0256322_1090583	Ga0256322_10905832	F029333	MTIWVLVGVATVPVGGPVPLICTPGVPVLEKKPVGYVSVMVLPVASAPPAVVVNENVAAADVLPAKRSDADIANEGLVA
Ga0256322_1090837	Ga0256322_10908371	F023532	DMVEVVAAAAALGVVRPETTHTTAAFKATGLARTSFTLGEVYVTVIVPEMAVPALVHVAVGLLLVKEVKPVKVITSAGVDDAPVNPRVMVEEVEMRLLENATEVEVKAPANMAGTATPATVSTGANPELTPNVDMVEVVAAAAALGVVRPETTHTTAAFKATGLARTSFTLGE
Ga0256322_1091467	Ga0256322_10914671	F036098	LASLMKLQEEVDGKIGAVKGEVDVQGKSMLEVLETLSAERKAADDDRKQVQTRLQGVSSDVEAVQAQSAKQAETVSGLLLKVADFEGVKPAVQADMERLQKQMSEEAQGLAGRVETLQPAVEQSGKESEGLLLASLMKLQEEVDGKIGAVKGEVDVQGKSMLEVLETLSAERK
Ga0256322_1092090	Ga0256322_10920902	F015601	MAGYSRDFLIDAFMSRYIRCTLITIEQLVNLEQMANDLYDRVGRDSFRTYASLDAEALRVYKNSLE
Ga0256322_1094650	Ga0256322_10946501	F050883	AFAAELMNEPMSIRRHAMFETWRATAEAINQVVPDMSVSICDVGEGAVLPAWVTELTGGAEDIAPDTIAWIKQSNNVFYSWHYGMVPQDIKNMLAISNEWNVPTFATETGCDQFEAALAANISHSYWHYSSYCNTGPSFGNRTVPTNTFGACILGWASGNSSACV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300024530: Metatranscriptome of freshwater microbial communities from St. Lawrence River, New York, United States - Law_Miss_RepB_8d (Metagenome Metatranscriptome)

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences