Sample 3300026422

Basic Information
IMG/M Taxon OID	3300026422 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0133460 \| Gp0293501 \| Ga0255308
Sample Name	Metatranscriptome of freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Colum_RepA_8d (Metagenome Metatranscriptome)
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Basic Information

IMG/M Taxon OID

GOLD Reference
(Study | Sequencing Project | Analysis Project)

Sample Name

Metatranscriptome of freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Colum_RepA_8d (Metagenome Metatranscriptome)

Sequencing Status

Permanent Draft

Sequencing Center

DOE Joint Genome Institute (JGI)

Published?

Use Policy

Open

Dataset Contents
Total Genome Size	79628110
Sequencing Scaffolds	37
Novel Protein Genes	39
Associated Families	31

Dataset Contents

Total Genome Size

79628110

Sequencing Scaffolds

Novel Protein Genes

Associated Families

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Coccolithales → Coccolithaceae → Coccolithus → Coccolithus braarudii	1
Not Available	22
All Organisms → cellular organisms → Eukaryota	2
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2
All Organisms → cellular organisms → Eukaryota → Cryptophyceae	5
All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Perkinsozoa → Perkinsea → Perkinsida → Perkinsidae → Perkinsus → unclassified Perkinsus → Perkinsus sp. BL_2016	2
All Organisms → cellular organisms → Bacteria	1
All Organisms → Viruses	1

Dataset Phylogeny

Taxonomy Groups

Number of Scaffolds

All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Coccolithales → Coccolithaceae → Coccolithus → Coccolithus braarudii

Not Available

All Organisms → cellular organisms → Eukaryota

All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage

All Organisms → cellular organisms → Eukaryota → Cryptophyceae

All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales

All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Perkinsozoa → Perkinsea → Perkinsida → Perkinsidae → Perkinsus → unclassified Perkinsus → Perkinsus sp. BL_2016

All Organisms → cellular organisms → Bacteria

All Organisms → Viruses

Ecosystem Assignment (GOLD)
Name	Freshwater Microbial Communities Amended With Dissolved Organic Matter (Dom) From Various Rivers In The United States
Type	Environmental
Taxonomy	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater → Freshwater Microbial Communities Amended With Dissolved Organic Matter (Dom) From Various Rivers In The United States

Ecosystem Assignment (GOLD)

Name

Freshwater Microbial Communities Amended With Dissolved Organic Matter (Dom) From Various Rivers In The United States

Type

Environmental

Taxonomy

Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater → Freshwater Microbial Communities Amended With Dissolved Organic Matter (Dom) From Various Rivers In The United States

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	freshwater river biome → river → river water
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline)

Alternative Ecosystem Assignments

Environment Ontology (ENVO)

freshwater river biome → river → river water

Earth Microbiome Project Ontology (EMPO)

Free-living → Non-saline → Water (non-saline)

Location Information
Location	USA: Louisiana
Coordinates	Lat. (^o)	29.8571	Long. (^o)	-89.9778	Alt. (m)	N/A	Depth (m)	5
Location on Map

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Location Information

Location

USA: Louisiana

Coordinates

Lat. (^o)

29.8571

Long. (^o)

-89.9778

Alt. (m)

N/A

Depth (m)

Location on Map

Zoom:

Family	Category	Number of Sequences	3D Structure?
F001904	Metagenome / Metatranscriptome	619	Y
F007472	Metagenome / Metatranscriptome	350	N
F016245	Metagenome / Metatranscriptome	248	N
F020340	Metagenome / Metatranscriptome	224	Y
F023359	Metagenome / Metatranscriptome	210	N
F025755	Metagenome / Metatranscriptome	200	Y
F026478	Metagenome / Metatranscriptome	197	Y
F027123	Metagenome / Metatranscriptome	195	Y
F032540	Metagenome / Metatranscriptome	179	N
F042749	Metagenome / Metatranscriptome	157	N
F044315	Metagenome / Metatranscriptome	154	N
F046147	Metagenome / Metatranscriptome	151	Y
F051067	Metagenome / Metatranscriptome	144	N
F051950	Metagenome / Metatranscriptome	143	Y
F059663	Metatranscriptome	133	N
F061852	Metagenome / Metatranscriptome	131	Y
F063745	Metagenome / Metatranscriptome	129	Y
F064751	Metagenome / Metatranscriptome	128	Y
F068878	Metagenome / Metatranscriptome	124	Y
F070194	Metagenome / Metatranscriptome	123	N
F070881	Metagenome / Metatranscriptome	122	Y
F070907	Metagenome / Metatranscriptome	122	Y
F072383	Metagenome / Metatranscriptome	121	Y
F079635	Metagenome / Metatranscriptome	115	N
F080126	Metagenome / Metatranscriptome	115	Y
F082176	Metagenome / Metatranscriptome	113	N
F086665	Metagenome / Metatranscriptome	110	N
F090468	Metagenome / Metatranscriptome	108	Y
F101271	Metagenome / Metatranscriptome	102	N
F103121	Metagenome / Metatranscriptome	101	Y
F104576	Metagenome / Metatranscriptome	100	Y

Family

Scaffold	Taxonomy	Length	IMG/M Link
Ga0255308_1008289	All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Coccolithales → Coccolithaceae → Coccolithus → Coccolithus braarudii	1265	Open in IMG/M
Ga0255308_1011152	Not Available	1095	Open in IMG/M
Ga0255308_1011373	Not Available	1084	Open in IMG/M
Ga0255308_1015099	All Organisms → cellular organisms → Eukaryota	939	Open in IMG/M
Ga0255308_1016056	Not Available	909	Open in IMG/M
Ga0255308_1016445	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	897	Open in IMG/M
Ga0255308_1016481	All Organisms → cellular organisms → Eukaryota → Cryptophyceae	896	Open in IMG/M
Ga0255308_1016780	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	888	Open in IMG/M
Ga0255308_1017097	All Organisms → cellular organisms → Eukaryota	880	Open in IMG/M
Ga0255308_1017193	Not Available	877	Open in IMG/M
Ga0255308_1018977	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	835	Open in IMG/M
Ga0255308_1019332	Not Available	827	Open in IMG/M
Ga0255308_1023479	Not Available	747	Open in IMG/M
Ga0255308_1025302	Not Available	718	Open in IMG/M
Ga0255308_1026599	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Perkinsozoa → Perkinsea → Perkinsida → Perkinsidae → Perkinsus → unclassified Perkinsus → Perkinsus sp. BL_2016	700	Open in IMG/M
Ga0255308_1027135	Not Available	693	Open in IMG/M
Ga0255308_1027323	All Organisms → cellular organisms → Eukaryota → Cryptophyceae	690	Open in IMG/M
Ga0255308_1027499	Not Available	688	Open in IMG/M
Ga0255308_1028532	All Organisms → cellular organisms → Eukaryota → Cryptophyceae	674	Open in IMG/M
Ga0255308_1030983	Not Available	646	Open in IMG/M
Ga0255308_1033591	All Organisms → cellular organisms → Eukaryota → Cryptophyceae	618	Open in IMG/M
Ga0255308_1034640	All Organisms → cellular organisms → Bacteria	609	Open in IMG/M
Ga0255308_1035097	All Organisms → Viruses	604	Open in IMG/M
Ga0255308_1035108	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Perkinsozoa → Perkinsea → Perkinsida → Perkinsidae → Perkinsus → unclassified Perkinsus → Perkinsus sp. BL_2016	604	Open in IMG/M
Ga0255308_1041837	Not Available	552	Open in IMG/M
Ga0255308_1042429	All Organisms → cellular organisms → Eukaryota → Cryptophyceae	549	Open in IMG/M
Ga0255308_1043067	Not Available	544	Open in IMG/M
Ga0255308_1043421	Not Available	542	Open in IMG/M
Ga0255308_1043724	Not Available	540	Open in IMG/M
Ga0255308_1043895	Not Available	539	Open in IMG/M
Ga0255308_1044200	Not Available	537	Open in IMG/M
Ga0255308_1044649	Not Available	535	Open in IMG/M
Ga0255308_1046201	Not Available	525	Open in IMG/M
Ga0255308_1046206	Not Available	525	Open in IMG/M
Ga0255308_1046549	Not Available	523	Open in IMG/M
Ga0255308_1048942	Not Available	510	Open in IMG/M
Ga0255308_1048961	Not Available	510	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0255308_1008289	Ga0255308_10082891	F001904	MKAVFLAVLALLALSAVAVSAQTDFEIAALEVAGDCHPECRWQCDDPVCPAQCHPVCERPKCQIHCEETECAKCKIHCDKPQCNVRCPKDLCEKNDCPKCETVCAPANCRTQCEAPNAVCTPMCEATKCDWKCKKPVTCPKPKCELVCERPKCAAKKRAAGPSFIETASTDKAENPTCCPCSVQANVAAAMQQASKNSEVDEEMMPSFMEVVHSMKFKEAASAENQCCPCAA
Ga0255308_1011152	Ga0255308_10111522	F072383	MKVTITYHDNQSFTVEEVVKLATDNYGRTAQVEVMPESTMAYDHIYFGLQQLVTHEQLSLLFERDASYQQDIKKLREEV
Ga0255308_1011373	Ga0255308_10113731	F079635	ASMAGTDPYYIDTDPEEAEGVCRPGYVRVMCWQNSACLQIREDVINQSQLMNFLASARPAENLSECIHLQNQLATPDNVKIICDWLAKHVEFQSRDAPAEERRAFDQRFFLLNPAGHAAYDAAANDQAKADILDSRKDWLRWRVDDPENEDPKRASVAPGVRTPEFKRTGPVEPRLHRTYEEIQHIMFVANFLELHPTDWHVDFAKKEAERIAAQPPGPFQEYGLDPADKFAETVMELCCHHLGDMILGCESPVDMQHRFPTLIGAKALTAKDRYDIVTADLWIHGDDFVEKVVPELQEQQRAEFAQARASGMSEDDIEKKFGRPIPDWTLESTQEERAFMKEVPGQEGNPTLRVPAIKI
Ga0255308_1015099	Ga0255308_10150991	F007472	MVYFTYKKLNICTVALLATVFAVLIAAMAVDWFSYKVEFSYTRVTATESSLSSSLYNYTQTTFDMFGQTVNVQRANTKIVQTSQQTYAQLGANGVNQQFKIQQAFVLIALLTAGLLFVAHTLYFFDGFRNKILFFIGITALRTILVIAFLAVVVSEIIAFLAFLGISEKIASDSPNCQNGPCQKFADTVIVQLGQTNLAIANEASVAVSLQQISTWGPTAGWYLVLATIPLTVLATIIVVINRFPIPVDSLGTGEAL
Ga0255308_1016056	Ga0255308_10160561	F044315	PASAMPHQQIDVAGLDGSESFRVRGVTRSRSVLMVGAVLALAVCGVLMYVNVGGSEPVDLLQQTCPDCLAKISRKISALSSDQKNMAQQFEVELDHLQHSVSMLKSEIAHVNPRSGLVRVIKSASLTPTAAPLPSPVRSSVIVNTPVDHDSEYDESGFKKGANRAKNMRDKKYGAFPNRWVDKDTVEAFTDHIYGPDPTTLDRKGVEREGYFTIAKIHSGMFYYINLEGVSNHHIKLIMQGTDGYNREYEGYGSIYTGPIYAGDHGVRDYFEVQDLVNGDVEFFRFSHPWTPPAMK
Ga0255308_1016445	Ga0255308_10164453	F090468	SMKLLEFTYTKSGGDVSKRAVIELVTPTQFVEGWDVTNLGESEFAKFTQVMGDLRRRQHEETMQLLQDFDLKHNYRRFKPEGMSDVQVEYV
Ga0255308_1016481	Ga0255308_10164811	F042749	IFAISHRPITTMIGATWMKYAAVPCLLLLAAVAVLYTDSSQQSAEPNLDVALVSSSQQTQSLALFKHAAIEDVYVYAGPEEHTRHLVPFICRLIKRHRFRLNIHQFFSVDDAPLRSVLWSHDSRVVIFPPFESYPQISAKGFTDLRAYVAAGNNVVFMGSYIALQVMNDAFGFSLRDDYKEGPYYRNDRNVRGTEFEYLPSRLNEPSPRVYGAMAKSLPPGGFSLYHSLGSVVVFYVRYDLGTIVYIGYQFDNPYQIDSWVRVIHAAMAM
Ga0255308_1016780	Ga0255308_10167801	F104576	NNLSTTEILIQQITTDEGLLAPYGVGEINLQVRYALE
Ga0255308_1017097	Ga0255308_10170971	F007472	AVGIQLGKMVYFTYKKLNICTVALLATVFAVLIAAMAVDWYSYKVEYSYTRVSASDTSLASSLYNYTQTNFDMFGQIVNVQAANTKIVRTTQQTYAQLGATSVNQQFKIQQAFVLIALLTAGLLFVAHTLYFFDGFRNKILFFVGITALRTILIIALLVVVSAEIIAFLAFLGLSDKISSDSPNCLSGPCQKFSDTVTTQLGQNFITIGNEASVAVSLQSVATWGPTAGWYLVLATIPLTVLATIIVVINRFPIPVDSLGTGEAL
Ga0255308_1017193	Ga0255308_10171932	F044315	MLALVVCGLVMFVNNGSARAQPLDLLQQTCPGCLAKISKKINALSADQQHMAQQFESELTQLQQSVSKLKAEITHVNPRSGLVRVIKSEVPKAVSPAGASEAAIAVSTQSNHDPEFDESGFKKGANRARNMRDKKYGAFPNRWVDKDTVEAFADHIYGPNPTTLDRKGVEREGYFTMAKIHSGMFYYINLEGVSNHHIKLIMQGTDGYNREYEGYGSIYTGPIYDGDHGVRDYFEVQDLVSGDVEFFRFSHPWTP
Ga0255308_1018977	Ga0255308_10189771	F101271	ADLPIEQHQGDAMRLLFDFSEAIAHQREALAKRDWAKLQQSIQALQQAMHQIASFPGGAEGVRHQLVASEGEARQTADRLIEKVAIERRSSAELIRLQLQRLQALHTMTSLDEETTTYSESGTSKGRIGRLSTWV
Ga0255308_1019332	Ga0255308_10193321	F080126	MKKVTLSLAAIALVGLYAGSASAQCAFDIAPAKGVRGSMVRNYAPCPGTENPTANTTTQGGTDACTPVTPAEVSGNGTLYSYDVKGKCDVRTSAKLVSDCAEVEDSAGNNLGLAPGACHVTYVTSKCSGILGQDGVTPAGASDDGWALATLSRATLDDPSNGDMTVIDFPVTFLYSTPDKGKIEVDSSSAQALVPLVGATGAKLPPCTQIEVVNVIIKDPAGLPFAK
Ga0255308_1023479	Ga0255308_10234791	F070881	SKIKTHTHIQILNYNTNINTIMLKKINVSKLIQNQIKSFSFVVFVTTFALIFLNSSSNIIPLNILTFMGSILLFHYYPNYYDIVISREPKLTPLLASIDFMLHYLPLIYIYIFKVFNKTEINYSLCLMMILSYVLLFHSDIRGIYFNINEYFL
Ga0255308_1025302	Ga0255308_10253021	F061852	AIGAILRLSENDIDSLTKANKSALKAIFDALANSKPL
Ga0255308_1026599	Ga0255308_10265991	F023359	VESYSTYDSNSGGMVKGYFKTSQAFVVIVLVVSFVLTVLLTLFQLDRVRNWFIFSIGMSFTRIAITLLAGLVLLSAVIAFLSFLGLPSAFKEEIPNCVDGPCREFSNSLKSPDLIEVQNGVSYSLVNTRAWGPVEGWFIVLGIIPVSVVLLALIVLNKFPLPIDSEASSGEAL
Ga0255308_1027135	Ga0255308_10271351	F051067	MSYNSLTYFDLDLKTLTPMDKFIMRAFVDESYLTNLYQATDWAQQLKMQGQTYCYRYVPQQLGLYSKMYDQNDLIDLTFISYIVPNPYTYDFSVPFNVNGHIIYVDEVDKSFIIARKGREFYESLYAALEMAKEFRANGRYYCYNMVTPNWFLPENQYAAGIPGQKLILLWYNMNYVIKN
Ga0255308_1027323	Ga0255308_10273231	F086665	EDVYVYSGKEEHTRHLVPFICRLIKRHRFRLNIHQFFSVDDAPLRSVLWSHDSRVVIFPPFESYPEISSKGFTDMRAYVAAGNNVVFMGSYIALQVMNDAFGFSLRDDYKEGPYYRNDRNVRGTEFQYLPSRLNEPSPRVYGAMAKSLPPGAFSLYDSLGSVVVFYVRYDLGTIVYIGYQFDSPYQIDNWVRVIHAAMAM
Ga0255308_1027499	Ga0255308_10274991	F051950	YISTEASYQLNFNVGFSTTRSDVLVHLAQXQYXXXFXFAFLXSFYYLVASRVVRYRSLKMRPKMSTSFRPHGKXGDFLAAVIPAIXCLNILTNSNFILRLIEXQSESSLFTIRVRARQXYXIYKFELKNFTDILTVPKNVGYNRXCVNTFGDLQVAEDYLYVLQLRSQNKXVKNYXTEVLQKTGGIKKNHIVAPQEQLRLELNNQTNINININKLSSLIIKSDNNLIN
Ga0255308_1028532	Ga0255308_10285321	F026478	RAVLLIAFVLSLLLVAECSKPKRKAVALDDEEVIQAKDFALKEIIKLSDSYRDMKIAKLISAEKARSAFSDGTNFFLKMELSCVSKCEAPLSPASTCRRGKYKGTNEIIVFWKDDGHYDGIAIDEFPQMDGEFHPCTPSYKGSEKCNPAEHRTPEQAALFMDDPEDDSVPRKEDL
Ga0255308_1030983	Ga0255308_10309831	F070194	VVFDTETSCQAFPVYDMAWRIVDRQGREYNRGSYFMPDIIERITPIFRKHEEYPEYVAKGHVEQRFYQDVKDTFNRQVKTLREKGHRILLVAYNADFDRKALKRTAELMGGSRRSRFFRFEPEWVDLWQYWAESAPRHYTSERLTENGNWKSSLEEVFRFENHNPEGYAEKHTAWSDTDDAISVLEKVIRRKKRLPVYKGDAWMPGGWRALQKRC
Ga0255308_1033591	Ga0255308_10335911	F032540	VVAVVMLAFGCAAVALAAASASTDSKLRDTSVLKVGVSDRLDVWRQYQNDEDVNPRKKKTAKADWEKQRSIPDFVDGIIGPSPTAMDEGGSKSRGSFNVKKITDKTDFYYLRITDRSGNGDRIRAELVGSDGYRLDWVGFGEIFTGPIHEGNLGETDYLRVEDLITGEEQFFRFRF
Ga0255308_1034640	Ga0255308_10346401	F027123	MATVKRYNIFCPKCNQRFPVFASLHHSIDVDSWIREKSDTHDCKAYADQLAKERSPRPINPLKASKKGA
Ga0255308_1035097	Ga0255308_10350972	F063745	MDQLIIDSINSALKPNQQPQTPTKLSPRFKALARECGFVFWGNEPHGPGPGNIDWSCDYSTEFEHYSRELVTWTCELMRQEIVRDYLFKASKNTYQHLVVQD
Ga0255308_1035108	Ga0255308_10351082	F023359	VIVLVVSFVLTVLLTLFQLDRVRNWFIFSIGMSFTRIAITLLAALVVLSSVIAFLSFLGLPQAFKDEIPNCVDGPCREFSNSIKLSDLLEVQGANTYSLVNTRTWGPVEGWFIVLGIIPVSVVLLALVVLNKFPLPIDSEASSGEAL
Ga0255308_1041837	Ga0255308_10418371	F059663	LSGILSIYFTLVFFAGFRAKIVYSWGATGARRIAMLTSLFVVISVVIAFLATTGITNALKTDNPVCVDGPCNKFVDSQTTSLGTYTHLGVVYNMNSSMTWGPAAGWFLFLACIPLSLLLTIVAGLNNYPVPIDSLGSGEAL
Ga0255308_1042429	Ga0255308_10424291	F070907	LRKMNYGSVERVSPLVRESRKPRIVALAGAAVLLGLIALGALIAQSSQPSELLGEMLARGENARNKGVPPTVFAPPPEPADWDGAKAIIGKMPPTGVAPSALQEAGFETRGSITVRRDLAAENMYFRIYGRINHHLKCTLRQYRRMSMEYQGEVIYTGFKRVYTGQSEIQTGHLPRTHDTEFD
Ga0255308_1043067	Ga0255308_10430672	F064751	MVAAAVPEAAPAVVRTVVLLEDAAGVEVAVKDVTVLAMELTDPKK
Ga0255308_1043421	Ga0255308_10434211	F080126	PVIPFQNGTGNSTTYQYTAKGKCSVSTSAKLVADCALVTDSSGAVLGLQQVPCHITYVSSKCSGIATSDETVLIDAGDIGWSLATLTRATFNDATNGDMTVIDFPVTFNYSTPSSGKMAVKSSSAEALIPLVGVNNADLPACTSLEIVNIVIKDPAGLPFAKLGGATKP
Ga0255308_1043724	Ga0255308_10437241	F025755	QITISGYAEVGMITGSAKQTRSTAHSKGLGSEFLVTVAGKGTMSNGWTFSGYQNFDTDEVGNGVDAANVNPMTTRALEISPNKDFKLFYTYDGVYGGEIARTAIPVVTERPVDLTGLSGLSEFIDVTSGGHAVGAEA
Ga0255308_1043895	Ga0255308_10438951	F025755	QMKNKVLKAIGALSVASLMSTSAFSQITISGYAEVGFITGDAEGTRGLSSSKGLGSEFLVTVAGKGTLSNGWTFTGYQNFDTDEVGNGIDTANSNPMTTRALEISPNKDFKLFYTYDGVYGGEIARTAVPVVTERPVDLTGASTLAEFIDVTSGGHAIGFDVLNVGPAGRFSVAYNPNI
Ga0255308_1044157	Ga0255308_10441572	F046147	IETTNKDPVGLGTLSDPHAIEDCVACRTIWLQVEMDVGNTALEENIYNSFSQNALEAQKSPIFYPAVHEMFNSIDDMVGDYMEGFTVNQVCENARMCR
Ga0255308_1044200	Ga0255308_10442001	F020340	FADLGLQGDAGTHFRLRFTYNTLTVDSNEFNVKPNHMHVSVHPSDGQYEAGASKADIGAGITVQARDGGNNVLTGADNTNAGSDTVVVTVLEASGSVLDANLLGSKGLFLSSGARTFADLGLQGDAGTHFRLRFTYNSLSVESNEFNVRPNHIHVSVHPSDGQYGAGASKADIGAGIT
Ga0255308_1044649	Ga0255308_10446492	F064751	VSPVSVMVIAAVPDAAPPVVRTIVVFAEVTLPEVAVNDVTPLAMEVTDPKK
Ga0255308_1046201	Ga0255308_10462011	F016245	SAGGLVQFWFGGVTNPAMNQSQVRDLAAVTTTSSGEVIGGSVTGQLPAIVNGLGNLSVGLSNTVRQGTGIRMSVSFTPVDAFPSDGRFIITLVGAGFACSDNTAVTFVSPAGGSGSVSISAGLVLTLQLSGGAFSAGGLVQFWFGGVTNPAMNQSQVRDLAAVTTTSSGEVIGG
Ga0255308_1046206	Ga0255308_10462061	F016245	NPNSNQSHISNIHAATLNAPGNIVGASVTGYLPAIVNGLGALVVGLSNTVRQGTGIVMTVSFTPVDAVPNDGRFVLTLVGAGFACSASTTVTFVSPADGSGYVSISAGLVLTLQLSGGTFSAGQAVEFVFGGVTNPNSNQSHISNIHAATLNAPGNIVGASVTGYLPAIVNGLGA
Ga0255308_1046549	Ga0255308_10465491	F016245	VTTSSTGAVVGGSVTGGLPAIVNGLGSLSVGLSNTVRQGTGIRMTVSFTPVDAVPGDGRFIMTLVGAGFACAANTAVTFVSPAGASGSVSIGPGLVLTLQLGGGVFSAGGAVQFWFGGVTNPSSDQAQVNNLAAVTTSSTGVVVGGSVTGVLPMVVNDLGFNGPTISLSTHLKA
Ga0255308_1047638	Ga0255308_10476381	F082176	SVVGVRPKYLVLGATATLELTADWPVVDDHYACVLSSGQSQSLVPLVWTGSGSVGTCAFRDTTMFETGTASLAIKHDVHEFSVDAGTLQLVPSVSVLKISPSAVEAGATSVLEIEVDADCDCRAGLECRVGQARAPAMCSAGSRTLRCAVVPVGGAGVRTFALMMDGQLLS
Ga0255308_1048942	Ga0255308_10489421	F103121	NFDIIAVVNNSVTYCFQVYATNANGNSAPSNIAEATPFNNNLPTRLWARFEPNCPSYKIEGNNVAETSYEMQRKAGVLQCPANGRLNFTKARLWSMASRNELTRKMAWASQSQLYTYDNTTNVSNQEGVGLKVVNNTLSCWTPQPPIICNSSSSSNVPGKPVVLCFSTD
Ga0255308_1048961	Ga0255308_10489611	F068878	MTEKAKKWSDATVDHLMKLVGKGRPVSADTVQHAAEELGEGFTARSVASKLRQLEVEVASMAKEKTSAFTEDEGAELAEFVVSNSGEYTYKQIAESF

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300026422: Metatranscriptome of freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Colum_RepA_8d (Metagenome Metatranscriptome)

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences