Sample 3300026444

Basic Information
IMG/M Taxon OID	3300026444 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0133460 \| Gp0294653 \| Ga0256364
Sample Name	Metatranscriptome of freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Atlam_RepC_8d (Metagenome Metatranscriptome)
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	154374222
Sequencing Scaffolds	65
Novel Protein Genes	69
Associated Families	53

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	37
All Organisms → cellular organisms → Bacteria	3
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	8
All Organisms → cellular organisms → Eukaryota	3
All Organisms → cellular organisms → Eukaryota → Cryptophyceae	3
All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Perkinsozoa → Perkinsea → Perkinsida → Perkinsidae → Perkinsus → unclassified Perkinsus → Perkinsus sp. BL_2016	2
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Postciliodesmatophora → Heterotrichea → Heterotrichida	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1
All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Pyrenomonadales → Geminigeraceae → Guillardia → Guillardia theta → Guillardia theta CCMP2712	1
All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Pyrenomonadales	1
All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1

Ecosystem Assignment (GOLD)
Name	Freshwater Microbial Communities Amended With Dissolved Organic Matter (Dom) From Various Rivers In The United States
Type	Environmental
Taxonomy	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater → Freshwater Microbial Communities Amended With Dissolved Organic Matter (Dom) From Various Rivers In The United States

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	freshwater river biome → river → river water
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline)

Location Information
Location	USA: Louisiana
Coordinates	Lat. (^o)	29.8571	Long. (^o)	-89.9778	Alt. (m)	N/A	Depth (m)	5
Location on Map

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Family	Category	Number of Sequences	3D Structure?
F000240	Metagenome / Metatranscriptome	1481	Y
F000344	Metagenome / Metatranscriptome	1257	Y
F000370	Metagenome / Metatranscriptome	1221	Y
F004323	Metagenome / Metatranscriptome	443	Y
F005668	Metagenome / Metatranscriptome	393	Y
F007472	Metagenome / Metatranscriptome	350	N
F009078	Metagenome / Metatranscriptome	323	Y
F011267	Metagenome / Metatranscriptome	293	Y
F014949	Metagenome / Metatranscriptome	258	Y
F015184	Metagenome / Metatranscriptome	256	Y
F016245	Metagenome / Metatranscriptome	248	N
F017444	Metagenome / Metatranscriptome	240	Y
F020340	Metagenome / Metatranscriptome	224	Y
F020528	Metagenome / Metatranscriptome	223	Y
F022158	Metagenome / Metatranscriptome	215	Y
F023359	Metagenome / Metatranscriptome	210	N
F025755	Metagenome / Metatranscriptome	200	Y
F026478	Metagenome / Metatranscriptome	197	Y
F029333	Metagenome / Metatranscriptome	188	Y
F034901	Metagenome / Metatranscriptome	173	Y
F036560	Metagenome / Metatranscriptome	169	N
F042749	Metagenome / Metatranscriptome	157	N
F044315	Metagenome / Metatranscriptome	154	N
F045790	Metagenome / Metatranscriptome	152	N
F047008	Metagenome / Metatranscriptome	150	N
F050983	Metagenome / Metatranscriptome	144	Y
F051067	Metagenome / Metatranscriptome	144	N
F052593	Metagenome / Metatranscriptome	142	Y
F054804	Metagenome / Metatranscriptome	139	N
F059099	Metagenome / Metatranscriptome	134	Y
F060853	Metagenome / Metatranscriptome	132	N
F061852	Metagenome / Metatranscriptome	131	Y
F061856	Metagenome / Metatranscriptome	131	Y
F063745	Metagenome / Metatranscriptome	129	Y
F067528	Metagenome / Metatranscriptome	125	Y
F068878	Metagenome / Metatranscriptome	124	Y
F072383	Metagenome / Metatranscriptome	121	Y
F078630	Metagenome / Metatranscriptome	116	N
F079635	Metagenome / Metatranscriptome	115	N
F080126	Metagenome / Metatranscriptome	115	Y
F082153	Metagenome / Metatranscriptome	113	Y
F082176	Metagenome / Metatranscriptome	113	N
F085384	Metagenome / Metatranscriptome	111	Y
F086577	Metagenome / Metatranscriptome	110	Y
F087401	Metagenome / Metatranscriptome	110	Y
F089936	Metagenome / Metatranscriptome	108	Y
F095362	Metagenome / Metatranscriptome	105	Y
F095369	Metagenome / Metatranscriptome	105	N
F100446	Metagenome / Metatranscriptome	102	N
F100451	Metagenome / Metatranscriptome	102	N
F101271	Metagenome / Metatranscriptome	102	N
F102614	Metagenome / Metatranscriptome	101	N
F102620	Metagenome / Metatranscriptome	101	Y

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
Ga0256364_1003665	Not Available	2600	Open in IMG/M
Ga0256364_1008786	All Organisms → cellular organisms → Bacteria	1740	Open in IMG/M
Ga0256364_1016967	Not Available	1264	Open in IMG/M
Ga0256364_1019122	Not Available	1192	Open in IMG/M
Ga0256364_1020446	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1154	Open in IMG/M
Ga0256364_1029524	Not Available	955	Open in IMG/M
Ga0256364_1030144	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	945	Open in IMG/M
Ga0256364_1032001	Not Available	915	Open in IMG/M
Ga0256364_1032564	All Organisms → cellular organisms → Eukaryota	907	Open in IMG/M
Ga0256364_1033248	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	898	Open in IMG/M
Ga0256364_1033444	All Organisms → cellular organisms → Eukaryota → Cryptophyceae	895	Open in IMG/M
Ga0256364_1033945	Not Available	889	Open in IMG/M
Ga0256364_1034427	All Organisms → cellular organisms → Eukaryota	882	Open in IMG/M
Ga0256364_1034564	Not Available	880	Open in IMG/M
Ga0256364_1034747	All Organisms → cellular organisms → Eukaryota	878	Open in IMG/M
Ga0256364_1035615	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	867	Open in IMG/M
Ga0256364_1036010	Not Available	862	Open in IMG/M
Ga0256364_1037636	Not Available	841	Open in IMG/M
Ga0256364_1038699	All Organisms → cellular organisms → Eukaryota → Cryptophyceae	829	Open in IMG/M
Ga0256364_1039288	Not Available	822	Open in IMG/M
Ga0256364_1039442	Not Available	820	Open in IMG/M
Ga0256364_1042159	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	791	Open in IMG/M
Ga0256364_1044426	Not Available	769	Open in IMG/M
Ga0256364_1044543	Not Available	768	Open in IMG/M
Ga0256364_1044829	Not Available	765	Open in IMG/M
Ga0256364_1046487	Not Available	750	Open in IMG/M
Ga0256364_1046793	Not Available	748	Open in IMG/M
Ga0256364_1047615	Not Available	741	Open in IMG/M
Ga0256364_1047685	All Organisms → cellular organisms → Eukaryota → Cryptophyceae	740	Open in IMG/M
Ga0256364_1048085	Not Available	737	Open in IMG/M
Ga0256364_1048595	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia	733	Open in IMG/M
Ga0256364_1050327	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	719	Open in IMG/M
Ga0256364_1050466	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	718	Open in IMG/M
Ga0256364_1051072	Not Available	714	Open in IMG/M
Ga0256364_1051078	Not Available	714	Open in IMG/M
Ga0256364_1052017	Not Available	707	Open in IMG/M
Ga0256364_1052388	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	704	Open in IMG/M
Ga0256364_1052471	Not Available	704	Open in IMG/M
Ga0256364_1057302	Not Available	672	Open in IMG/M
Ga0256364_1062111	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	644	Open in IMG/M
Ga0256364_1063400	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
Ga0256364_1065929	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Perkinsozoa → Perkinsea → Perkinsida → Perkinsidae → Perkinsus → unclassified Perkinsus → Perkinsus sp. BL_2016	624	Open in IMG/M
Ga0256364_1066363	Not Available	622	Open in IMG/M
Ga0256364_1069327	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	607	Open in IMG/M
Ga0256364_1071575	Not Available	597	Open in IMG/M
Ga0256364_1073005	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Postciliodesmatophora → Heterotrichea → Heterotrichida	591	Open in IMG/M
Ga0256364_1076887	Not Available	574	Open in IMG/M
Ga0256364_1077898	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Perkinsozoa → Perkinsea → Perkinsida → Perkinsidae → Perkinsus → unclassified Perkinsus → Perkinsus sp. BL_2016	571	Open in IMG/M
Ga0256364_1079353	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	565	Open in IMG/M
Ga0256364_1080632	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	560	Open in IMG/M
Ga0256364_1082459	Not Available	554	Open in IMG/M
Ga0256364_1082943	Not Available	552	Open in IMG/M
Ga0256364_1082996	All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Pyrenomonadales → Geminigeraceae → Guillardia → Guillardia theta → Guillardia theta CCMP2712	552	Open in IMG/M
Ga0256364_1085811	Not Available	543	Open in IMG/M
Ga0256364_1085813	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
Ga0256364_1085959	Not Available	542	Open in IMG/M
Ga0256364_1088354	All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Pyrenomonadales	535	Open in IMG/M
Ga0256364_1091622	Not Available	525	Open in IMG/M
Ga0256364_1091691	Not Available	525	Open in IMG/M
Ga0256364_1091782	Not Available	525	Open in IMG/M
Ga0256364_1092257	Not Available	523	Open in IMG/M
Ga0256364_1092538	Not Available	522	Open in IMG/M
Ga0256364_1094708	Not Available	516	Open in IMG/M
Ga0256364_1097702	Not Available	508	Open in IMG/M
Ga0256364_1098994	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	505	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0256364_1003665	Ga0256364_10036651	F072383	MKVTITYHDNESYTVEEVVKQALHNYGRSAQVEVMPESTMAYDHIYFGLQQLITHEQLSLLFDRDN
Ga0256364_1008786	Ga0256364_10087862	F061856	MNQHQNQVSRAMIHINDVKYDLLKIAELYDGVLQEGLGHMPADMFNAYLSDLRGEDWVHDFEVSEITLKEQSYTYDISVQITKDRTPKKLKIHVGLIKVLGQNSLCLK
Ga0256364_1016967	Ga0256364_10169671	F051067	MSYNSLTYFDLDLKTLTPMDKFIMRAFVDESYLTNLYQATDSAQQLKMQGQTYCYRYVPQQLGLYSKMYDQNDLIDLTFISYIVPNPYTYDFSVPFNVNGHIIYVDEVDKSFIIARKGREFYESLYAALEMAKEFRSNGRYYCYNMVTPNWFLPENRYAAGIPGQKLILLWYNMNYVIKN
Ga0256364_1019122	Ga0256364_10191221	F079635	GTDPYYVDTDPEDAEGVVRPGYVRVVCWQSSACLQIREDIINQSQLMNFLASARPADNLSECIHLQNQLATPDNVKIICDWLAKHVEFQSRDAPAEERRAFDQRFFLLNPAGHAAYDSASNDQARADILDARKDWLRWRLDDPENEDPKRESVAPGGVRTPAFQRTGPVQERLHRTYEEIQHIMFLANFLELHPTDWHVDFAKKEAERLAAQAPGPFQEYGLDPADKFAETIMELCCHHLGDMILGCESPVDMQHRFPTLIGAKALTAKDRYDIVTADLWIHGDDFVEKVVPELQEQQRAEFAQARASGMSEDDIEKKFGRPIPDWTLESTQEERAFMKEVPGQEGNPTLRVPAIKINDQQPADPGFEIGHHWWG
Ga0256364_1020446	Ga0256364_10204464	F050983	LATNKIILAGATTNTAGAYFQTVTVTAVDSGNGTVVPAGIYVMFPSANVTVLANDGSSNATVMAANTGGVVISDGVNVYVKNSSGNANVTMLDINGGQAAGETYA
Ga0256364_1029524	Ga0256364_10295241	F022158	CTEPGCTKCAQSPTDKCATHGGGKRCPHCITWPDSRSGSIAYDGYCATCFKQLFPNDERSKVIYAHTKEIRVRNAINAMFEGFIHDKPLYTGQCNCTHRRRIDHRKQIGNTVLAIETDEFGHTGYDPKDEDIRYDDLYMIHSGKWVFIRFNPDGNGVDMVDKLARLMQEIQIQIERIENDENNELLEIIKMYY
Ga0256364_1030144	Ga0256364_10301443	F052593	MAYIYPAPGVANVELTLEIEVSGDTNALAIPALQDITINNANDVFTWTQLDSGSKFNIPTTASNSIDMNLVVDQTVFFGSGSGADVAVNKGLFGLSKEKKLISFSLYMGDTNSGSSGKTISGTGYVVGLAPTVSADSPVWVTPVSITVVGDYT
Ga0256364_1032001	Ga0256364_10320012	F044315	MLALVVCGLVMFVNNGSARAQPLDLLQQTCSGCLAKISKKINALSADQQHMAQQFESELTQLQQSVSKLKAEITHVNPRSGLVRVIKSDVLKSASPAGASEAAIAVSTQSTHDPEFDESGFKKGANRARNMRDKKYGAFPNRWVDKDTVEAFADHIYGPNPTTLDRKGVEREGYFTMAKIHSGMFYYINLEGVSNHHIKLIMQGTDGYNREYEGYGSIYTGPIYDGDHGVRDYFEVQDLVSGDVEFFRFSHPWTPPAMK
Ga0256364_1032564	Ga0256364_10325642	F007472	IQLGKMVYFTYKKLNICTVALLATVFAVLIAAMAVDWYAYKVEFSYTRVTSSDSSLASSLYNYTQTTFDMFGQTVHVQSANTKIVRTTQQTYAQLGASNVNQQFKIQQAFVLIALLTAGLLFVAHTLYFFDGFRNKILFFVGITALRTILIIALLIVVASEIIAFLAFLGLSDKVASDSPNCLSGPCQKFADSVTTQLGQSTLAIGTETSVSVALQQIASWGPTAGWYLVLATIPLTVLATIIVVINRFPIPVDSLGTGEAL
Ga0256364_1033248	Ga0256364_10332481	F011267	KVWGDNMPSTWDPMDGATPNYSSGQTDGVTVPARSVPIGVAQYDLYRPFDKGTSQGAGFITHGYVEYPMVSGVNADVTVGSVVRSDNMGRPVKAAAADFLDSSDVYSYLQVGKVIEIEKFATNFDDGLLSYMQLPSDPGALKTVYELTRSGAFSGKLGIRSNLDVTNVIGAFRVNLTL
Ga0256364_1033444	Ga0256364_10334441	F042749	HIFAISHRPITTMIGATWMKYAAVPCLLLLAAVAVLYTDSSQQSAEPNLDVALVSSSQQTQSLALFKHAAIEDVYVYAGPEEHTRHLVPFICRLIKRHRFRLNIHQFFSVDDAPLRSVLWSHDSRVVIFPPFESYPQISAKGFTDLRAYVAAGNNVVFMGSYIALQVMNDAFGFSLRDDYKEGPYYRNDRNVRGTEFEYLPSRLNEPSPRVYGAMAKSLPPGGFSLYDSLGSVVVFYVRYDLGTIVYIGYQFDNPYQIDSLVRVIHAAMAM
Ga0256364_1033945	Ga0256364_10339454	F095369	VAYYIRDGELIPVAIPLNQRVKIGKYYEPPQLSYLSNDQLWIQDVYVFKQIPWYMIKNRYERYLLYASLYGAIVVMLTMIGRYWLGAPN
Ga0256364_1034427	Ga0256364_10344271	F007472	IQLGKMVYFTYKKLNICTVALLATVFAVLIAAMAVDWYSYKVEFSYTRVTASDSSLASSLYNYTQTNFDMFGQTLNVQSANTKIVRTSQQTYAQLGASGVNQQFKIQQAFVLIALLTAGLLFVAHTLYFFDGFRNKILFFIGITALRTILIIALLIVVSAEIIAFLAFLGLSDKIATDSPNCLSGPCQKFADTVTTQLGQNVITINSEAAVPVSLQSVATWGPTAGWYLVLATIPLTVLATIIVVINRFPIPVDSLGTGEAL
Ga0256364_1034564	Ga0256364_10345641	F080126	MKKVTLSLAAIALVGLYAGSASAQCAFDIAPAKGVRGSMVRNYAPCPGTENPTANTTTQGGTDACTPVTPAEVSGNGTLYSYDVKGKCDVRTSAKLVSDCAEVEDSAGNNLGLAPGACHVTYVTSKCSGILGQDGVTPAGASDDGWALATLSRATLDDPSNGDMTVIDFPVTFLYSTPEKGKMEVDSSSAQALAPLVGATGAKLPPCTQIEVVNVIIKDPAGLPFAKLGSATVPK
Ga0256364_1034747	Ga0256364_10347471	F007472	QLGKMVYFTYKKLNICTVALLATVFAVLIAAMAVDWYSYKVEYSYTRVSASDTSLASSLYNYTQTNFDMFGQIVNVQAANTKIVRTTQQTYAQLGATSVNQQFKIQQAFVLIALLTAGLLFVAHTLYFFDGFRNKILFFVGITALRTILIIALLVVVSAEIIAFLAFLGLSDKISSDSPNCLSGPCQKFSDTVTTQLGQNFITIGNEASVAVSLQSVATWGPTAGWYLVLATIPLTVLATIIVVINRFPIPVDSLGTGEAL
Ga0256364_1035615	Ga0256364_10356152	F101271	TTDLPIGQHERDAMLLLFDFSEAIAHQREALAKRDWVKLQRSIQALQHAMHQIASFPGGAEGVRHQLVASEGDARETADRLIEKVAIERRSSAELIRLQLQRLQALQAMTSLDDDAGTYTESGATKGRSGRLSTWV
Ga0256364_1036010	Ga0256364_10360102	F045790	MMDIHELREELLEQAMEHLDCKFRTQKKFALMFFEHKLKQGVPIDNYLSFMPQIYTPQEALELAK
Ga0256364_1037636	Ga0256364_10376362	F054804	MKIIITTQVYNNYGTALEPRWKPKGAGDYVVNLPCGYTDEDVKRKLELAKAVLELHNTPMWWDTWLGYHVVEDNILTDFESQQLEWDGRIDFPAEVLNV
Ga0256364_1038699	Ga0256364_10386991	F042749	SVASAQSLFTLSSVAASLGPLSKMAGSTWMKIAVVPCVLLVAMVAVMYISPSETSTEPNTKVALVQSAQQVQSLALFKHAAIEDVYVYSGKEEHTRHLVPFICRLIKRHRFRLNIHQFFSVDDAPLRSVLWSHDSRVVIFPPFESYPEISSKGFTDMRAYVAAGNNVVFMGSYIALQVMNDAFGFSLRDDYKEGPYYRNDRNVRGTEFQYLPSRLNEPSPRVYGAMAKSLPPGAFSLYDSLGSVVVFYVRYDLGTIVYIGYQFDSPYQIDNWVRV
Ga0256364_1039288	Ga0256364_10392881	F000344	MRPRSAHAALSGVGEHTARESESAQCCAAGKERVANAHPHFEP
Ga0256364_1039442	Ga0256364_10394421	F009078	MVHVNKPAHPREGAITDKTGGCNNDAGSIGKSFCLQARKGNLSRRKVTGGADFYTKPAQLIGMRKGSVFVRGVAPKGLYAV
Ga0256364_1042159	Ga0256364_10421592	F078630	MFNQPLLFIDSVQNAKMQFVEKYVRHPDLKNDMIIYIDAQTRFLHSAVEATNGIISTCMREFYHTKLEKLLNPFSIDWHKAGWDAWIAQSRAEQKTNK
Ga0256364_1044426	Ga0256364_10444261	F102620	MKLFDLIKDRVKEPQGVISDNEMVVLNRRDFLYSETSTASAFLRLFRAERVTYEMYSIIDFVHTNVCKIRPPTEVRVFQLSQSMTLPSLAASVLVGDLASNFRAYAPRGVQGIQSQDAFGQTLAKRFEVQLNSGLSMTDIGSGENAVDIIFCNASNEAEVSSGLKAFERVKR
Ga0256364_1044543	Ga0256364_10445431	F020340	NEFNVRPNHMHVSVHPSDGQYGAGASKADIGAGITVQARDGGNNVLTGADNTNAGSDTVVVTVLEASGSVLDANLLGSKGLFLSSGARTFADLGLQGDAGTHFRLRFTYNSLAVESNEFNVRPNHMHVSVHPSDGQYGAGASKADIGAGITVQARDGGNNVLTGADNTNAGSDTVVVTVLEASGSVLDANLLGSKGLFLSSGARTFADLGLQGDAGTHFRLRFSYNSVEVDSNEFNVKPHHMHVSVHPSDGQYSAG
Ga0256364_1044829	Ga0256364_10448291	F086577	AELKALAKEQLRANLLAPMQELEARVEQMRQLAQNGSVLLLGNVVDSLRISGFDSKVLNPGVAGLPNFGRFGLTDLQIEFAAPANGSSYSRLTTLGATVIATEDWKIIGDVRVLSFAFSVLMETDGAGNRKFSGSVQGSIGIGRFTFGAYVPFNKPGSQMEFTLPEVTVNGVNVNELFGIGTQVSVSPADIEKLLESEGGDVKARVKAELAQKAAELKALAKEQLRANLLAPMQELEARVEQMRQLAQNGSVLLL
Ga0256364_1046487	Ga0256364_10464871	F089936	PHNRKAYFMKKALIGMAVGAMALGASVVPASAGYLGSSDDLTLWDGIAGTDGGSTDAPQGPEALCNDGQDDIFEALVLTGGWASRLDTDGNGKPRYTVFQPYDLILNGLLGALGLEISDLNSQPAVVQGILADHIANGSFDENELEDTDLTRITMRSGFVATLTESEYDVMFPPAATFGERDMYENVYIEGVKIEDGGQYANGWLYCIGGIIDSTPQVSHEGLNSEDTPNDGTPGGTNSLPDTL
Ga0256364_1046793	Ga0256364_10467931	F089936	HNRKAYFMKKALIGMAVGAMALGASVVPASAGYLDETETLWDGIAGTDGGSTDVAQSPASALCNDGQDDIFEAMVLTGGWAERLDTDGNGKPRYTVFQPYDVILNGLLGALGLEISDLNSQPAVVQGVLADHIANGSFDENELEDADLTRITMRSGFVATLSNSEYDIPGALLAGTFGERSIYDNVYIEGSKIQNGSPYSNGWLYCIAGIIDSTPQVSHEGLNSEDTPNDGTPGGTNSLPDTL
Ga0256364_1047615	Ga0256364_10476151	F089936	PHNRKAYFMKKALIGMAAGAMALGASVVPASAGYGEDNLWDGIAGTDGGNTNGTALCDDDEDDIFEALILTGGWAKRLDTDGNGKPRYTVFQPYDAVLDGLLDALGLSIADLNDQPATVQAVLADHIANGSFDPNELEDTDLTRITMRSGFVATIFGPGEQLSAPRSVPGGAFIEGAQIVEAAQFDNGWLYCILGVIDSTPQEAHEGLNSEDTPNDGTPGGTNSLPDTL
Ga0256364_1047685	Ga0256364_10476851	F026478	DDEEVIQAKDFALKEIIKLSYSYRDMKIAKLISAEKARSAFSDGTNFFLKMELSCVSKCEAPLSPASTCRRGKYKGTNEIIVFWKDDGHYDGIAIDEFPQMDGEFHPCTPSYKGSEKCNPAEHRTPEQAALFMDDPEDDSVPRKEDL
Ga0256364_1048085	Ga0256364_10480851	F102614	RVSIAKLQAALMLVSGLAFTSSSISSAVPPTTTGASIVTSQNACVWWYEGFPSSISLSAGDGVKYEGLDLELTDTDEPSIKLYISGNSVEGEPPAGNYDSNTECTWYRTALIQGIEVLVDVDGTAVSSTDAGLAFDYTDLLNGDLPTALEGLNITNTLDVTCDGYWSSTAEIQLNTTSVGANVATAGASNPPKTKLADADSDRCAVELDYSVVVPGDKLPESPGTATTFTLPSIVWTVTADPTVL
Ga0256364_1048595	Ga0256364_10485952	F004323	MPRVGFRRLEGMAEPASANHSPVTRDYPSRALSDVFQAAALR
Ga0256364_1050327	Ga0256364_10503272	F067528	LFELDFFELAQLGGYEQNSVSIALKPLYEGTFFKLWSGGNREKVNQINSLSVAVERLKI
Ga0256364_1050466	Ga0256364_10504661	F014949	KLGYKWMELPRVISIRISDDYFGGMPWDAIKHDKTLKAQFYRVVEREYPQFVCYPRGRLPIPVDVPYPTKRGQQRFFKGI
Ga0256364_1051072	Ga0256364_10510721	F034901	KQHMNTRSFAGIYARKLRGPSRFIWTLDTLRIIVRGLFQFHRCGPNRVSLDAIAPHLRALVCDRVKSIVCDSHSNPDFAEHYFERICARWICLPSLRAVLLKLKECDSYASLVGSTSATYDSLRADGFMSRLAYDAFDSEITQLHFSHPGCHLHRLPAIPRPCARPSMGSCFYCGEGLIDKIDWNCFPNCECIGYEGGVDEVLVCSSCVEEMADE
Ga0256364_1051078	Ga0256364_10510781	F089936	HNRKAYFMKKALIGMAAGAMALGASVVPASAGYGEDNLWDGIAGTDGESTDNTPAAPLCDDGNDDIFEALVITGGWAKRLDTDGNGEARYTVFQPKDVVLDGLLGALGLEISDLADQPSVVASILADHIANGSFDPNELEDTDLTRITMRSGFVASIFGPGEQLSGPRSVPGGAFIAGAQIIDAAQYDNGWLYCILGVIDSTPQVPTEGLNSQDTPNDGTPGGTNSLPDTL
Ga0256364_1052017	Ga0256364_10520171	F089936	KVHTMKKAIIGMAAGALALGASVVPVSAGYNGVDNLWDGIAGTDGGSTDDGAQESDNPLCDDGQDDIFEAMVLTGGWAKRLDTDGNGKPRYTVFQPYDAVLDGLLDALGLSIADLNDQPATVQAVLADHIANGSFDENELEDTDLKSITMRSGYVASVSTATGDLVDQVVTPGRDIYVNVYIAGAFIDDGEQYDNGWLYCLAGFIDSAPLETHEGLNSEDTPNDGTPGGTNSLPD
Ga0256364_1052388	Ga0256364_10523882	F085384	MSYIIENITTKEVTTKFGPKPAYTVHAGGERFSYGFKKPTFKIGDTVDFQYTENTYGKNIDMASVRLLAKGEGAPAPVGAVAGVSKPSYSPPSKVFPIPPLHGDRAIVRQNSITNAVKATDNYLRGEDVTPGSIEEYADFVIEVARKFEAYSCGDLDLAAAEEMTK
Ga0256364_1052471	Ga0256364_10524711	F060853	NLYLQPAPWRKWMQTREEIIQDWKAGKDFRIESGPYCSIRDIEYLRSSYNRIYIIHDRGSIEV
Ga0256364_1052544	Ga0256364_10525441	F080126	ASAQCAFDIAPAKGVKGSMVRNYAPCPGTESLGVTNSETEGGTESCAPVYPYKGAAVAATLYSYGPKGKCDVQTKATLVADCSTVTNGAGDLLGLGAAPCHVTYVKSKCSDILGTDGSTPIDGNLDTGWTLATLTRATFNDASNGDMTVIDFPVTFQFGTPKKGKIILKANSAEVLKPMVGVANADLPACTSLEIVDVTIKAPGGLPFAKLGGATLPEAP
Ga0256364_1057302	Ga0256364_10573021	F089936	MKKALIGMAVGAMALGASVVPVSAGYGSDNLWDGIAGTDGGNTDGGPTEAFCNDDQFDIFEALVLTGGWANRLDTDGNGKPRYTVFQPVDLVLDGLLDALGLQISDLNDQPAVVAAILADHIANGSFDPNELEDTDLKSITMRSGFVASVYGPDEQLGGPRTVPGNAFIQGARITAANQYDNGWLYCILGVIDSTPQVPYEGLNSQDTPNDGTPGG
Ga0256364_1062111	Ga0256364_10621112	F017444	LLLFLKPHQSLDAKVRELSHQAIDEVLKTIGEIYEQEY
Ga0256364_1063400	Ga0256364_10634001	F087401	MRRQRGLVGVIALATLVSVGGIASTASARVTTEESASILVFPKVVADGNRDTIIQITNTSNNMRHAHCFYVNAAPTDPDRPISLNESDYNPPLWTETDFDIWLTKQQPTHWVVSQGRRFDPTDATCLNAANNSANNCDPNTSGTGDADCCDAGFDPGRIPPTAPDFIGELKCIEVDASGYPVPGNSLKGEATIVE
Ga0256364_1065929	Ga0256364_10659291	F023359	KTSQAFVVIVLVVSFVLTVLLTLFQLDRVRNWFIFSIGMSFTRIAITLLAALVLVSSVIAFLSFLGLPQAFKDEIPNCVDGPCREFSNSIKLSDLIEVQGADTYSLVNTRTWGPVEGWFIVLGIIPVSVVLLALVVLNKFPLPIDSEASSGEAL
Ga0256364_1066363	Ga0256364_10663631	F025755	NKIVKTIGVLSLASLMSTSAFSQITISGYAEVGMITGSNKQTRSTAHSKGLGSEFLVTVAGKGTMSNGWTFSGYQNFDTDEVGNGVDAANVNPMTTRALEISPNKDFKLFYTYDGVYGGEIARTAIPVVTERPVDLTGLSGLAEFIDVTSGGHAVGLEALNLGPAGRFSIAYNPNLSTTQSASSDRVSSATNFLGGTGNNNISGYS
Ga0256364_1069327	Ga0256364_10693271	F063745	LKPNQQPQTPTKLSPRFKSLAKECGFVFWNSEPHGPGPGNIDWSCDYTSEFEHYSRELVNWTCELMRQEIVRDYLFKASKNTYQHLVVQD
Ga0256364_1071131	Ga0256364_10711311	F000240	AKLLILACLLLGAFSVEDKYFFTGGTPGYIPTSTPFDNPKTLTERTPTIPNAPDCSVRPQTVIEIQRMRESASRIAQMIEAEVMIMNKRKAFVEQMTTYLNDRIRELNKVKSELAEETRWIEVSTNRIQELAEREKLIKMQDILACLNNGKQEMSSESQSQTSTISSLQAQSKAVEARINEIKKKIDAAQSSKGGKGGK
Ga0256364_1071575	Ga0256364_10715752	F047008	MKMTKDQKTCRKLWLEHVRESGGIVHTRPPQGDENGFCLVAMPCAYNSRHAKFYDVSFAWCADNDQFDRKVGEFIALDRQMFGQTTKLPGYIIDNM
Ga0256364_1073005	Ga0256364_10730051	F015184	LHEQHSLLASTSLKNGNGWATLGAHIAHGQHSTFGTQFGFSHTNSHFGFGQAGLWHFQSHLGSSQTASHSGFGAWQ
Ga0256364_1076887	Ga0256364_10768871	F020340	LEASGSVLDANLLGSKGLFLSSGARTFADLGLQGDAGTHFRLRFSYNSLTVESNEFNVKPNHMHVSVHPSDGQYSAGASKADIGAGITVQARDGGNNVLTGADNTNAGSDTVVVTVLEASGSVLDANLLGSKGLFLSSGARTFADLGLQGDAGTHFRLRFSYNSVEVDSNEFNVKPHHMHVSVHPSDGQYS
Ga0256364_1077898	Ga0256364_10778981	F023359	VLTVLLTLFQLDRVRNWFIFSIGMSFTRIAITLLAALVLLSSVIAFLSFLGLPQAFKDEIPNCVDGPCREFSNSIKLSDLLEVQSGTTYSLVNTRTWGPVEGWFIVLGIIPVSVVLLALIVLNKFPLPIDSEASSGEAL
Ga0256364_1079353	Ga0256364_10793532	F000370	MSYKSDVKPVSTSATSAVLYTGPTRLRGFMIQSTGVAGTAIINGLANASTVSSSTNTQVYMVVTVGAGQTETLNIPEDGVLYAARNGTGIVDGIGVTANSSALNITLFIDK
Ga0256364_1079887	Ga0256364_10798871	F082176	FSIDAGTVQFVPAVSVVKISPSAVQAGVKSVLEIEVDVDCDCRAGLECRLGQARAPAVCSAGSRSLRCTIVPVGAGVRAFALMMDGQALSRSTVHVNVYESLITNIVIRPSAVDSSGGALVTVASSACASGPGLSGGMVVRFGEDGTSVFCPYPVADGAITASCAVICTAPPALSDVETVYVWSDAS
Ga0256364_1080632	Ga0256364_10806321	F020528	ADQEQMDMMSTNLTNQESIFQDAIKRNTIYRAKYKLTGYNLNIKFHPIAQHFWICDPTVPEMKDQPFCGYYDPMTIQEAMDLYPGINLEEFERHAEYNMNGAYQAGSVLNNLAIHARDSVPIMGIPVSSASSADPDSRQVSVVTVWNKYDIDGDGELELVEIIYSGTYIISAREVEFIPVANMCPK
Ga0256364_1082459	Ga0256364_10824591	F100451	NERIAAQPPGPFQEYGLDPADKFAETVMELCCHILGDMILGCESPVDMQHRFPTLIGAKALTAKDRYDIATADLWIHGDDFMFEIVPEFQEMQRQEFAAAQAEGMSAQDIEAKYGKPIPDWTYESTQEERAFMKEVPQKEPNEQLKVPAIQVNDSQEADPGFEIGHHWWG
Ga0256364_1082943	Ga0256364_10829432	F095362	FIEWFYNKSFPSYDSKRNRNGFLEEMLDLNKIDHDALQYWIQEAFHQGAKAQRELDSEK
Ga0256364_1082996	Ga0256364_10829961	F005668	MLTQLAEFDLERDYAAPYTTSRNTYLQAAAALKLATGPYKAARDAYVAATATYTKSLYE
Ga0256364_1085811	Ga0256364_10858111	F061852	YVTKTGEKPVKKDVTADAIGAILRLSENDIESLTKANKSALKAIFDALANSKPL
Ga0256364_1085813	Ga0256364_10858131	F059099	RGKDRQMPADHDHPDTIDPQEALRLLDEARSRIRMVIWAFHGMHQDMSVLTVDDISDAEHILTEVLENALNPSVDALGEMLGSGPIESATTH
Ga0256364_1085959	Ga0256364_10859592	F095362	VNIPVQKKFIEWFYHKSFPSYDSNRNRNGFLGDMLDLDKIDHDALQYWIQEAFHQGAKAQRELDSEK
Ga0256364_1088354	Ga0256364_10883541	F036560	MFQITTELYGKHAAALYAQASDFNKTARFYYMKAEDAYFLANAQASYDDFTRSRKQWDYFYHRK
Ga0256364_1091622	Ga0256364_10916221	F016245	SFTPVDAVPNDGRFVLTLVGAGFACSAGTTVTFVSPADGSGYVSISAGLVLTLQLSGGTFSAGQAVEFVFGGVTNPNSNQSHISNIHAATLNAPGNIVGASVTGYLPAIVNGLGALVVGLSNTVRQGTGIVMTVSFTPVDAVPNDGRFVLTLVGAGFACSAGTTVTFVSPADGS
Ga0256364_1091691	Ga0256364_10916911	F016245	PAIVNGLGNLSVGLSNTVRQGTGIRMSVSFTPVDAFPSDGRFIITLVGAGFACSDNTAVTFVSPAGGSGSVSISAGLVLTLQLSGGAFSAGGLVRFWFGGVTNPAMNQSQVRDLAAVTTTSSGEVIGGSVTGQLPAIVNGLGNLSVGLSNTVRQGTGIRMSVSFTPVDAFPSDG
Ga0256364_1091722	Ga0256364_10917221	F100446	TGGKSFSFSTFIKQEGERLQGTIARKGNEWALESNDDGDVIFTSNGVSCKAPKVIGRKYKNIVAVSSATEQKIKIVVDGKEACSVAGKLFTEPLDAPLNLGSISDHIQAKVAKPTYIASGVRSNEIGLFSKEKPECIGA
Ga0256364_1091782	Ga0256364_10917821	F016245	VFNAGGVVQFWFGGVTNPSSNQSQVNNLEAVTTLSTGDVVGGSVTGVLPAIVNGLGPLSVGLSNTVRQGTGIRMTVSFTPVDAVPSNGRLIVTLVGAGFACGANTAVTFLSPAGASGSVSISAGLVLTLQLSGGVFNAGGVVQFWFGGVTNPSSNQSQVNNLEAVTTLSTGDVV
Ga0256364_1092257	Ga0256364_10922571	F068878	MTEKAKKWSDANVDRLMKLVGSQRPVSAATVENAANQLGEEFTARSVASKLRQLEVEVASMAKEKTSAFTEDEGAELAEFVISNSGELTYKQIAEQFMDG
Ga0256364_1092538	Ga0256364_10925382	F029333	ESFAIVTTICVLVGVATEPVAPLPLICTLGDPALAKKPDGYASVMLLPAASAPPAVVVNENVAAAPTLPATRSDAAIANEALVT
Ga0256364_1094708	Ga0256364_10947081	F082153	LELPAVAAPMVRPVTVTVTPLLAATAALVVTTIWVLVGVATAPPLTPLIVAAGDPVLEKKPDGYVSVMVPPIASAPPAVVVNEKVAAAELLPATRSDVAIANEGLVT
Ga0256364_1097702	Ga0256364_10977021	F100451	MELCCHHLGDMILGCESPVDMQHRFPTLIGAKALTAKDRYDIVTADLWIHGDDFVEKVVPELQAQQREEFAKAKAAGMSDPDIEQKFGKPIPDWTLESTQDERAFMKEVPGQEANPTLRVPAIKINDQQPADEGFEIGHHWWG
Ga0256364_1098994	Ga0256364_10989942	F095362	VNIPVQAKFIEWFYHKSFPSYDSNRNRNGFLNDMLDLNKIDHDALQYWI

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300026444: Metatranscriptome of freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Atlam_RepC_8d (Metagenome Metatranscriptome)

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences