Sample 3300030668

3300030668: Metatranscriptome of Jellyfish Cassiopea xamachana and symbiotic dinoflagellate Symbiodinium from Pennsylvania, USA - 12_T2E_StrKB8 developmental time series (Eukaryote Community Metatranscriptome)

Overview

Basic Information
IMG/M Taxon OID	3300030668 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0128996 \| Gp0213229 \| Ga0187737
Sample Name	Metatranscriptome of Jellyfish Cassiopea xamachana and symbiotic dinoflagellate Symbiodinium from Pennsylvania, USA - 12_T2E_StrKB8 developmental time series (Eukaryote Community Metatranscriptome)
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	59328559
Sequencing Scaffolds	29
Novel Protein Genes	39
Associated Families	31

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	4
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium natans	2
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	9
All Organisms → cellular organisms → Eukaryota → Sar	2
All Organisms → cellular organisms → Eukaryota	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium microadriaticum	2
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium necroappetens	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	4
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Choreotrichia → Choreotrichida → Strombidinopsidae → Strombidinopsis → Strombidinopsis acuminata	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → unclassified Symbiodinium → Symbiodinium sp. CCMP2592	1
All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Chrysophyceae → Chromulinales → Chromulinaceae → Spumella → Spumella elongata	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Metatranscriptome Of Upside-down Jellyfish Cassiopea Xamachana Infected With Symbiotic Dinoflagellate Symbiodinium From Hawaii, Usa
Type	Host-Associated
Taxonomy	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated → Metatranscriptome Of Upside-down Jellyfish Cassiopea Xamachana Infected With Symbiotic Dinoflagellate Symbiodinium From Hawaii, Usa

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	Unclassified
Earth Microbiome Project Ontology (EMPO)	Unclassified

Location Information
Location	USA: Pennsylvania
Coordinates	Lat. (^o)	40.7982	Long. (^o)	-77.8599	Alt. (m)	N/A	Depth (m)	0
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F000023	Metagenome / Metatranscriptome	5736	Y
F000070	Metagenome / Metatranscriptome	2710	N
F000085	Metagenome / Metatranscriptome	2467	Y
F000241	Metagenome / Metatranscriptome	1481	Y
F001300	Metagenome / Metatranscriptome	727	Y
F001767	Metagenome / Metatranscriptome	638	Y
F002609	Metagenome / Metatranscriptome	543	Y
F003025	Metagenome / Metatranscriptome	512	Y
F003866	Metagenome / Metatranscriptome	464	Y
F004604	Metagenome / Metatranscriptome	431	Y
F004725	Metagenome / Metatranscriptome	426	Y
F014624	Metagenome / Metatranscriptome	261	Y
F016665	Metatranscriptome	245	Y
F017489	Metagenome / Metatranscriptome	240	Y
F017832	Metagenome / Metatranscriptome	238	Y
F018723	Metagenome / Metatranscriptome	233	Y
F034578	Metagenome / Metatranscriptome	174	Y
F034936	Metagenome / Metatranscriptome	173	Y
F042152	Metatranscriptome	158	N
F043954	Metatranscriptome	155	Y
F048097	Metatranscriptome	148	Y
F048099	Metatranscriptome	148	N
F057086	Metagenome / Metatranscriptome	136	Y
F057101	Metagenome / Metatranscriptome	136	Y
F074387	Metagenome / Metatranscriptome	119	N
F074901	Metatranscriptome	119	N
F074902	Metatranscriptome	119	Y
F085734	Metagenome / Metatranscriptome	111	Y
F093247	Metatranscriptome	106	Y
F098648	Metatranscriptome	103	Y
F104400	Metatranscriptome	100	Y

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
Ga0187737_102030	Not Available	588	Open in IMG/M
Ga0187737_102588	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium natans	787	Open in IMG/M
Ga0187737_103563	Not Available	613	Open in IMG/M
Ga0187737_105902	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	504	Open in IMG/M
Ga0187737_106884	All Organisms → cellular organisms → Eukaryota → Sar	1139	Open in IMG/M
Ga0187737_107194	All Organisms → cellular organisms → Eukaryota	582	Open in IMG/M
Ga0187737_112856	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium microadriaticum	572	Open in IMG/M
Ga0187737_122442	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium necroappetens	1113	Open in IMG/M
Ga0187737_122738	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	523	Open in IMG/M
Ga0187737_125373	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium natans	679	Open in IMG/M
Ga0187737_129325	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	512	Open in IMG/M
Ga0187737_130286	Not Available	938	Open in IMG/M
Ga0187737_132080	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Choreotrichia → Choreotrichida → Strombidinopsidae → Strombidinopsis → Strombidinopsis acuminata	1556	Open in IMG/M
Ga0187737_133592	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	611	Open in IMG/M
Ga0187737_137683	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	622	Open in IMG/M
Ga0187737_139107	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → unclassified Symbiodinium → Symbiodinium sp. CCMP2592	1168	Open in IMG/M
Ga0187737_146918	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	563	Open in IMG/M
Ga0187737_161074	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Chrysophyceae → Chromulinales → Chromulinaceae → Spumella → Spumella elongata	1404	Open in IMG/M
Ga0187737_162874	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	681	Open in IMG/M
Ga0187737_169128	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	594	Open in IMG/M
Ga0187737_171081	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	634	Open in IMG/M
Ga0187737_174081	All Organisms → cellular organisms → Eukaryota → Sar	932	Open in IMG/M
Ga0187737_176056	Not Available	694	Open in IMG/M
Ga0187737_176763	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	680	Open in IMG/M
Ga0187737_179011	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium microadriaticum	514	Open in IMG/M
Ga0187737_180114	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	610	Open in IMG/M
Ga0187737_180645	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	800	Open in IMG/M
Ga0187737_183161	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	634	Open in IMG/M
Ga0187737_187706	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	882	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0187737_102030	Ga0187737_1020301	F016665	MESMKRSPTFLVGTVQQKDILGEFQKREQHYTEEYSKNKPLCFSARAFQQPHPAKVRMGYKDADATLTSPMLLGVCDGVSQLEEFQMDPSLLPNELLRTCEELAMLQLMPDTNIAPQDQYRGPISLLKEAYQETTSYGSTTVLLAALDNSTRIHGKLHPMIAVLSIGDCELLMLRRTNGRQSELE
Ga0187737_102588	Ga0187737_1025881	F048097	MAHGNLSDLIFLALVGVTAQWLAYPATLFEDLGPLKAQFKAPSPDMDALIKFGAGLLLFLGMTFSAVSWNPVNGKMAGFGAFITMGYFIYSVFKADGEVFLPRLFYVYAGVILLGALHIFAFPSNPLPPKTPEVKNNHGNFSDLIAISLLGVALSWYFYPEHLFQDLGPLKAQFRSQSADLATLIKFVAGLMIIISLMLSGVKWNPINGKLSGLGGFVAAGYTAYSTYSADKEVFLPRLFYVYSL
Ga0187737_103563	Ga0187737_1035631	F057101	DIEKLYETLERARSPTGLLTVKIGEMESGRFIGKVKPAKEVERLARKFKLDDPVASRLTELIHRRKKENEIDRMHKDLNTVEQHLKYCKRANAMATLLVGKLLEGEVEELPDLSDAEKVMDKYRLDDDAKSKLREIIEKRAEDKDEILVKIKKHLDNCANPSSMLCKIARPLIDNEPLADPPDRPQKGGEKGDGKGGGKGKDKN
Ga0187737_105902	Ga0187737_1059021	F074902	QIKNAGIDPQVSELAEYHGLDDRATRALDEEMKKRRATFESDLQALWVGLEGAKNPSGMLMMKLKDMRMGTFKGMTALDKQIHDFAKRNRLDAQAAVKLAEVLHNRDDIEGDLSKIQKHLERSNKPSSLVMMMLRDLREGKPIKEPGYAPAIGSKVHEKELKASHKE
Ga0187737_106884	Ga0187737_1068841	F002609	PEQMIYMWNVLTAIFFTQVLMVIGYCAALATFPDYWWTCTLCFGIPFSYIAIQNIYIDHDVMHGATFPVYEWQRFLTHPFADFFSLPWEEFVLEHNRHHASTVDLLIQGEFGWDPEEFHYALQQWAGPWGSNWYKYLLTVPFIPVIHFFGLNDTGSLFALEWWMHFPDEGAGGKCNKEFWSKWIPRRIKHNAFVLGLWACVWLLGTYPLGRPLSEGWRFMLTVSVFARIGYSAAWMFITNFTHSLPWNEFLAQDPGRTWPVLHNIMAMVLGGKHRWNEMLFHDVHHAFPNAVGTLSQRGRFHGWEKVHDAAAEVLHRGLWKPNGDEETQMQKTQKKRSLMMKQGK
Ga0187737_107194	Ga0187737_1071941	F043954	SPPDATKKFTGPDDGNPQGWNRTRRCDQDQMPRCGLCEGVGGMAYGDANDKIIVTPCQPLANASQVDPSTVAKPLYPKKFTIRRKDGKQGGYSDTLIGWKTDPFCFGFFPQNDSTKPMCYRSEDAYVKYYDIDREAQRAEYTIHNGGLFAAFPNITSIILHVNEQMWIQNDLWGVKQCICANPSGNHCTNPPC
Ga0187737_112856	Ga0187737_1128561	F034936	TRSVRLEPSFPQRPKSPRRCLMAMAKSNSEAGADFVKNSKVGSASGFMVVAGSILAIPHKTGTKMKIQTAPRFNGASEYNDSFKEIPHCYASMDKKPLIPYSANATRSRLAVEDAPVPLKNASTIAFQDRFCVHNRRFVTTHKNYYTGEMPDMRSNPGMIADSTKLKRMLQEK
Ga0187737_113714	Ga0187737_1137141	F000241	SRKPLPASSCAPPAYLAMARPTLLPAVAVLAGVYSLASFCFVGSPQTPRDCSRVPARVSAEYLERCGPKDSDVPFSGAAASGPGATVEFKKRPFGILRYQPGEGMKGAMAMEIIPKSRYPGDPQGQAFAAGIQSGWVVQSINGMNVQNEDFGKIMDMLDDEVADPRFSKSTALALEKQGGRMAEPVEAPLSVVFSSIPGYVYKGAQLTEDGQDGFAR
Ga0187737_118876	Ga0187737_1188762	F014624	DGSAQSMMQWFILFTTSSGMLEYVLVGKAKGGAMTFSVFGVCLALVKVMISCYVAVLNTKALKRDSNPFPVQFSCLKVSWAMASLVYMVVKDGILGDGMFGEWTHRTVVLVFCGFILKTLFNQYLLKVLDAIWKNISEAIGVILVYFGRVMFLGGKYDPTVFNAGVTVVLACIAYVLSKEAKAKKNEVGDELNPNMYPDLTTSLLRHRRP
Ga0187737_122442	Ga0187737_1224421	F000023	LPSRKTGGDAQIMKKVATRLQDFESQITAQLANLQTDFDKKLSHVNRGAAATKPVDGAGGAAGLDTMAEDLDQLKYDVGELKDLLGNNKGEVNHIRRIVLACERDMEDFTAAMDAVNVDLDEMRARVDATHSIITSRQRVEATMTAEISTMRLDIGDIQEALKNHDSWMEDVSNTLQQMQEKEENLTEDIINLKNEMNTKLDTKVDNVAWKEANDDLDAAIKTVRDMVSSLRLDVDARRRKVDEILATIRHDITAVETNLEESKAKITSDTDQAVNALNGRIDFTNKDLAATQESLHTTQNSLSDCFNEVAVVRSDLERNVADTEARLKNDIRQKQQEAFEKIGAVEQQAELRSAEASRRLGALDLRMSG
Ga0187737_122738	Ga0187737_1227381	F018723	GGKEPFVQQFELKDVYPHFCDRKTKLLPLADVPYVLRAMGLTIYSEEEKSIREQVEKVDGMGKPVSMKTMQSWIEEHGSKYVKSYDDAYSAVGTLCHEGIIGDKSGRIQVPFLRHLVSEVGDKIKAETFDKIMKGGDSAVGTAIKGDSCPLDEFLNFLQK
Ga0187737_125373	Ga0187737_1253731	F001300	FNGYGYFYVRLYWTGFGLPANIVEEYILLSVLLHVFVGLKRTWDMKLALVQTQGINVLNLAISGLMLLTFMTIHLFQFRFGDTDQFGPYYIRPPPYLINFWGISSLNLFWTSDASVEKVGVRDIYALEFQIFKNPLWSFFYIFSVFIFMYHACIGWKKVTPVLGIPRGHIWRVELIGYGIMIVMGLVYISFPLYVMATKPFGGYEMSIQIPGREE
Ga0187737_129325	Ga0187737_1293251	F004725	VKPTFQFSAAIVPMATSAPLLGKQGKAAHSKASIFYGADEYLEELKKKYEHDHEIAALKNALPGEGDPNAAGVAQSNDKMLSVQKNDENRSLKTNRLFPTPNKPDPMPQNLAFLFTKITPEQMIYMWNVLTAIFFTQVLMVIGYCAALATFPDYWWTCTLCFGLPFSYIA
Ga0187737_130286	Ga0187737_1302861	F074901	VKPTFQFSAAIVPMATSAPLLGKQGKAAHSKASIFYGADEYLEELKKKYEHDHEIAALKNALPGEGDPNAAGVAQSNDKMLSVQKNDENRSLKTNRLFPTPNKPDPMPQNLAFLFTKITPEQMIYMWNVLTAIFFTQVLMVIGYCAALACFPDYWWTCTLCFGLPFSYIAIQNIYIDHDVMHGATFPVYEWQRFLTHPFADFFSLPWEEFVLEHNRHHASTVDLLIQGEFGWDPEEFHYALQQWAGPWSSNWYKYLLTVPFIPVIHFFGLNDTGSLFALEWWMHFPDEGAGGKCNKEFWSKWIPRRVKHNAF
Ga0187737_132080	Ga0187737_1320801	F001767	MATSAPLLGKPGKAAHSKASIFYGADEYLEELKKKYEHDHEIAALKNALPGEGDPNAAGVAQSNDKMLSVQKNAENRSLKTNRLFPTPNKPDPMPQNLAFLFTKITPEQMIYMWNVLTAIFFSQVLMVIGYCAALACFPDYWWTCTLCFGIPFSYIAIQNIYIDHDVMHGATFPVYEWQRFLTHPFADFFSLPWEEFVLEHNRHHASTVDLLIQGEFGWDPEEFHYALQQWAGPWGSNWYKYLLTVPFIPVIHFFGLNDTGSLFALEWWMHFPDEGAGGKCNKEFWSKWVPRRVKHNAFVLFLWALVWLLGTYPLGRPLSEGWRFMFTVSFFARVGYSAAWMFITNFTHSLPWNEFLAQDPGRTWPVLHNVMAMVLGGKHRWNEMLFHDVHHAFPNAVGTLSQRGRFHGWEKVHDAAAEVLHRGLWKPNGDEETQMQKTQKKRSMMMKQGK
Ga0187737_133592	Ga0187737_1335921	F048099	PSENPWSPGYGLRAATEGTEAEMSFAAGLTKIVQSKQSEVANREKIAESWKATEAKLLDAAVELFKNRCIKEAELEKCEATISFEVITREIPDFPKRILTDSTYFVDSWPSGTSAESWFYATRGVNSAFSQGAPILFAEVLQASLPQFVNRVKELGFSECNHEAGTWKVAVRWPRPDDDAPAEKKKKRRKD
Ga0187737_137542	Ga0187737_1375421	F004604	GLAAAGLAVGAHAGLAVAFRARAARKAETKPAEKKYVETVADERLFEQVYLQYTSEYLKGPLYWHPDKLQGWLPDYPGTPMIKEGKYTSHVIGNLKAFSSNELAFLSMLFFGVGLYGNLQFNFYDPQWAKVDAGGFFNVSYIVESFLLPISFFMHIACYIQRQNGK
Ga0187737_137683	Ga0187737_1376831	F017489	GTYPLGRPLSEGWRFMFTVSFFARVGYSAAWMFITNFTHSLPWNEFLAQDPGRTWPVLHNVMAMVLGGKHRWNEMLFHDVHHAFPNAVGTLSQRGRFHGWEKVHDAAAEVLHRGLWKPNGDEETQMQKTQKKRSLMMKQGK
Ga0187737_139107	Ga0187737_1391071	F001767	MATSAPLLGKEGKKAAHSKASIFYGADEYLEELKKKYEHDHEIAALKNALPGEGDPNAAGVAQSSDKMLSVQKNNENRSLKTNRLFPTPNKPDPMPQNLAFLFTKITPEQMIYMWNVLTAIFFTQVLMVIGYCAALACFPDFWWTCTLCFGIPFAYIAIQNIYIDHDVMHGATFPVYEWQRFLTHPFADFFSLPWEEFVLEHNRHHASTVDLLIQGEFGWDPEEFHYALQQWAGPWGSNWYKYLLTVPFIPVIHFFGLNDTGSLFALEWWMHFPDEGAGGKCNKEFWSKWVPRRIKHNAFVLALWTCVWMLGTYPLGRPLSEGWRFMFTVSFFARVGYSAAWMFITNFTHSLPWNEFLAQDPGRTWPVLHNVMAM
Ga0187737_141997	Ga0187737_1419971	F104400	GDFAGNVCAACLSAPVHQLYGYTVTTPELRTLPAAEQRERMVSFLKNQYLDTSNGRTRLSGLVPRDLFMRSMYVAVAYTMYSTVERTLVANWPQ
Ga0187737_146918	Ga0187737_1469181	F003866	AENQPKLPKNTTYRAMGDDGDVRLTTVSKDGEKLGNLIPAGSMSSTEGKSAIPGKWKIPGVQEPVELKVSGSSVKSVQQPFGNQPFLGEIEEGEKMLGLHVTLGGFPMKAWMKKEGQQTVLTFSNGGRWSKL
Ga0187737_159564	Ga0187737_1595641	F000023	ATKPVDGAGGAAGLDTMAEDLDQLKYDVGELKDLLGNNKGEVNHIRRIVLACERDMEDFTAAMDAVNVDLDEMRARVDATHSIITSRQRVEATMTAEISTMRLDIGDIQEALKNHDSWMEDVSNTLQQMQEKEENLTEDIINLKNEMNTKLDTKVDNVAWKEANDDLDAAIKTVRDMVSSLRLDVDARRRKVDEILATIRHDITAVETNLEESKAKITSDTDQAVNALNGRIDFTNKDLAATQESLHTTQNSLSDCFNEVAVVRSDLERNFADTEARLKNDIRQKQQ
Ga0187737_161074	Ga0187737_1610741	F001767	SAGITCLRKFGFAEVGMATSAPLLGEKKQAHSKASIFYGADEYLEELKKKYAHDHEIAAMKNLLPGEGDPNAAGVAESKDKMLKVEKNNENRSLKTNRLFPTPNKPDPMPHNLAFLFTKITPEQMMYMWNVLTFIFVTQCTMIVAYCAALAMFPEMWWTCTLCFGIPFSYVAIQQIYIDHDVMHGATFPVYEFQKFLTHPFADFFSLPWEEFVLEHNRHHASTVDLLIQGEFGWDPEEFHYALQQWAGPWSSNWYKYILTVPFIPVIHFFGLNDTGSLFALEWWMHFPDEGAGGKCNKEFWSKWVPRRVKHNSFVLFLWALVWLLGTYPLGRPLSEGWRFVFTVSFFARVGFSAAWMFITNFTHSLPWNEFLAQDPGRTWPVLHNVMALVLGGKHRWNEMLFHDVHHAFPNAVGTLSQRGRFHGWDKVHDAAAEVLHRGLWKPNGDEETQMQKTQKKRSLMMKQGK
Ga0187737_162874	Ga0187737_1628742	F017489	CVWLLGTYPLGRPLSEGWRFMFTVSVFARIGYSAAWMFITNFTHSLPWNEFLAQDPGRTWPVLHNVMAMVLGGKHRWNEMLFHDVHHAFPNAVGTLSQRGRFHGWEKVHDAAAEVLHRGLWKPNGDEETQMQKTQKKRSMMMKQGK
Ga0187737_166845	Ga0187737_1668451	F000070	LRSAESSRRLGALDLRMSGVQGGLGEQKRDILKLREEVNGLTVKSASHEVDIQKGSDAVKKMEKQRNLDGQNFKAQLDAIHDVLDTKVNEKPFEDVKHCVSSLTKGVVKFAQVVGVFPGPRFDDAEGGEGAEADVELLGWEESAETLSFRVDKAWRQRCSQRFRNILDMIAKKA
Ga0187737_169128	Ga0187737_1691281	F017832	KTMASGKDGKAPVKVPTTFSEMFLFNAAVMGFAESSWMTLILDQFHNIVTNVANSYRLQEECDVLTLVLDKHEGQVHLSEFKAVMLSSLRSLVPKEWDSEHEVAWNWLWENVERMLKSHMGKPHSQEKALERFISGLSPDDVTQLRRHIYQKFFQVAPAGQDHFKQSTTRLYFIADKIFEMTMEMFHSPRMMVEDISA
Ga0187737_170253	Ga0187737_1702531	F000085	CTGTPSALTGHSAGVMLRSLPRLMWIGIVAAQNWPGCQEQNTVIRNAGQALFTNLQGYGATIGCFLDDCMSSDKFVASEIESCAKVCFSLPDCKFWVWGTEEGEQKCWFRTGEAGREAGEGWVSGSKACAPPGTTVMPLGNSECWAEGFGYENCCEAKFGPNGNAQCWDGVYNYDRCCFPKEEL
Ga0187737_171081	Ga0187737_1710811	F034578	IFSTMLCHLLYALAVMVPAHPKEAAQSVTVRGAAFAQLIKVQHIVAQQIQPKALYDPADAGRAKLLLYVRATACVRSALQSIMASWFAADFGARFVISEEGGQDFLRYCCKHITQAYNHKTAMTRVLGSPWERIMLSQGPTSTIAELLIVVCSSDSNLV
Ga0187737_173604	Ga0187737_1736041	F085734	ELKDLLNGAKHDTDHVKRIVLACERDMEDFTAAMDAVNVDLDEMRARVDSTHSIITSRQRVEATVTAEISTMRLDMGDMQEALKAHDAWMEDVSQSLQEAHERCQQIGLDINDVNQQMQVKLDAKTDIVSWNDMNDDIDASIRTVRDMASSLRFEVDNRRRRVDEELARLRSEMTSMDERVMAKTGDIQRQADEKHAAVSGRLEEGAQHRRELEATLGRHAETHNLIQGQINGQRDELDTRLGFLESSMKKQGEELQKSAHDRMDGMERYQSTIAKESGKHLNALDLRMAALQGA
Ga0187737_174081	Ga0187737_1740811	F003025	PVIHFFGLNDTGFLFALEWWMSFPEADASGKCNKEFWTKWMPRRVKHNAVVLGLWACVWLLGTWPLGRPLSQGWRFVLPVTCAARVGFSLAWMFITNFTHSLPWNKFLENDPARTWPKLHNIMALAVGGKHRWNEMLFHDVHHAFPNAMGTLSQRGRFHGWKKVHDACVEVLARGLWKPNGDEETEMMKSQKKRSAVMKQGMAS
Ga0187737_176056	Ga0187737_1760561	F003866	SPSPRVSKAESSAAMGDDGDVRLTTVSKDGEKLGNLIPAGSMTAAEGKSAIPGKWKIPGVQAPVELKVSGSSVKSVQEPFGNQPFLGEIEEGEKMLGLHVTLGGFPMKAWMKKEGQQTVLTFSNGGRWSKL
Ga0187737_176763	Ga0187737_1767631	F017489	VLSLWACVWLLGTYPLGRPLSEGWRFMFTVSVFARIGYSAAWMFITNFTHSLPWNEFLAQDPGRTWPVLHNVMAMVLGGKHRWNEMLFHDVHHAFPNAVGTLSQRGRFHGWEKVHDAAAEVLHRGLWKPNGDEETQMQKTQKKRSMMMQQGK
Ga0187737_176835	Ga0187737_1768351	F098648	TSAAFSSAAQTRMSRRAYESGKANVGAEISDTDVQPPPPPVLECDEGCMTAIFDCIEEGCSVDALLKLDQKLADDEQRIADTVKELEGVQKTAFSPENAGTLAWLNNFLSRSGSLRGQLQALQGVKDSNFVQQIVKAASVAFGGGRPNDYPKVGVSPYSS
Ga0187737_179011	Ga0187737_1790111	F042152	HKRDILKLREEVNGLTVKSASHEVDIQKNSDAVRKMEKQRNMDEQNWKAQMDAVHDVLDTKVNEKPFEDLKHCTAALTRGVVKFAQVVGVFPGPKFDDAEGADQGEADVELLGWEECAENMSFRVDKAWRQRCSQRFRNVLDMVAKKADHSVLRLLQISQQHIESQLERVK
Ga0187737_180114	Ga0187737_1801141	F057086	MDMYEERPPEIFTGGYFDQANIVNQTEGLQDFRRRQEGHLIIADDRPLLVMSFGLKYQGPNPSKYKIEGKYDIPVGFKVIIKWEEDEIVFMTRQGTFGPEFQIVYLPQSPTPEDFTVFEWNANIAEIWDQFLTVIEGKEDRDMRLFNQGPWRTFGVTRDEVQMALKQGTDQKTIVDGILYCAD
Ga0187737_180645	Ga0187737_1806451	F093247	GILGRFENVRVKKSAKKTVTCDAATPEYLRHDFLKPQHLPIERVDEEANFIATSNINETRFHKGFHRRHQADIQQDAARLEHEAARDWARQERAAAQASAAHQLRDKCTFNILTGEGMGRECEFRHVGKKILNPYGSMQATFSEHDREERHRVKNSKHRFFEHPAPEKQVRAANLFNEGLQGTVRESAVLGYGRSGVSRTRARSCGVADNFAHLQALPPEPEYEAPHNGNASQIILG
Ga0187737_182751	Ga0187737_1827511	F000023	VQRSTGATKPIAGASAGVGTGLDTMAEDVDQLKFDVRELKDLLTNSKGEVNHIRRIVLACERDMEDFTAAMDAVNVDLDEMRARVDATHSIITSRQRVEATMTAEISTMRLDIGDIQEALKNHDSWMEDVSNTLQQMQEKEENLSEDMINPKNELTAKLDTKVDNVAWKEANDDLDAAIKTVRDMVSSLRLDVDARRRKVDEILATVRHDITAVETNLEESKSKLAMDTDHAINALNGRIDFTNKDLAATQESLHTTQNSLSDCFNEVAVVRSDLERNVADTEARLKN
Ga0187737_183161	Ga0187737_1831611	F074387	MTDRFYPVGMEADAENWKTTYEVMNEMRSFARSPYPPGTAIHQPGSRDHFGYSAPGPIASRLTNSELALTEDTDIPNPREHMAITRIQEPDDRRVFERHDVDEMLRTYNSPVAKATLSPSKPQSLAKTFSLPTIARRSEAPPKLSERNPVIKKLEDAHFSYFVPKNMQREHKDRLNTAQLSKLKKANMISFPFTGEGTGFRSQGSGANWWP
Ga0187737_187706	Ga0187737_1877061	F002609	WSSNWYKYLLTVPFIPVIHFFGLNDTGSLFALEWWMHFPDEGAGGKCNKEFWSKWIPRRIKHNAFVLSLWACIWLLGTYPLGRPLSEGWRFMFTVSFFARIGYSAAWMFITNFTHSLPWNEFLAQDPGRTWPVLHNVMAMVLGGKHRWNEMLFHDVHHAFPNAVGTLSQRGRFHGWEKVHDAAAEVLHRGLWKPNGDEETQMQKTQKKRSMMMQQGK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300030668: Metatranscriptome of Jellyfish Cassiopea xamachana and symbiotic dinoflagellate Symbiodinium from Pennsylvania, USA - 12_T2E_StrKB8 developmental time series (Eukaryote Community Metatranscriptome)

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences